RNA–Protein interactions for RNA: ENST00000552681.1

GNPTAB-210, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 1 (best)

Gene GNPTAB, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-210ENST00000552681 M0QZ58 72 aa3.09□□□□□ -1.91
GNPTAB-210ENST00000552681 KRTAP19-2Q3LHN2 52 aa3.09□□□□□ -1.92
GNPTAB-210ENST00000552681 HMCN1Q96RW7 5635 aa3.07□□□□□ -1.92
GNPTAB-210ENST00000552681 MT1HP80294 61 aa3.07□□□□□ -1.92
GNPTAB-210ENST00000552681 KRTAP10-5P60370 271 aa3.07□□□□□ -1.92
GNPTAB-210ENST00000552681 FLGP20930 4061 aaPredicted RBP3.06□□□□□ -1.92
GNPTAB-210ENST00000552681 M0R2T5 61 aa3.05□□□□□ -1.92
GNPTAB-210ENST00000552681 KRTAP5-11Q6L8G4 156 aa3.02□□□□□ -1.93
GNPTAB-210ENST00000552681 FSIP2Q5CZC0 6907 aa3.01□□□□□ -1.93
GNPTAB-210ENST00000552681 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.99□□□□□ -1.93
GNPTAB-210ENST00000552681 KRTAP12-3P60328 96 aa2.98□□□□□ -1.93
GNPTAB-210ENST00000552681 SPRR2GQ9BYE4 73 aa2.84□□□□□ -1.95
GNPTAB-210ENST00000552681 MT2AP02795 61 aa2.84□□□□□ -1.96
GNPTAB-210ENST00000552681 MT1FP04733 61 aa2.82□□□□□ -1.96
GNPTAB-210ENST00000552681 KRTAP19-6Q3LI70 58 aa2.81□□□□□ -1.96
GNPTAB-210ENST00000552681 SSPOA2VEC9 5147 aa2.8□□□□□ -1.96
GNPTAB-210ENST00000552681 FCGBPQ9Y6R7 5405 aaPredicted RBP2.8□□□□□ -1.96
GNPTAB-210ENST00000552681 GPR98Q8WXG9 6306 aa2.78□□□□□ -1.96
GNPTAB-210ENST00000552681 USH2AO75445 5202 aa2.78□□□□□ -1.96
GNPTAB-210ENST00000552681 KRTAP19-8Q3LI54 63 aa2.75□□□□□ -1.97
GNPTAB-210ENST00000552681 TNP1P09430 55 aa2.73□□□□□ -1.97
GNPTAB-210ENST00000552681 KRTAP20-1Q3LI63 56 aa2.71□□□□□ -1.98
GNPTAB-210ENST00000552681 MACF1Q9UPN3 7388 aaKnown RBP2.68□□□□□ -1.98
GNPTAB-210ENST00000552681 KRTAP9-6A8MVA2 160 aa2.68□□□□□ -1.98
GNPTAB-210ENST00000552681 MT1BP07438 61 aa2.67□□□□□ -1.98
GNPTAB-210ENST00000552681 KRTAP5-1Q6L8H4 278 aa2.66□□□□□ -1.98
GNPTAB-210ENST00000552681 KRTAP5-9P26371 169 aa2.63□□□□□ -1.99
GNPTAB-210ENST00000552681 SYNE2Q8WXH0 6885 aaKnown RBP2.63□□□□□ -1.99
GNPTAB-210ENST00000552681 MT1XP80297 61 aa2.62□□□□□ -1.99
GNPTAB-210ENST00000552681 NEBP20929 6669 aa2.62□□□□□ -1.99
GNPTAB-210ENST00000552681 KRTAP2-3P0C7H8 128 aa2.59□□□□□ -1.99
GNPTAB-210ENST00000552681 KRTAP2-4Q9BYR9 128 aa2.59□□□□□ -1.99
GNPTAB-210ENST00000552681 LCE3AQ5TA76 89 aa2.56□□□□□ -2
GNPTAB-210ENST00000552681 KRTAP8-1Q8IUC2 63 aa2.55□□□□□ -2
GNPTAB-210ENST00000552681 KRTAP4-4Q9BYR3 166 aa2.54□□□□□ -2
GNPTAB-210ENST00000552681 KRTAP2-1Q9BYU5 128 aa2.52□□□□□ -2.01
GNPTAB-210ENST00000552681 KRTAP5-4Q6L8H1 288 aa2.51□□□□□ -2.01
GNPTAB-210ENST00000552681 MUC12Q9UKN1 5478 aa2.47□□□□□ -2.01
