RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 KRTAP19-5Q3LI72 72 aa5.5□□□□□ -1.53
MTHFD1-204ENST00000553405 LCE3BQ5TA77 95 aa5.45□□□□□ -1.54
MTHFD1-204ENST00000553405 ROMO1P60602 79 aa5.42□□□□□ -1.54
MTHFD1-204ENST00000553405 LCE5AQ5TCM9 118 aa5.37□□□□□ -1.55
MTHFD1-204ENST00000553405 BRK1Q8WUW1 75 aa5.37□□□□□ -1.55
MTHFD1-204ENST00000553405 KRTAP23-1A1A580 65 aa5.36□□□□□ -1.55
MTHFD1-204ENST00000553405 KRTAP19-3Q7Z4W3 81 aa5.36□□□□□ -1.55
MTHFD1-204ENST00000553405 KRTAP9-9Q9BYP9 154 aa5.35□□□□□ -1.55
MTHFD1-204ENST00000553405 KRTAP9-4Q9BYQ2 154 aa5.35□□□□□ -1.55
MTHFD1-204ENST00000553405 KRTAP12-3P60328 96 aa5.33□□□□□ -1.56
MTHFD1-204ENST00000553405 MT1LQ93083 61 aa5.32□□□□□ -1.56
MTHFD1-204ENST00000553405 SPRR2DP22532 72 aa5.3□□□□□ -1.56
MTHFD1-204ENST00000553405 MT1GP13640 62 aa5.27□□□□□ -1.57
MTHFD1-204ENST00000553405 KRTAP20-1Q3LI63 56 aa5.27□□□□□ -1.57
MTHFD1-204ENST00000553405 KRTAP2-3P0C7H8 128 aa5.24□□□□□ -1.57
MTHFD1-204ENST00000553405 KRTAP2-4Q9BYR9 128 aa5.24□□□□□ -1.57
MTHFD1-204ENST00000553405 MT1MQ8N339 61 aa5.21□□□□□ -1.58
MTHFD1-204ENST00000553405 DSTQ03001 7570 aaKnown RBP5.2□□□□□ -1.58
MTHFD1-204ENST00000553405 KRTAP19-4Q3LI73 84 aa5.19□□□□□ -1.58
MTHFD1-204ENST00000553405 PP632Q6XCG6 107 aa5.18□□□□□ -1.58
MTHFD1-204ENST00000553405 LCE1DQ5T752 114 aa5.12□□□□□ -1.59
MTHFD1-204ENST00000553405 KRTAP2-2Q9BYT5 123 aa5.1□□□□□ -1.59
MTHFD1-204ENST00000553405 KRTAP2-1Q9BYU5 128 aa5.1□□□□□ -1.59
MTHFD1-204ENST00000553405 KRTAP15-1Q3LI76 137 aa5.09□□□□□ -1.59
MTHFD1-204ENST00000553405 LCE4AQ5TA78 99 aa5.09□□□□□ -1.59
MTHFD1-204ENST00000553405 KRTAP4-7Q9BYR0 210 aa5.09□□□□□ -1.59
MTHFD1-204ENST00000553405 KRTAP4-3Q9BYR4 195 aa5.09□□□□□ -1.59
MTHFD1-204ENST00000553405 PMAIP1Q13794 54 aa5.06□□□□□ -1.6
MTHFD1-204ENST00000553405 PRO0628Q9UI54 55 aa5.04□□□□□ -1.6
MTHFD1-204ENST00000553405 KRTAP4-9Q9BYQ8 210 aa4.96□□□□□ -1.62
MTHFD1-204ENST00000553405 LCE3CQ5T5A8 94 aa4.95□□□□□ -1.62
MTHFD1-204ENST00000553405 PRAC1Q96KF2 57 aa4.86□□□□□ -1.63
MTHFD1-204ENST00000553405 KRTAP4-2Q9BYR5 136 aa4.82□□□□□ -1.64
MTHFD1-204ENST00000553405 KRTAP5-4Q6L8H1 288 aa4.8□□□□□ -1.64
MTHFD1-204ENST00000553405 KRTAP5-5Q701N2 237 aaPredicted RBP4.8□□□□□ -1.64
MTHFD1-204ENST00000553405 KRTAP4-11Q9BYQ6 195 aa4.8□□□□□ -1.64
MTHFD1-204ENST00000553405 KRTAP9-6A8MVA2 160 aa4.75□□□□□ -1.65
MTHFD1-204ENST00000553405 HMCN1Q96RW7 5635 aa4.73□□□□□ -1.65
MTHFD1-204ENST00000553405 KTN1-AS1Q86SY8 53 aa4.73□□□□□ -1.65
