RNA–Protein interactions for RNA: ENST00000552483.5

CNOT2-239, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 895 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-239ENST00000552483 C10orf95Q9H7T3 257 aa4.11□□□□□ -1.75
CNOT2-239ENST00000552483 UQCR11O14957 56 aa4.08□□□□□ -1.76
CNOT2-239ENST00000552483 PSPHP1O15172 72 aa4.06□□□□□ -1.76
CNOT2-239ENST00000552483 KRTAP2-3P0C7H8 128 aa4.06□□□□□ -1.76
CNOT2-239ENST00000552483 SPRR2DP22532 72 aa4.06□□□□□ -1.76
CNOT2-239ENST00000552483 KRTAP2-4Q9BYR9 128 aa4.06□□□□□ -1.76
CNOT2-239ENST00000552483 MT1EP04732 61 aa4.05□□□□□ -1.76
CNOT2-239ENST00000552483 Q1T7F1 81 aa4.05□□□□□ -1.76
CNOT2-239ENST00000552483 MIR22HGQ0VDD5 57 aa4.03□□□□□ -1.76
CNOT2-239ENST00000552483 KRTAP19-5Q3LI72 72 aa4.02□□□□□ -1.77
CNOT2-239ENST00000552483 V9GYY9 64 aa4.01□□□□□ -1.77
CNOT2-239ENST00000552483 A0A0A0MQY5 61 aa4□□□□□ -1.77
CNOT2-239ENST00000552483 LCE3AQ5TA76 89 aa4□□□□□ -1.77
CNOT2-239ENST00000552483 TNP1P09430 55 aa3.99□□□□□ -1.77
CNOT2-239ENST00000552483 KRTAP19-3Q7Z4W3 81 aa3.97□□□□□ -1.77
CNOT2-239ENST00000552483 KRTAP2-2Q9BYT5 123 aa3.94□□□□□ -1.78
CNOT2-239ENST00000552483 KRTAP2-1Q9BYU5 128 aa3.94□□□□□ -1.78
CNOT2-239ENST00000552483 RPS28P62857 69 aaKnown RBP3.93□□□□□ -1.78
CNOT2-239ENST00000552483 A6NED7 52 aa3.89□□□□□ -1.79
CNOT2-239ENST00000552483 MT1LQ93083 61 aa3.89□□□□□ -1.79
CNOT2-239ENST00000552483 MT1GP13640 62 aa3.86□□□□□ -1.79
CNOT2-239ENST00000552483 K7ERS5 55 aa3.85□□□□□ -1.79
CNOT2-239ENST00000552483 MT1MQ8N339 61 aa3.85□□□□□ -1.79
CNOT2-239ENST00000552483 KRTAP25-1Q3LHN0 102 aa3.83□□□□□ -1.8
CNOT2-239ENST00000552483 KRTAP12-3P60328 96 aa3.81□□□□□ -1.8
CNOT2-239ENST00000552483 KRTAP4-3Q9BYR4 195 aa3.8□□□□□ -1.8
CNOT2-239ENST00000552483 DSTQ03001 7570 aaKnown RBP3.79□□□□□ -1.8
CNOT2-239ENST00000552483 PP632Q6XCG6 107 aa3.78□□□□□ -1.8
CNOT2-239ENST00000552483 CDC42SE1Q9NRR8 79 aa3.75□□□□□ -1.81
CNOT2-239ENST00000552483 ROMO1P60602 79 aa3.69□□□□□ -1.82
CNOT2-239ENST00000552483 KRTAP5-4Q6L8H1 288 aa3.58□□□□□ -1.84
CNOT2-239ENST00000552483 MT4P47944 62 aa3.56□□□□□ -1.84
CNOT2-239ENST00000552483 LCE3CQ5T5A8 94 aa3.52□□□□□ -1.85
CNOT2-239ENST00000552483 KRTAP5-5Q701N2 237 aaPredicted RBP3.52□□□□□ -1.85
CNOT2-239ENST00000552483 BRK1Q8WUW1 75 aa3.48□□□□□ -1.85
CNOT2-239ENST00000552483 HMCN1Q96RW7 5635 aa3.45□□□□□ -1.86
CNOT2-239ENST00000552483 SYNE1Q8NF91 8797 aaKnown RBP3.42□□□□□ -1.86
CNOT2-239ENST00000552483 KRTAP9-6A8MVA2 160 aa3.4□□□□□ -1.87
CNOT2-239ENST00000552483 MT3P25713 68 aa3.4□□□□□ -1.87
