RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 KRTAP6-3Q3LI67 103 aa6.27□□□□□ -1.41
PSEN1-206ENST00000553447 MT1LQ93083 61 aa6.27□□□□□ -1.41
PSEN1-206ENST00000553447 KRTAP19-3Q7Z4W3 81 aa6.18□□□□□ -1.42
PSEN1-206ENST00000553447 KRTAP19-4Q3LI73 84 aa6.17□□□□□ -1.42
PSEN1-206ENST00000553447 MUC12Q9UKN1 5478 aa6.14□□□□□ -1.43
PSEN1-206ENST00000553447 LCE3CQ5T5A8 94 aa6.13□□□□□ -1.43
PSEN1-206ENST00000553447 MT1GP13640 62 aa6.12□□□□□ -1.43
PSEN1-206ENST00000553447 KRTAP9-7A8MTY7 169 aa6.11□□□□□ -1.43
PSEN1-206ENST00000553447 LCE1AQ5T7P2 110 aa6.1□□□□□ -1.43
PSEN1-206ENST00000553447 LCE5AQ5TCM9 118 aa6.09□□□□□ -1.43
PSEN1-206ENST00000553447 SPRR2EP22531 72 aa6.07□□□□□ -1.44
PSEN1-206ENST00000553447 SPRR2BP35325 72 aa6.07□□□□□ -1.44
PSEN1-206ENST00000553447 SPRR2AP35326 72 aa6.07□□□□□ -1.44
PSEN1-206ENST00000553447 MT1MQ8N339 61 aa6.05□□□□□ -1.44
PSEN1-206ENST00000553447 KRTAP4-7Q9BYR0 210 aa6.05□□□□□ -1.44
PSEN1-206ENST00000553447 SPRR5A0A1B0GTR4 108 aa6.04□□□□□ -1.44
PSEN1-206ENST00000553447 KRTAP4-12Q9BQ66 201 aa5.97□□□□□ -1.45
PSEN1-206ENST00000553447 KRTAP4-3Q9BYR4 195 aa5.93□□□□□ -1.46
PSEN1-206ENST00000553447 MDN1Q9NU22 5596 aa5.92□□□□□ -1.46
PSEN1-206ENST00000553447 NEBP20929 6669 aa5.86□□□□□ -1.47
PSEN1-206ENST00000553447 SPRR2DP22532 72 aa5.85□□□□□ -1.47
PSEN1-206ENST00000553447 LCE3BQ5TA77 95 aa5.84□□□□□ -1.47
PSEN1-206ENST00000553447 KRTAP9-6A8MVA2 160 aa5.8□□□□□ -1.48
PSEN1-206ENST00000553447 LUZP6Q538Z0 58 aa5.75□□□□□ -1.49
PSEN1-206ENST00000553447 LCE4AQ5TA78 99 aa5.72□□□□□ -1.49
PSEN1-206ENST00000553447 KRTAP9-9Q9BYP9 154 aa5.67□□□□□ -1.5
PSEN1-206ENST00000553447 KRTAP9-4Q9BYQ2 154 aa5.67□□□□□ -1.5
PSEN1-206ENST00000553447 DSTQ03001 7570 aaKnown RBP5.66□□□□□ -1.5
PSEN1-206ENST00000553447 NDUFAF8A1L188 74 aa5.54□□□□□ -1.52
PSEN1-206ENST00000553447 KRTAP2-3P0C7H8 128 aa5.5□□□□□ -1.53
PSEN1-206ENST00000553447 KRTAP2-4Q9BYR9 128 aa5.5□□□□□ -1.53
PSEN1-206ENST00000553447 KRTAP5-5Q701N2 237 aaPredicted RBP5.47□□□□□ -1.53
PSEN1-206ENST00000553447 LCE1DQ5T752 114 aa5.46□□□□□ -1.54
PSEN1-206ENST00000553447 KRTAP20-1Q3LI63 56 aa5.43□□□□□ -1.54
PSEN1-206ENST00000553447 KRTAP2-2Q9BYT5 123 aa5.38□□□□□ -1.55
PSEN1-206ENST00000553447 KRTAP2-1Q9BYU5 128 aa5.38□□□□□ -1.55
PSEN1-206ENST00000553447 MT1AP04731 61 aa5.34□□□□□ -1.55
PSEN1-206ENST00000553447 KRTAP6-1Q3LI64 71 aa5.28□□□□□ -1.56
PSEN1-206ENST00000553447 KRTAP5-4Q6L8H1 288 aa5.27□□□□□ -1.57