MTHFD1-204ENST00000553405 SYNE1Q8NF91 8797 aaKnown RBP4.66□□□□□ -1.66
MTHFD1-204ENST00000553405 MT4P47944 62 aa4.61□□□□□ -1.67
MTHFD1-204ENST00000553405 MT1AP04731 61 aa4.52□□□□□ -1.69
MTHFD1-204ENST00000553405 SPRR5A0A1B0GTR4 108 aa4.51□□□□□ -1.69
MTHFD1-204ENST00000553405 KRTAP6-1Q3LI64 71 aa4.49□□□□□ -1.69
MTHFD1-204ENST00000553405 KRTAP20-2Q3LI61 65 aa4.47□□□□□ -1.69
MTHFD1-204ENST00000553405 KRTAP12-4P60329 112 aa4.45□□□□□ -1.7
MTHFD1-204ENST00000553405 AHNAK2Q8IVF2 5795 aa4.45□□□□□ -1.7
MTHFD1-204ENST00000553405 GPR98Q8WXG9 6306 aa4.43□□□□□ -1.7
MTHFD1-204ENST00000553405 KRTAP5-3Q6L8H2 238 aa4.37□□□□□ -1.71
MTHFD1-204ENST00000553405 KRTAP5-2Q701N4 177 aa4.29□□□□□ -1.72
MTHFD1-204ENST00000553405 KRTAP6-2Q3LI66 62 aa4.2□□□□□ -1.74
MTHFD1-204ENST00000553405 KRTAP5-10Q6L8G5 202 aa4.18□□□□□ -1.74
MTHFD1-204ENST00000553405 MT3P25713 68 aa4.08□□□□□ -1.76
MTHFD1-204ENST00000553405 OBSCNQ5VST9 7968 aa3.96□□□□□ -1.78
MTHFD1-204ENST00000553405 KRTAP5-7Q6L8G8 165 aa3.95□□□□□ -1.78
MTHFD1-204ENST00000553405 LUZP6Q538Z0 58 aa3.9□□□□□ -1.79
MTHFD1-204ENST00000553405 NDUFAF8A1L188 74 aa3.88□□□□□ -1.79
MTHFD1-204ENST00000553405 KRTAP5-8O75690 187 aa3.87□□□□□ -1.79
MTHFD1-204ENST00000553405 MUC5ACP98088 5654 aa3.8□□□□□ -1.8
MTHFD1-204ENST00000553405 KRTAP5-1Q6L8H4 278 aa3.77□□□□□ -1.81
MTHFD1-204ENST00000553405 LCE1EQ5T753 118 aa3.7□□□□□ -1.82
MTHFD1-204ENST00000553405 MUC5BQ9HC84 5762 aaPredicted RBP3.63□□□□□ -1.83
MTHFD1-204ENST00000553405 LCE3DQ9BYE3 92 aa3.61□□□□□ -1.83
MTHFD1-204ENST00000553405 AHNAKQ09666 5890 aaKnown RBP3.59□□□□□ -1.84
MTHFD1-204ENST00000553405 LCE3EQ5T5B0 92 aa3.45□□□□□ -1.86
MTHFD1-204ENST00000553405 LCE1CQ5T751 118 aa3.44□□□□□ -1.86
MTHFD1-204ENST00000553405 LCE1BQ5T7P3 118 aa3.44□□□□□ -1.86
MTHFD1-204ENST00000553405 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
MTHFD1-204ENST00000553405 KRTAP5-11Q6L8G4 156 aa3.24□□□□□ -1.89
MTHFD1-204ENST00000553405 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.22□□□□□ -1.89
MTHFD1-204ENST00000553405 KRTAP21-2Q3LI59 83 aa2.99□□□□□ -1.93
MTHFD1-204ENST00000553405 INE1O15225 51 aa2.89□□□□□ -1.95
MTHFD1-204ENST00000553405 PRM1P04553 51 aa2.8□□□□□ -1.96
MTHFD1-204ENST00000553405 PHGR1C9JFL3 82 aa2.66□□□□□ -1.98
MTHFD1-204ENST00000553405 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
MTHFD1-204ENST00000553405 MUC19Q7Z5P9 8384 aa2.46□□□□□ -2.02
MTHFD1-204ENST00000553405 KRTAP21-1Q3LI58 79 aa1.78□□□□□ -2.12
MTHFD1-204ENST00000553405 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 82.3 ms