CNOT2-239ENST00000552483 GPR98Q8WXG9 6306 aa3.38□□□□□ -1.87
CNOT2-239ENST00000552483 KRTAP20-2Q3LI61 65 aa3.37□□□□□ -1.87
CNOT2-239ENST00000552483 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.37□□□□□ -1.87
CNOT2-239ENST00000552483 AHNAK2Q8IVF2 5795 aa3.34□□□□□ -1.87
CNOT2-239ENST00000552483 SPRR5A0A1B0GTR4 108 aa3.33□□□□□ -1.88
CNOT2-239ENST00000552483 KRTAP5-11Q6L8G4 156 aa3.33□□□□□ -1.88
CNOT2-239ENST00000552483 MT1AP04731 61 aa3.31□□□□□ -1.88
CNOT2-239ENST00000552483 KRTAP12-4P60329 112 aa3.31□□□□□ -1.88
CNOT2-239ENST00000552483 KRTAP6-1Q3LI64 71 aa3.3□□□□□ -1.88
CNOT2-239ENST00000552483 PRAC1Q96KF2 57 aa3.28□□□□□ -1.88
CNOT2-239ENST00000552483 PMAIP1Q13794 54 aa3.26□□□□□ -1.89
CNOT2-239ENST00000552483 KRTAP5-10Q6L8G5 202 aa3.26□□□□□ -1.89
CNOT2-239ENST00000552483 LCE1EQ5T753 118 aa3.19□□□□□ -1.9
CNOT2-239ENST00000552483 KRTAP5-2Q701N4 177 aa3.17□□□□□ -1.9
CNOT2-239ENST00000552483 NDUFAF8A1L188 74 aa3.14□□□□□ -1.91
CNOT2-239ENST00000552483 PRO0628Q9UI54 55 aa3.12□□□□□ -1.91
CNOT2-239ENST00000552483 KRTAP6-2Q3LI66 62 aa3.11□□□□□ -1.91
CNOT2-239ENST00000552483 LCE1FQ5T754 118 aa3.1□□□□□ -1.91
CNOT2-239ENST00000552483 KRTAP5-7Q6L8G8 165 aa3.1□□□□□ -1.91
CNOT2-239ENST00000552483 KTN1-AS1Q86SY8 53 aa2.97□□□□□ -1.93
CNOT2-239ENST00000552483 KRTAP5-8O75690 187 aa2.95□□□□□ -1.94
CNOT2-239ENST00000552483 KRTAP5-1Q6L8H4 278 aa2.93□□□□□ -1.94
CNOT2-239ENST00000552483 OBSCNQ5VST9 7968 aa2.86□□□□□ -1.95
CNOT2-239ENST00000552483 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
CNOT2-239ENST00000552483 MUC5ACP98088 5654 aa2.73□□□□□ -1.97
CNOT2-239ENST00000552483 AHNAKQ09666 5890 aaKnown RBP2.69□□□□□ -1.98
CNOT2-239ENST00000552483 MUC5BQ9HC84 5762 aaPredicted RBP2.68□□□□□ -1.98
CNOT2-239ENST00000552483 LCE3EQ5T5B0 92 aa2.62□□□□□ -1.99
CNOT2-239ENST00000552483 LCE1BQ5T7P3 118 aa2.56□□□□□ -2
CNOT2-239ENST00000552483 LUZP6Q538Z0 58 aa2.54□□□□□ -2
CNOT2-239ENST00000552483 LCE3DQ9BYE3 92 aa2.54□□□□□ -2
CNOT2-239ENST00000552483 LCE1CQ5T751 118 aa2.51□□□□□ -2.01
CNOT2-239ENST00000552483 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
CNOT2-239ENST00000552483 PHGR1C9JFL3 82 aa1.96□□□□□ -2.1
CNOT2-239ENST00000552483 PRM1P04553 51 aa1.92□□□□□ -2.1
CNOT2-239ENST00000552483 MUC19Q7Z5P9 8384 aa1.78□□□□□ -2.12
CNOT2-239ENST00000552483 INE1O15225 51 aa1.74□□□□□ -2.13
CNOT2-239ENST00000552483 KRTAP21-1Q3LI58 79 aa1.39□□□□□ -2.19
CNOT2-239ENST00000552483 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 68.1 ms