RNA–Protein interactions for RNA: ENST00000552627.1

SMARCC2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 409 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-213ENST00000552627 KRTAP10-10P60014 251 aa2.64□□□□□ -1.99
SMARCC2-213ENST00000552627 CRCT1Q9UGL9 99 aa2.62□□□□□ -1.99
SMARCC2-213ENST00000552627 S4R3F8 94 aa2.61□□□□□ -1.99
SMARCC2-213ENST00000552627 USH2AO75445 5202 aa2.6□□□□□ -1.99
SMARCC2-213ENST00000552627 LUZP6Q538Z0 58 aa2.59□□□□□ -1.99
SMARCC2-213ENST00000552627 SSPOA2VEC9 5147 aa2.58□□□□□ -2
SMARCC2-213ENST00000552627 KRTAP5-5Q701N2 237 aaPredicted RBP2.57□□□□□ -2
SMARCC2-213ENST00000552627 M0QZ58 72 aa2.51□□□□□ -2.01
SMARCC2-213ENST00000552627 A0A0D9SG42 100 aa2.5□□□□□ -2.01
SMARCC2-213ENST00000552627 KRTAP13-4Q3LI77 160 aa2.5□□□□□ -2.01
SMARCC2-213ENST00000552627 C10orf95Q9H7T3 257 aa2.5□□□□□ -2.01
SMARCC2-213ENST00000552627 KRTAP12-1P59990 96 aa2.48□□□□□ -2.01
SMARCC2-213ENST00000552627 FCGBPQ9Y6R7 5405 aaPredicted RBP2.47□□□□□ -2.01
SMARCC2-213ENST00000552627 PP632Q6XCG6 107 aa2.47□□□□□ -2.01
SMARCC2-213ENST00000552627 PLAC4Q8WY50 150 aa2.47□□□□□ -2.01
SMARCC2-213ENST00000552627 MT1BP07438 61 aa2.46□□□□□ -2.02
SMARCC2-213ENST00000552627 KRTAP19-6Q3LI70 58 aa2.46□□□□□ -2.02
SMARCC2-213ENST00000552627 CAMK2N1Q7Z7J9 78 aa2.46□□□□□ -2.02
SMARCC2-213ENST00000552627 SPRR2GQ9BYE4 73 aa2.46□□□□□ -2.02
SMARCC2-213ENST00000552627 KRTAP19-8Q3LI54 63 aa2.44□□□□□ -2.02
SMARCC2-213ENST00000552627 LCE1CQ5T751 118 aa2.44□□□□□ -2.02
SMARCC2-213ENST00000552627 LCE1BQ5T7P3 118 aa2.44□□□□□ -2.02
SMARCC2-213ENST00000552627 SYNE2Q8WXH0 6885 aaKnown RBP2.44□□□□□ -2.02
SMARCC2-213ENST00000552627 LCE3DQ9BYE3 92 aa2.43□□□□□ -2.02
SMARCC2-213ENST00000552627 MACF1Q9UPN3 7388 aaKnown RBP2.43□□□□□ -2.02
SMARCC2-213ENST00000552627 KRTAP5-2Q701N4 177 aa2.41□□□□□ -2.02
SMARCC2-213ENST00000552627 R4GN34 69 aa2.38□□□□□ -2.03
SMARCC2-213ENST00000552627 PRO2289Q9P1D8 64 aa2.34□□□□□ -2.03
SMARCC2-213ENST00000552627 SPRR5A0A1B0GTR4 108 aa2.32□□□□□ -2.04
SMARCC2-213ENST00000552627 MT1XP80297 61 aa2.32□□□□□ -2.04
SMARCC2-213ENST00000552627 INE1O15225 51 aa2.31□□□□□ -2.04
SMARCC2-213ENST00000552627 KRTAP6-3Q3LI67 103 aa2.29□□□□□ -2.04
SMARCC2-213ENST00000552627 NEBP20929 6669 aa2.28□□□□□ -2.04
SMARCC2-213ENST00000552627 TNP1P09430 55 aa2.23□□□□□ -2.05
SMARCC2-213ENST00000552627 KMT2DO14686 5537 aa2.23□□□□□ -2.05
SMARCC2-213ENST00000552627 KRTAP8-1Q8IUC2 63 aa2.2□□□□□ -2.06
SMARCC2-213ENST00000552627 SPRR2FQ96RM1 72 aa2.19□□□□□ -2.06
SMARCC2-213ENST00000552627 MUC12Q9UKN1 5478 aa2.19□□□□□ -2.06
