RNA–Protein interactions for RNA: ENST00000552744.5

SYT1-212, Transcript of synaptotagmin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYT1, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-212ENST00000552744 KRTAP12-3P60328 96 aa3.06□□□□□ -1.92
SYT1-212ENST00000552744 KRTAP10-5P60370 271 aa3.06□□□□□ -1.92
SYT1-212ENST00000552744 KRTAP10-12P60413 245 aa3.05□□□□□ -1.92
SYT1-212ENST00000552744 MT1XP80297 61 aa3.05□□□□□ -1.92
SYT1-212ENST00000552744 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
SYT1-212ENST00000552744 MT1BP07438 61 aa3.03□□□□□ -1.92
SYT1-212ENST00000552744 KRTAP10-7P60409 375 aaPredicted RBP3.02□□□□□ -1.93
SYT1-212ENST00000552744 KRTAP19-8Q3LI54 63 aa3.01□□□□□ -1.93
SYT1-212ENST00000552744 KMT2DO14686 5537 aa2.97□□□□□ -1.93
SYT1-212ENST00000552744 USH2AO75445 5202 aa2.97□□□□□ -1.93
SYT1-212ENST00000552744 KRTAP2-2Q9BYT5 123 aa2.93□□□□□ -1.94
SYT1-212ENST00000552744 MT3P25713 68 aa2.91□□□□□ -1.94
SYT1-212ENST00000552744 KRTAP19-5Q3LI72 72 aa2.91□□□□□ -1.94
SYT1-212ENST00000552744 LCE3CQ5T5A8 94 aa2.87□□□□□ -1.95
SYT1-212ENST00000552744 MUC5BQ9HC84 5762 aaPredicted RBP2.85□□□□□ -1.95
SYT1-212ENST00000552744 AHNAKQ09666 5890 aaKnown RBP2.85□□□□□ -1.95
SYT1-212ENST00000552744 KRTAP19-6Q3LI70 58 aa2.83□□□□□ -1.96
SYT1-212ENST00000552744 KRTAP9-6A8MVA2 160 aa2.81□□□□□ -1.96
SYT1-212ENST00000552744 KRTAP6-3Q3LI67 103 aa2.78□□□□□ -1.96
SYT1-212ENST00000552744 SSPOA2VEC9 5147 aa2.77□□□□□ -1.97
SYT1-212ENST00000552744 HMCN1Q96RW7 5635 aa2.74□□□□□ -1.97
SYT1-212ENST00000552744 FSIP2Q5CZC0 6907 aa2.71□□□□□ -1.98
SYT1-212ENST00000552744 KRTAP19-7Q3SYF9 63 aa2.71□□□□□ -1.98
SYT1-212ENST00000552744 KRTAP2-3P0C7H8 128 aa2.67□□□□□ -1.98
SYT1-212ENST00000552744 KRTAP2-4Q9BYR9 128 aa2.67□□□□□ -1.98
SYT1-212ENST00000552744 KRTAP2-1Q9BYU5 128 aa2.67□□□□□ -1.98
SYT1-212ENST00000552744 FCGBPQ9Y6R7 5405 aaPredicted RBP2.66□□□□□ -1.98
SYT1-212ENST00000552744 MT1LQ93083 61 aa2.64□□□□□ -1.99
SYT1-212ENST00000552744 LCE3EQ5T5B0 92 aa2.62□□□□□ -1.99
SYT1-212ENST00000552744 MT1EP04732 61 aa2.61□□□□□ -1.99
SYT1-212ENST00000552744 DSTQ03001 7570 aaKnown RBP2.61□□□□□ -1.99
SYT1-212ENST00000552744 KRTAP5-9P26371 169 aa2.61□□□□□ -1.99
SYT1-212ENST00000552744 KRTAP4-3Q9BYR4 195 aa2.59□□□□□ -1.99
SYT1-212ENST00000552744 KRTAP20-1Q3LI63 56 aa2.58□□□□□ -2
SYT1-212ENST00000552744 NEBP20929 6669 aa2.57□□□□□ -2
SYT1-212ENST00000552744 MUC12Q9UKN1 5478 aa2.57□□□□□ -2
SYT1-212ENST00000552744 MT1GP13640 62 aa2.56□□□□□ -2
