RNA–Protein interactions for RNA: ENST00000552862.1

CDK4-214, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-214ENST00000552862 PRR15LQ9BU68 103 aa4.41□□□□□ -1.7
CDK4-214ENST00000552862 MT1LQ93083 61 aa4.39□□□□□ -1.71
CDK4-214ENST00000552862 ATP5EP56381 51 aaPredicted RBP4.37□□□□□ -1.71
CDK4-214ENST00000552862 V9GYY9 64 aa4.37□□□□□ -1.71
CDK4-214ENST00000552862 KRTAP5-4Q6L8H1 288 aa4.35□□□□□ -1.71
CDK4-214ENST00000552862 HMCN1Q96RW7 5635 aa4.35□□□□□ -1.71
CDK4-214ENST00000552862 H7BZZ5 65 aa4.34□□□□□ -1.71
CDK4-214ENST00000552862 KRTAP19-4Q3LI73 84 aa4.32□□□□□ -1.72
CDK4-214ENST00000552862 LCE3AQ5TA76 89 aa4.29□□□□□ -1.72
CDK4-214ENST00000552862 KRTAP5-10Q6L8G5 202 aa4.26□□□□□ -1.73
CDK4-214ENST00000552862 KRTAP12-3P60328 96 aa4.24□□□□□ -1.73
CDK4-214ENST00000552862 A8MU10 97 aa4.22□□□□□ -1.73
CDK4-214ENST00000552862 KRTAP12-4P60329 112 aa4.22□□□□□ -1.73
CDK4-214ENST00000552862 KRTAP4-6Q9BYQ5 205 aa4.21□□□□□ -1.74
CDK4-214ENST00000552862 AHNAK2Q8IVF2 5795 aa4.2□□□□□ -1.74
CDK4-214ENST00000552862 SPRR5A0A1B0GTR4 108 aa4.2□□□□□ -1.74
CDK4-214ENST00000552862 PMAIP1Q13794 54 aa4.2□□□□□ -1.74
CDK4-214ENST00000552862 K7ERS5 55 aa4.19□□□□□ -1.74
CDK4-214ENST00000552862 KRTAP5-7Q6L8G8 165 aa4.19□□□□□ -1.74
CDK4-214ENST00000552862 BRK1Q8WUW1 75 aa4.19□□□□□ -1.74
CDK4-214ENST00000552862 UQCR11O14957 56 aa4.18□□□□□ -1.74
CDK4-214ENST00000552862 KRTAP25-1Q3LHN0 102 aa4.16□□□□□ -1.74
CDK4-214ENST00000552862 KRTAP4-3Q9BYR4 195 aa4.15□□□□□ -1.75
CDK4-214ENST00000552862 KRTAP5-3Q6L8H2 238 aa4.14□□□□□ -1.75
CDK4-214ENST00000552862 LINC01558Q9Y6Z2 57 aa4.13□□□□□ -1.75
CDK4-214ENST00000552862 Q1T7F1 81 aa4.11□□□□□ -1.75
CDK4-214ENST00000552862 KRTAP20-2Q3LI61 65 aa4.1□□□□□ -1.75
CDK4-214ENST00000552862 KRTAP23-1A1A580 65 aa4.06□□□□□ -1.76
CDK4-214ENST00000552862 KRTAP5-5Q701N2 237 aaPredicted RBP4.05□□□□□ -1.76
CDK4-214ENST00000552862 KTN1-AS1Q86SY8 53 aa4.02□□□□□ -1.77
CDK4-214ENST00000552862 KRTAP4-7Q9BYR0 210 aa4.01□□□□□ -1.77
CDK4-214ENST00000552862 MIR22HGQ0VDD5 57 aa4□□□□□ -1.77
CDK4-214ENST00000552862 KRTAP15-1Q3LI76 137 aa3.92□□□□□ -1.78
CDK4-214ENST00000552862 CDC42SE1Q9NRR8 79 aa3.9□□□□□ -1.79
CDK4-214ENST00000552862 PSPHP1O15172 72 aa3.89□□□□□ -1.79
CDK4-214ENST00000552862 A6NED7 52 aa3.88□□□□□ -1.79
CDK4-214ENST00000552862 LCE3CQ5T5A8 94 aa3.88□□□□□ -1.79
CDK4-214ENST00000552862 SYNE1Q8NF91 8797 aaKnown RBP3.86□□□□□ -1.79
CDK4-214ENST00000552862 KRTAP4-11Q9BYQ6 195 aa3.84□□□□□ -1.79