GNPTAB-210ENST00000552681 SPRR2EP22531 72 aa2.46□□□□□ -2.02
GNPTAB-210ENST00000552681 SPRR2BP35325 72 aa2.46□□□□□ -2.02
GNPTAB-210ENST00000552681 SPRR2AP35326 72 aa2.46□□□□□ -2.02
GNPTAB-210ENST00000552681 SPRR2FQ96RM1 72 aa2.43□□□□□ -2.02
GNPTAB-210ENST00000552681 OBSCNQ5VST9 7968 aa2.42□□□□□ -2.02
GNPTAB-210ENST00000552681 KMT2DO14686 5537 aa2.42□□□□□ -2.02
GNPTAB-210ENST00000552681 MDN1Q9NU22 5596 aa2.4□□□□□ -2.03
GNPTAB-210ENST00000552681 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.03
GNPTAB-210ENST00000552681 PRM1P04553 51 aa2.39□□□□□ -2.03
GNPTAB-210ENST00000552681 SPRR2DP22532 72 aa2.39□□□□□ -2.03
GNPTAB-210ENST00000552681 KRTAP19-5Q3LI72 72 aa2.39□□□□□ -2.03
GNPTAB-210ENST00000552681 LCE1CQ5T751 118 aa2.39□□□□□ -2.03
GNPTAB-210ENST00000552681 LCE1BQ5T7P3 118 aa2.39□□□□□ -2.03
GNPTAB-210ENST00000552681 KRTAP19-7Q3SYF9 63 aa2.33□□□□□ -2.04
GNPTAB-210ENST00000552681 MT1EP04732 61 aa2.29□□□□□ -2.04
GNPTAB-210ENST00000552681 MT1LQ93083 61 aa2.26□□□□□ -2.05
GNPTAB-210ENST00000552681 KRTAP4-3Q9BYR4 195 aa2.24□□□□□ -2.05
GNPTAB-210ENST00000552681 AHNAK2Q8IVF2 5795 aa2.24□□□□□ -2.05
GNPTAB-210ENST00000552681 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
GNPTAB-210ENST00000552681 MT1GP13640 62 aa2.19□□□□□ -2.06
GNPTAB-210ENST00000552681 KRTAP19-3Q7Z4W3 81 aa2.19□□□□□ -2.06
GNPTAB-210ENST00000552681 KRTAP5-5Q701N2 237 aaPredicted RBP2.18□□□□□ -2.06
GNPTAB-210ENST00000552681 DSTQ03001 7570 aaKnown RBP2.17□□□□□ -2.06
GNPTAB-210ENST00000552681 KRTAP5-2Q701N4 177 aa2.15□□□□□ -2.06
GNPTAB-210ENST00000552681 AHNAKQ09666 5890 aaKnown RBP2.15□□□□□ -2.07
GNPTAB-210ENST00000552681 MT1MQ8N339 61 aa2.15□□□□□ -2.07
GNPTAB-210ENST00000552681 KRTAP5-7Q6L8G8 165 aa2.14□□□□□ -2.07
GNPTAB-210ENST00000552681 SYNE1Q8NF91 8797 aaKnown RBP2.13□□□□□ -2.07
GNPTAB-210ENST00000552681 KRTAP5-10Q6L8G5 202 aa2.11□□□□□ -2.07
GNPTAB-210ENST00000552681 KRTAP5-8O75690 187 aa2.07□□□□□ -2.08
GNPTAB-210ENST00000552681 MT4P47944 62 aa2.05□□□□□ -2.08
GNPTAB-210ENST00000552681 MT1AP04731 61 aa1.93□□□□□ -2.1
GNPTAB-210ENST00000552681 KRTAP20-2Q3LI61 65 aa1.92□□□□□ -2.1
GNPTAB-210ENST00000552681 KRTAP6-1Q3LI64 71 aa1.89□□□□□ -2.11
GNPTAB-210ENST00000552681 MUC5ACP98088 5654 aa1.85□□□□□ -2.11
GNPTAB-210ENST00000552681 KRTAP6-2Q3LI66 62 aa1.82□□□□□ -2.12
GNPTAB-210ENST00000552681 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
GNPTAB-210ENST00000552681 KRTAP21-2Q3LI59 83 aa1.37□□□□□ -2.19
GNPTAB-210ENST00000552681 PHGR1C9JFL3 82 aa1.24□□□□□ -2.21
GNPTAB-210ENST00000552681 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 134.1 ms