SMARCC2-213ENST00000552627 SPRR2EP22531 72 aa2.15□□□□□ -2.07
SMARCC2-213ENST00000552627 SPRR2BP35325 72 aa2.15□□□□□ -2.07
SMARCC2-213ENST00000552627 SPRR2AP35326 72 aa2.15□□□□□ -2.07
SMARCC2-213ENST00000552627 MDN1Q9NU22 5596 aa2.14□□□□□ -2.07
SMARCC2-213ENST00000552627 KRTAP20-1Q3LI63 56 aa2.1□□□□□ -2.07
SMARCC2-213ENST00000552627 KRTAP19-7Q3SYF9 63 aa2.08□□□□□ -2.08
SMARCC2-213ENST00000552627 SPRR2DP22532 72 aa2.07□□□□□ -2.08
SMARCC2-213ENST00000552627 KRTAP19-5Q3LI72 72 aa2.06□□□□□ -2.08
SMARCC2-213ENST00000552627 MT1EP04732 61 aa2.05□□□□□ -2.08
SMARCC2-213ENST00000552627 KRTAP2-3P0C7H8 128 aa2.05□□□□□ -2.08
SMARCC2-213ENST00000552627 KRTAP2-4Q9BYR9 128 aa2.05□□□□□ -2.08
SMARCC2-213ENST00000552627 KRTAP5-7Q6L8G8 165 aa2.01□□□□□ -2.09
SMARCC2-213ENST00000552627 KRTAP19-3Q7Z4W3 81 aa2□□□□□ -2.09
SMARCC2-213ENST00000552627 KRTAP5-8O75690 187 aa1.98□□□□□ -2.09
SMARCC2-213ENST00000552627 KRTAP2-1Q9BYU5 128 aa1.98□□□□□ -2.09
SMARCC2-213ENST00000552627 MT1LQ93083 61 aa1.97□□□□□ -2.09
SMARCC2-213ENST00000552627 MT1GP13640 62 aa1.95□□□□□ -2.1
SMARCC2-213ENST00000552627 KRTAP12-3P60328 96 aa1.95□□□□□ -2.1
SMARCC2-213ENST00000552627 MT1MQ8N339 61 aa1.95□□□□□ -2.1
SMARCC2-213ENST00000552627 DSTQ03001 7570 aaKnown RBP1.93□□□□□ -2.1
SMARCC2-213ENST00000552627 MUC19Q7Z5P9 8384 aa1.89□□□□□ -2.11
SMARCC2-213ENST00000552627 MT4P47944 62 aa1.83□□□□□ -2.12
SMARCC2-213ENST00000552627 HMCN1Q96RW7 5635 aa1.79□□□□□ -2.12
SMARCC2-213ENST00000552627 GPR98Q8WXG9 6306 aa1.77□□□□□ -2.13
SMARCC2-213ENST00000552627 KRTAP12-4P60329 112 aa1.75□□□□□ -2.13
SMARCC2-213ENST00000552627 KRTAP21-2Q3LI59 83 aa1.72□□□□□ -2.13
SMARCC2-213ENST00000552627 KRTAP20-2Q3LI61 65 aa1.7□□□□□ -2.14
SMARCC2-213ENST00000552627 AHNAK2Q8IVF2 5795 aa1.68□□□□□ -2.14
SMARCC2-213ENST00000552627 KRTAP6-1Q3LI64 71 aa1.68□□□□□ -2.14
SMARCC2-213ENST00000552627 MT1AP04731 61 aa1.67□□□□□ -2.14
SMARCC2-213ENST00000552627 SYNE1Q8NF91 8797 aaKnown RBP1.67□□□□□ -2.14
SMARCC2-213ENST00000552627 KRTAP5-10Q6L8G5 202 aa1.63□□□□□ -2.15
SMARCC2-213ENST00000552627 KRTAP6-2Q3LI66 62 aa1.59□□□□□ -2.15
SMARCC2-213ENST00000552627 PRM1P04553 51 aa1.43□□□□□ -2.18
SMARCC2-213ENST00000552627 MUC5ACP98088 5654 aa1.4□□□□□ -2.19
SMARCC2-213ENST00000552627 AHNAKQ09666 5890 aaKnown RBP1.38□□□□□ -2.19
SMARCC2-213ENST00000552627 MUC5BQ9HC84 5762 aaPredicted RBP1.37□□□□□ -2.19
SMARCC2-213ENST00000552627 PHGR1C9JFL3 82 aa0.99□□□□□ -2.25
SMARCC2-213ENST00000552627 KRTAP21-1Q3LI58 79 aa0.99□□□□□ -2.25
SMARCC2-213ENST00000552627 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 5.7 ms