PSEN1-206ENST00000553447 KRTAP4-9Q9BYQ8 210 aa5.25□□□□□ -1.57
PSEN1-206ENST00000553447 SYNE1Q8NF91 8797 aaKnown RBP5.12□□□□□ -1.59
PSEN1-206ENST00000553447 KRTAP4-11Q9BYQ6 195 aa5.11□□□□□ -1.59
PSEN1-206ENST00000553447 KRTAP12-4P60329 112 aa5.09□□□□□ -1.59
PSEN1-206ENST00000553447 MT4P47944 62 aa5.07□□□□□ -1.6
PSEN1-206ENST00000553447 KRTAP4-2Q9BYR5 136 aa5.04□□□□□ -1.6
PSEN1-206ENST00000553447 KRTAP20-2Q3LI61 65 aa4.93□□□□□ -1.62
PSEN1-206ENST00000553447 A0A0A0MQY5 61 aa4.9□□□□□ -1.63
PSEN1-206ENST00000553447 KRTAP6-2Q3LI66 62 aa4.88□□□□□ -1.63
PSEN1-206ENST00000553447 MT3P25713 68 aa4.84□□□□□ -1.63
PSEN1-206ENST00000553447 HMCN1Q96RW7 5635 aa4.82□□□□□ -1.64
PSEN1-206ENST00000553447 KRTAP5-2Q701N4 177 aa4.77□□□□□ -1.65
PSEN1-206ENST00000553447 KRTAP5-3Q6L8H2 238 aa4.76□□□□□ -1.65
PSEN1-206ENST00000553447 INE1O15225 51 aa4.58□□□□□ -1.68
PSEN1-206ENST00000553447 LCE3DQ9BYE3 92 aa4.58□□□□□ -1.68
PSEN1-206ENST00000553447 LCE3EQ5T5B0 92 aa4.45□□□□□ -1.7
PSEN1-206ENST00000553447 OBSCNQ5VST9 7968 aa4.44□□□□□ -1.7
PSEN1-206ENST00000553447 AHNAK2Q8IVF2 5795 aa4.37□□□□□ -1.71
PSEN1-206ENST00000553447 LCE1EQ5T753 118 aa4.23□□□□□ -1.73
PSEN1-206ENST00000553447 KRTAP5-10Q6L8G5 202 aa4.21□□□□□ -1.74
PSEN1-206ENST00000553447 KRTAP5-8O75690 187 aa4.14□□□□□ -1.75
PSEN1-206ENST00000553447 KRTAP5-1Q6L8H4 278 aa4.13□□□□□ -1.75
PSEN1-206ENST00000553447 GPR98Q8WXG9 6306 aa4.07□□□□□ -1.76
PSEN1-206ENST00000553447 KRTAP5-7Q6L8G8 165 aa4□□□□□ -1.77
PSEN1-206ENST00000553447 LCE1BQ5T7P3 118 aa3.96□□□□□ -1.78
PSEN1-206ENST00000553447 LCE1CQ5T751 118 aa3.93□□□□□ -1.78
PSEN1-206ENST00000553447 MUC5ACP98088 5654 aa3.9□□□□□ -1.78
PSEN1-206ENST00000553447 PRM1P04553 51 aa3.83□□□□□ -1.8
PSEN1-206ENST00000553447 LCE1FQ5T754 118 aa3.71□□□□□ -1.82
PSEN1-206ENST00000553447 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.68□□□□□ -1.82
PSEN1-206ENST00000553447 MUC5BQ9HC84 5762 aaPredicted RBP3.54□□□□□ -1.84
PSEN1-206ENST00000553447 KRTAP5-11Q6L8G4 156 aa3.48□□□□□ -1.85
PSEN1-206ENST00000553447 KRTAP21-2Q3LI59 83 aa3.47□□□□□ -1.85
PSEN1-206ENST00000553447 AHNAKQ09666 5890 aaKnown RBP3.32□□□□□ -1.88
PSEN1-206ENST00000553447 KRTAP4-4Q9BYR3 166 aa3.08□□□□□ -1.92
PSEN1-206ENST00000553447 PHGR1C9JFL3 82 aa2.99□□□□□ -1.93
PSEN1-206ENST00000553447 MUC19Q7Z5P9 8384 aa2.6□□□□□ -1.99
PSEN1-206ENST00000553447 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
PSEN1-206ENST00000553447 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 56 ms