CDK4-214ENST00000552862 LOC100996750A0A140TA64 210 aa3.82□□□□□ -1.8
CDK4-214ENST00000552862 MT1AP04731 61 aa3.79□□□□□ -1.8
CDK4-214ENST00000552862 KRTAP5-2Q701N4 177 aa3.76□□□□□ -1.81
CDK4-214ENST00000552862 H3BS24 57 aa3.73□□□□□ -1.81
CDK4-214ENST00000552862 KRTAP9-4Q9BYQ2 154 aa3.7□□□□□ -1.82
CDK4-214ENST00000552862 ROMO1P60602 79 aa3.67□□□□□ -1.82
CDK4-214ENST00000552862 KRTAP6-1Q3LI64 71 aa3.67□□□□□ -1.82
CDK4-214ENST00000552862 KRTAP5-8O75690 187 aa3.65□□□□□ -1.83
CDK4-214ENST00000552862 KRTAP9-9Q9BYP9 154 aa3.65□□□□□ -1.83
CDK4-214ENST00000552862 KRTAP6-2Q3LI66 62 aa3.59□□□□□ -1.83
CDK4-214ENST00000552862 MT3P25713 68 aa3.57□□□□□ -1.84
CDK4-214ENST00000552862 AHNAKQ09666 5890 aaKnown RBP3.56□□□□□ -1.84
CDK4-214ENST00000552862 MUC5ACP98088 5654 aa3.54□□□□□ -1.84
CDK4-214ENST00000552862 PRAC1Q96KF2 57 aa3.53□□□□□ -1.84
CDK4-214ENST00000552862 MUC5BQ9HC84 5762 aaPredicted RBP3.5□□□□□ -1.85
CDK4-214ENST00000552862 OBSCNQ5VST9 7968 aa3.49□□□□□ -1.85
CDK4-214ENST00000552862 KRTAP9-6A8MVA2 160 aa3.44□□□□□ -1.86
CDK4-214ENST00000552862 KRTAP5-1Q6L8H4 278 aa3.38□□□□□ -1.87
CDK4-214ENST00000552862 LCE1EQ5T753 118 aa3.35□□□□□ -1.87
CDK4-214ENST00000552862 A0A0A0MQY5 61 aa3.3□□□□□ -1.88
CDK4-214ENST00000552862 NDUFAF8A1L188 74 aa3.19□□□□□ -1.9
CDK4-214ENST00000552862 LUZP6Q538Z0 58 aa3.17□□□□□ -1.9
CDK4-214ENST00000552862 LCE1CQ5T751 118 aa3.07□□□□□ -1.92
CDK4-214ENST00000552862 LCE1BQ5T7P3 118 aa3.07□□□□□ -1.92
CDK4-214ENST00000552862 KRTAP4-2Q9BYR5 136 aa2.98□□□□□ -1.93
CDK4-214ENST00000552862 LCE1FQ5T754 118 aa2.86□□□□□ -1.95
CDK4-214ENST00000552862 INE1O15225 51 aa2.84□□□□□ -1.95
CDK4-214ENST00000552862 LCE3DQ9BYE3 92 aa2.82□□□□□ -1.96
CDK4-214ENST00000552862 KRTAP5-11Q6L8G4 156 aa2.77□□□□□ -1.97
CDK4-214ENST00000552862 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.76□□□□□ -1.97
CDK4-214ENST00000552862 KRTAP4-12Q9BQ66 201 aa2.73□□□□□ -1.97
CDK4-214ENST00000552862 LCE3EQ5T5B0 92 aa2.62□□□□□ -1.99
CDK4-214ENST00000552862 PHGR1C9JFL3 82 aa2.53□□□□□ -2
CDK4-214ENST00000552862 KRTAP21-2Q3LI59 83 aa2.44□□□□□ -2.02
CDK4-214ENST00000552862 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
CDK4-214ENST00000552862 KRTAP4-4Q9BYR3 166 aa2.16□□□□□ -2.06
CDK4-214ENST00000552862 KRTAP21-1Q3LI58 79 aa2.02□□□□□ -2.09
CDK4-214ENST00000552862 PRM1P04553 51 aa1.76□□□□□ -2.13
CDK4-214ENST00000552862 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 7.6 ms