SYT1-212ENST00000552744 MACF1Q9UPN3 7388 aaKnown RBP2.5□□□□□ -2.01
SYT1-212ENST00000552744 KRTAP12-4P60329 112 aa2.5□□□□□ -2.01
SYT1-212ENST00000552744 SYNE1Q8NF91 8797 aaKnown RBP2.49□□□□□ -2.01
SYT1-212ENST00000552744 MT1MQ8N339 61 aa2.44□□□□□ -2.02
SYT1-212ENST00000552744 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.42□□□□□ -2.02
SYT1-212ENST00000552744 KRTAP19-3Q7Z4W3 81 aa2.42□□□□□ -2.02
SYT1-212ENST00000552744 SYNE2Q8WXH0 6885 aaKnown RBP2.41□□□□□ -2.02
SYT1-212ENST00000552744 OBSCNQ5VST9 7968 aa2.4□□□□□ -2.03
SYT1-212ENST00000552744 SPRR2EP22531 72 aa2.38□□□□□ -2.03
SYT1-212ENST00000552744 SPRR2BP35325 72 aa2.38□□□□□ -2.03
SYT1-212ENST00000552744 SPRR2AP35326 72 aa2.38□□□□□ -2.03
SYT1-212ENST00000552744 SPRR2FQ96RM1 72 aa2.36□□□□□ -2.03
SYT1-212ENST00000552744 KRTAP5-11Q6L8G4 156 aa2.35□□□□□ -2.03
SYT1-212ENST00000552744 AHNAK2Q8IVF2 5795 aa2.34□□□□□ -2.03
SYT1-212ENST00000552744 SPRR2DP22532 72 aa2.33□□□□□ -2.04
SYT1-212ENST00000552744 LCE3DQ9BYE3 92 aa2.31□□□□□ -2.04
SYT1-212ENST00000552744 LCE1EQ5T753 118 aa2.28□□□□□ -2.04
SYT1-212ENST00000552744 KRTAP6-1Q3LI64 71 aa2.28□□□□□ -2.04
SYT1-212ENST00000552744 MDN1Q9NU22 5596 aa2.26□□□□□ -2.05
SYT1-212ENST00000552744 KRTAP5-7Q6L8G8 165 aa2.25□□□□□ -2.05
SYT1-212ENST00000552744 PRM1P04553 51 aa2.23□□□□□ -2.05
SYT1-212ENST00000552744 MT1AP04731 61 aa2.21□□□□□ -2.06
SYT1-212ENST00000552744 KRTAP5-5Q701N2 237 aaPredicted RBP2.18□□□□□ -2.06
SYT1-212ENST00000552744 KRTAP6-2Q3LI66 62 aa2.11□□□□□ -2.07
SYT1-212ENST00000552744 KRTAP5-1Q6L8H4 278 aa2.1□□□□□ -2.07
SYT1-212ENST00000552744 KRTAP5-4Q6L8H1 288 aa2.09□□□□□ -2.08
SYT1-212ENST00000552744 KRTAP5-10Q6L8G5 202 aa2.03□□□□□ -2.09
SYT1-212ENST00000552744 KRTAP4-4Q9BYR3 166 aa2.03□□□□□ -2.09
SYT1-212ENST00000552744 MUC5ACP98088 5654 aa1.98□□□□□ -2.09
SYT1-212ENST00000552744 MT4P47944 62 aa1.92□□□□□ -2.1
SYT1-212ENST00000552744 KRTAP20-2Q3LI61 65 aa1.9□□□□□ -2.1
SYT1-212ENST00000552744 KRTAP5-2Q701N4 177 aa1.9□□□□□ -2.1
SYT1-212ENST00000552744 KRTAP5-8O75690 187 aa1.86□□□□□ -2.11
SYT1-212ENST00000552744 LCE1BQ5T7P3 118 aa1.69□□□□□ -2.14
SYT1-212ENST00000552744 MUC19Q7Z5P9 8384 aa1.62□□□□□ -2.15
SYT1-212ENST00000552744 LCE1CQ5T751 118 aa1.51□□□□□ -2.17
SYT1-212ENST00000552744 KRTAP21-2Q3LI59 83 aa1.43□□□□□ -2.18
SYT1-212ENST00000552744 KRTAP21-1Q3LI58 79 aa1.33□□□□□ -2.2
SYT1-212ENST00000552744 PHGR1C9JFL3 82 aa1.13□□□□□ -2.23
SYT1-212ENST00000552744 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 234.2 ms