RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 SERP2Q8N6R1 65 aa4.09□□□□□ -1.75
NEK3-204ENST00000552973 A0A1B0GU33 70 aa4.08□□□□□ -1.76
NEK3-204ENST00000552973 PCP4P48539 62 aa4.07□□□□□ -1.76
NEK3-204ENST00000552973 MT1LQ93083 61 aa4.06□□□□□ -1.76
NEK3-204ENST00000552973 KRTAP4-3Q9BYR4 195 aa4.06□□□□□ -1.76
NEK3-204ENST00000552973 LCE3AQ5TA76 89 aa4□□□□□ -1.77
NEK3-204ENST00000552973 C10orf95Q9H7T3 257 aa4□□□□□ -1.77
NEK3-204ENST00000552973 HMCN1Q96RW7 5635 aa3.99□□□□□ -1.77
NEK3-204ENST00000552973 A0A0A0MQY5 61 aa3.98□□□□□ -1.77
NEK3-204ENST00000552973 A8MU10 97 aa3.98□□□□□ -1.77
NEK3-204ENST00000552973 KRTAP5-4Q6L8H1 288 aa3.97□□□□□ -1.77
NEK3-204ENST00000552973 SMIM26A0A096LP01 95 aa3.95□□□□□ -1.78
NEK3-204ENST00000552973 A0A1B0GU69 56 aa3.94□□□□□ -1.78
NEK3-204ENST00000552973 TNP1P09430 55 aa3.94□□□□□ -1.78
NEK3-204ENST00000552973 KRTAP5-10Q6L8G5 202 aa3.93□□□□□ -1.78
NEK3-204ENST00000552973 COX7CP15954 63 aa3.92□□□□□ -1.78
NEK3-204ENST00000552973 H7BZZ5 65 aa3.91□□□□□ -1.78
NEK3-204ENST00000552973 AHNAK2Q8IVF2 5795 aa3.88□□□□□ -1.79
NEK3-204ENST00000552973 KRTAP12-3P60328 96 aa3.82□□□□□ -1.8
NEK3-204ENST00000552973 KRTAP20-2Q3LI61 65 aa3.79□□□□□ -1.8
NEK3-204ENST00000552973 KRTAP5-7Q6L8G8 165 aa3.79□□□□□ -1.8
NEK3-204ENST00000552973 KRTAP5-5Q701N2 237 aaPredicted RBP3.75□□□□□ -1.81
NEK3-204ENST00000552973 PRR15LQ9BU68 103 aa3.73□□□□□ -1.81
NEK3-204ENST00000552973 SPRR5A0A1B0GTR4 108 aa3.71□□□□□ -1.82
NEK3-204ENST00000552973 KRTAP12-4P60329 112 aa3.7□□□□□ -1.82
NEK3-204ENST00000552973 ANAPC13Q9BS18 74 aa3.69□□□□□ -1.82
NEK3-204ENST00000552973 LINC01558Q9Y6Z2 57 aa3.67□□□□□ -1.82
NEK3-204ENST00000552973 CCDC179H3BU77 68 aa3.65□□□□□ -1.83
NEK3-204ENST00000552973 UQCR11O14957 56 aa3.61□□□□□ -1.83
NEK3-204ENST00000552973 SYNE1Q8NF91 8797 aaKnown RBP3.61□□□□□ -1.83
NEK3-204ENST00000552973 KRTAP25-1Q3LHN0 102 aa3.6□□□□□ -1.83
NEK3-204ENST00000552973 ATP5EP56381 51 aaPredicted RBP3.58□□□□□ -1.84
NEK3-204ENST00000552973 MIR22HGQ0VDD5 57 aa3.53□□□□□ -1.84
NEK3-204ENST00000552973 LCE3CQ5T5A8 94 aa3.5□□□□□ -1.85
NEK3-204ENST00000552973 K7ERS5 55 aa3.48□□□□□ -1.85
NEK3-204ENST00000552973 KRTAP6-1Q3LI64 71 aa3.47□□□□□ -1.85
NEK3-204ENST00000552973 MT1AP04731 61 aa3.44□□□□□ -1.86
NEK3-204ENST00000552973 TMEM258P61165 79 aa3.44□□□□□ -1.86
NEK3-204ENST00000552973 KRTAP5-2Q701N4 177 aa3.44□□□□□ -1.86
