RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 SPRR2FQ96RM1 72 aa4.63□□□□□ -1.67
TRAFD1-209ENST00000552896 A8MU10 97 aa4.62□□□□□ -1.67
TRAFD1-209ENST00000552896 UQCR11O14957 56 aa4.57□□□□□ -1.68
TRAFD1-209ENST00000552896 PSPHP1O15172 72 aa4.52□□□□□ -1.69
TRAFD1-209ENST00000552896 SPRR2EP22531 72 aa4.52□□□□□ -1.69
TRAFD1-209ENST00000552896 SPRR2BP35325 72 aa4.52□□□□□ -1.69
TRAFD1-209ENST00000552896 SPRR2AP35326 72 aa4.52□□□□□ -1.69
TRAFD1-209ENST00000552896 Q1T7F1 81 aa4.52□□□□□ -1.69
TRAFD1-209ENST00000552896 LCE1AQ5T7P2 110 aa4.48□□□□□ -1.69
TRAFD1-209ENST00000552896 MIR22HGQ0VDD5 57 aa4.46□□□□□ -1.7
TRAFD1-209ENST00000552896 KRTAP20-1Q3LI63 56 aa4.43□□□□□ -1.7
TRAFD1-209ENST00000552896 C10orf95Q9H7T3 257 aa4.43□□□□□ -1.7
TRAFD1-209ENST00000552896 TNP1P09430 55 aa4.4□□□□□ -1.71
TRAFD1-209ENST00000552896 KRTAP19-7Q3SYF9 63 aa4.39□□□□□ -1.71
TRAFD1-209ENST00000552896 K7ERS5 55 aa4.37□□□□□ -1.71
TRAFD1-209ENST00000552896 SPRR2DP22532 72 aa4.37□□□□□ -1.71
TRAFD1-209ENST00000552896 KRTAP2-3P0C7H8 128 aa4.36□□□□□ -1.71
TRAFD1-209ENST00000552896 KRTAP2-4Q9BYR9 128 aa4.36□□□□□ -1.71
TRAFD1-209ENST00000552896 MT1EP04732 61 aa4.35□□□□□ -1.71
TRAFD1-209ENST00000552896 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.35□□□□□ -1.71
TRAFD1-209ENST00000552896 A6NED7 52 aa4.34□□□□□ -1.71
TRAFD1-209ENST00000552896 KRTAP19-5Q3LI72 72 aa4.32□□□□□ -1.72
TRAFD1-209ENST00000552896 LCE3AQ5TA76 89 aa4.32□□□□□ -1.72
TRAFD1-209ENST00000552896 KRTAP19-3Q7Z4W3 81 aa4.29□□□□□ -1.72
TRAFD1-209ENST00000552896 KRTAP5-11Q6L8G4 156 aa4.27□□□□□ -1.73
TRAFD1-209ENST00000552896 KRTAP25-1Q3LHN0 102 aa4.26□□□□□ -1.73
TRAFD1-209ENST00000552896 CDC42SE1Q9NRR8 79 aa4.26□□□□□ -1.73
TRAFD1-209ENST00000552896 NDUFAF8A1L188 74 aa4.22□□□□□ -1.73
TRAFD1-209ENST00000552896 KRTAP2-2Q9BYT5 123 aa4.22□□□□□ -1.73
TRAFD1-209ENST00000552896 KRTAP2-1Q9BYU5 128 aa4.22□□□□□ -1.73
TRAFD1-209ENST00000552896 MT1GP13640 62 aa4.19□□□□□ -1.74
TRAFD1-209ENST00000552896 MT1LQ93083 61 aa4.19□□□□□ -1.74
TRAFD1-209ENST00000552896 PP632Q6XCG6 107 aa4.18□□□□□ -1.74
TRAFD1-209ENST00000552896 KRTAP12-3P60328 96 aa4.16□□□□□ -1.74
TRAFD1-209ENST00000552896 MT1MQ8N339 61 aa4.13□□□□□ -1.75
TRAFD1-209ENST00000552896 DSTQ03001 7570 aaKnown RBP4.12□□□□□ -1.75
TRAFD1-209ENST00000552896 ROMO1P60602 79 aa4.11□□□□□ -1.75
TRAFD1-209ENST00000552896 LCE1EQ5T753 118 aa4.1□□□□□ -1.75
TRAFD1-209ENST00000552896 KRTAP4-3Q9BYR4 195 aa3.99□□□□□ -1.77
TRAFD1-209ENST00000552896 LUZP6Q538Z0 58 aa3.98□□□□□ -1.77
TRAFD1-209ENST00000552896 MT3P25713 68 aa3.88□□□□□ -1.79
TRAFD1-209ENST00000552896 KRTAP5-4Q6L8H1 288 aa3.85□□□□□ -1.79
TRAFD1-209ENST00000552896 LCE3CQ5T5A8 94 aa3.84□□□□□ -1.79
TRAFD1-209ENST00000552896 HMCN1Q96RW7 5635 aa3.82□□□□□ -1.8
TRAFD1-209ENST00000552896 KRTAP5-5Q701N2 237 aaPredicted RBP3.79□□□□□ -1.8
TRAFD1-209ENST00000552896 MT4P47944 62 aa3.78□□□□□ -1.8
TRAFD1-209ENST00000552896 KRTAP5-1Q6L8H4 278 aa3.75□□□□□ -1.81
TRAFD1-209ENST00000552896 GPR98Q8WXG9 6306 aa3.71□□□□□ -1.82
TRAFD1-209ENST00000552896 AHNAK2Q8IVF2 5795 aa3.64□□□□□ -1.83
TRAFD1-209ENST00000552896 SPRR5A0A1B0GTR4 108 aa3.63□□□□□ -1.83
TRAFD1-209ENST00000552896 KRTAP12-4P60329 112 aa3.63□□□□□ -1.83
TRAFD1-209ENST00000552896 KRTAP9-6A8MVA2 160 aa3.62□□□□□ -1.83
TRAFD1-209ENST00000552896 KRTAP20-2Q3LI61 65 aa3.61□□□□□ -1.83
TRAFD1-209ENST00000552896 KRTAP4-4Q9BYR3 166 aa3.61□□□□□ -1.83
TRAFD1-209ENST00000552896 MT1AP04731 61 aa3.58□□□□□ -1.84
TRAFD1-209ENST00000552896 KRTAP6-1Q3LI64 71 aa3.53□□□□□ -1.84
TRAFD1-209ENST00000552896 SYNE1Q8NF91 8797 aaKnown RBP3.53□□□□□ -1.84
TRAFD1-209ENST00000552896 KRTAP5-10Q6L8G5 202 aa3.47□□□□□ -1.85
TRAFD1-209ENST00000552896 KRTAP5-2Q701N4 177 aa3.42□□□□□ -1.86
TRAFD1-209ENST00000552896 LCE1FQ5T754 118 aa3.4□□□□□ -1.87
TRAFD1-209ENST00000552896 KRTAP5-7Q6L8G8 165 aa3.37□□□□□ -1.87
TRAFD1-209ENST00000552896 KRTAP6-2Q3LI66 62 aa3.33□□□□□ -1.88
TRAFD1-209ENST00000552896 INE1O15225 51 aa3.32□□□□□ -1.88
TRAFD1-209ENST00000552896 OBSCNQ5VST9 7968 aa3.22□□□□□ -1.89
TRAFD1-209ENST00000552896 KRTAP5-8O75690 187 aa3.14□□□□□ -1.91
TRAFD1-209ENST00000552896 MUC5ACP98088 5654 aa2.98□□□□□ -1.93
TRAFD1-209ENST00000552896 MUC5BQ9HC84 5762 aaPredicted RBP2.95□□□□□ -1.94
TRAFD1-209ENST00000552896 AHNAKQ09666 5890 aaKnown RBP2.94□□□□□ -1.94
TRAFD1-209ENST00000552896 LCE3EQ5T5B0 92 aa2.88□□□□□ -1.95
TRAFD1-209ENST00000552896 LCE3DQ9BYE3 92 aa2.8□□□□□ -1.96
TRAFD1-209ENST00000552896 LCE1CQ5T751 118 aa2.74□□□□□ -1.97
TRAFD1-209ENST00000552896 LCE1BQ5T7P3 118 aa2.74□□□□□ -1.97
TRAFD1-209ENST00000552896 KRTAP21-2Q3LI59 83 aa2.32□□□□□ -2.04
TRAFD1-209ENST00000552896 MUC19Q7Z5P9 8384 aa2.17□□□□□ -2.06
TRAFD1-209ENST00000552896 PHGR1C9JFL3 82 aa2.13□□□□□ -2.07
TRAFD1-209ENST00000552896 PRM1P04553 51 aa2.1□□□□□ -2.07
TRAFD1-209ENST00000552896 KRTAP21-1Q3LI58 79 aa1.55□□□□□ -2.16
TRAFD1-209ENST00000552896 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 188.5 ms