NEK3-204ENST00000552973 PSPHP1O15172 72 aa3.39□□□□□ -1.87
NEK3-204ENST00000552973 MT3P25713 68 aa3.39□□□□□ -1.87
NEK3-204ENST00000552973 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.39□□□□□ -1.87
NEK3-204ENST00000552973 KRTAP5-8O75690 187 aa3.38□□□□□ -1.87
NEK3-204ENST00000552973 KRTAP6-2Q3LI66 62 aa3.34□□□□□ -1.87
NEK3-204ENST00000552973 KRTAP9-6A8MVA2 160 aa3.33□□□□□ -1.88
NEK3-204ENST00000552973 Q1T7F1 81 aa3.29□□□□□ -1.88
NEK3-204ENST00000552973 V9GYY9 64 aa3.29□□□□□ -1.88
NEK3-204ENST00000552973 RPS28P62857 69 aaKnown RBP3.28□□□□□ -1.88
NEK3-204ENST00000552973 PRAC1Q96KF2 57 aa3.28□□□□□ -1.88
NEK3-204ENST00000552973 CDC42SE1Q9NRR8 79 aa3.28□□□□□ -1.88
NEK3-204ENST00000552973 A6NED7 52 aa3.24□□□□□ -1.89
NEK3-204ENST00000552973 OBSCNQ5VST9 7968 aa3.22□□□□□ -1.89
NEK3-204ENST00000552973 ROMO1P60602 79 aa3.22□□□□□ -1.89
NEK3-204ENST00000552973 MUC5ACP98088 5654 aa3.22□□□□□ -1.89
NEK3-204ENST00000552973 MUC5BQ9HC84 5762 aaPredicted RBP3.21□□□□□ -1.89
NEK3-204ENST00000552973 AHNAKQ09666 5890 aaKnown RBP3.19□□□□□ -1.9
NEK3-204ENST00000552973 LCE1FQ5T754 118 aa3.16□□□□□ -1.9
NEK3-204ENST00000552973 NDUFAF8A1L188 74 aa3.14□□□□□ -1.91
NEK3-204ENST00000552973 KRTAP5-11Q6L8G4 156 aa3.14□□□□□ -1.91
NEK3-204ENST00000552973 KRTAP5-1Q6L8H4 278 aa3.14□□□□□ -1.91
NEK3-204ENST00000552973 LCE1EQ5T753 118 aa3.06□□□□□ -1.92
NEK3-204ENST00000552973 PRO0628Q9UI54 55 aa2.92□□□□□ -1.94
NEK3-204ENST00000552973 BRK1Q8WUW1 75 aa2.89□□□□□ -1.95
NEK3-204ENST00000552973 LCE1BQ5T7P3 118 aa2.84□□□□□ -1.95
NEK3-204ENST00000552973 KRTAP4-4Q9BYR3 166 aa2.79□□□□□ -1.96
NEK3-204ENST00000552973 PMAIP1Q13794 54 aa2.77□□□□□ -1.97
NEK3-204ENST00000552973 LCE1CQ5T751 118 aa2.71□□□□□ -1.98
NEK3-204ENST00000552973 LCE3EQ5T5B0 92 aa2.7□□□□□ -1.98
NEK3-204ENST00000552973 KTN1-AS1Q86SY8 53 aa2.67□□□□□ -1.98
NEK3-204ENST00000552973 LCE3DQ9BYE3 92 aa2.49□□□□□ -2.01
NEK3-204ENST00000552973 PHGR1C9JFL3 82 aa2.32□□□□□ -2.04
NEK3-204ENST00000552973 KRTAP21-2Q3LI59 83 aa2.27□□□□□ -2.05
NEK3-204ENST00000552973 LUZP6Q538Z0 58 aa2.19□□□□□ -2.06
NEK3-204ENST00000552973 MUC19Q7Z5P9 8384 aa1.99□□□□□ -2.09
NEK3-204ENST00000552973 INE1O15225 51 aa1.77□□□□□ -2.13
NEK3-204ENST00000552973 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
NEK3-204ENST00000552973 PRM1P04553 51 aa1.66□□□□□ -2.14
NEK3-204ENST00000552973 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 133.7 ms