RNA–Protein interactions for RNA: ENST00000552375.1

DDX54-210, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-210ENST00000552375 PCP4P48539 62 aa5.13□□□□□ -1.59
DDX54-210ENST00000552375 Q1T7F1 81 aa5.13□□□□□ -1.59
DDX54-210ENST00000552375 GPR98Q8WXG9 6306 aa5.06□□□□□ -1.6
DDX54-210ENST00000552375 MT1GP13640 62 aa5.04□□□□□ -1.6
DDX54-210ENST00000552375 K7ERS5 55 aa5.02□□□□□ -1.61
DDX54-210ENST00000552375 PP632Q6XCG6 107 aa5.02□□□□□ -1.61
DDX54-210ENST00000552375 A6NED7 52 aa5.01□□□□□ -1.61
DDX54-210ENST00000552375 KRTAP4-12Q9BQ66 201 aa4.99□□□□□ -1.61
DDX54-210ENST00000552375 MT1MQ8N339 61 aa4.98□□□□□ -1.61
DDX54-210ENST00000552375 MT1LQ93083 61 aa4.98□□□□□ -1.61
DDX54-210ENST00000552375 KRTAP4-9Q9BYQ8 210 aa4.98□□□□□ -1.61
DDX54-210ENST00000552375 HMCN1Q96RW7 5635 aa4.94□□□□□ -1.62
DDX54-210ENST00000552375 RPS28P62857 69 aaKnown RBP4.92□□□□□ -1.62
DDX54-210ENST00000552375 KRTAP25-1Q3LHN0 102 aa4.91□□□□□ -1.62
DDX54-210ENST00000552375 KRTAP12-3P60328 96 aa4.89□□□□□ -1.63
DDX54-210ENST00000552375 LCE1DQ5T752 114 aa4.89□□□□□ -1.63
DDX54-210ENST00000552375 KRTAP9-9Q9BYP9 154 aa4.89□□□□□ -1.63
DDX54-210ENST00000552375 KRTAP9-4Q9BYQ2 154 aa4.89□□□□□ -1.63
DDX54-210ENST00000552375 LCE4AQ5TA78 99 aa4.87□□□□□ -1.63
DDX54-210ENST00000552375 KRTAP4-3Q9BYR4 195 aa4.87□□□□□ -1.63
DDX54-210ENST00000552375 MT4P47944 62 aa4.81□□□□□ -1.64
DDX54-210ENST00000552375 KRTAP4-7Q9BYR0 210 aa4.8□□□□□ -1.64
DDX54-210ENST00000552375 CDC42SE1Q9NRR8 79 aa4.8□□□□□ -1.64
DDX54-210ENST00000552375 KRTAP5-4Q6L8H1 288 aa4.78□□□□□ -1.64
DDX54-210ENST00000552375 AHNAK2Q8IVF2 5795 aa4.77□□□□□ -1.65
DDX54-210ENST00000552375 ROMO1P60602 79 aa4.73□□□□□ -1.65
DDX54-210ENST00000552375 KRTAP23-1A1A580 65 aa4.66□□□□□ -1.66
DDX54-210ENST00000552375 KRTAP15-1Q3LI76 137 aa4.61□□□□□ -1.67
DDX54-210ENST00000552375 KRTAP5-10Q6L8G5 202 aa4.58□□□□□ -1.68
DDX54-210ENST00000552375 KRTAP5-5Q701N2 237 aaPredicted RBP4.58□□□□□ -1.68
DDX54-210ENST00000552375 KRTAP20-2Q3LI61 65 aa4.52□□□□□ -1.69
DDX54-210ENST00000552375 LCE3CQ5T5A8 94 aa4.51□□□□□ -1.69
DDX54-210ENST00000552375 KRTAP19-4Q3LI73 84 aa4.5□□□□□ -1.69
DDX54-210ENST00000552375 SPRR5A0A1B0GTR4 108 aa4.49□□□□□ -1.69
DDX54-210ENST00000552375 BRK1Q8WUW1 75 aa4.48□□□□□ -1.69
DDX54-210ENST00000552375 KRTAP4-2Q9BYR5 136 aa4.48□□□□□ -1.69
DDX54-210ENST00000552375 SVIPQ8NHG7 77 aa4.47□□□□□ -1.69
DDX54-210ENST00000552375 KRTAP12-4P60329 112 aa4.46□□□□□ -1.7
DDX54-210ENST00000552375 KRTAP5-3Q6L8H2 238 aa4.46□□□□□ -1.7
DDX54-210ENST00000552375 SYNE1Q8NF91 8797 aaKnown RBP4.43□□□□□ -1.7
DDX54-210ENST00000552375 KRTAP5-7Q6L8G8 165 aa4.41□□□□□ -1.7
DDX54-210ENST00000552375 KRTAP4-11Q9BYQ6 195 aa4.38□□□□□ -1.71
DDX54-210ENST00000552375 KRTAP9-6A8MVA2 160 aa4.29□□□□□ -1.72
DDX54-210ENST00000552375 MT1AP04731 61 aa4.25□□□□□ -1.73
DDX54-210ENST00000552375 KRTAP6-1Q3LI64 71 aa4.23□□□□□ -1.73
DDX54-210ENST00000552375 PRO0628Q9UI54 55 aa4.21□□□□□ -1.74
DDX54-210ENST00000552375 KRTAP5-2Q701N4 177 aa4.19□□□□□ -1.74
DDX54-210ENST00000552375 PMAIP1Q13794 54 aa4.17□□□□□ -1.74
DDX54-210ENST00000552375 PRAC1Q96KF2 57 aa4.08□□□□□ -1.76
DDX54-210ENST00000552375 KRTAP6-2Q3LI66 62 aa4.03□□□□□ -1.76
DDX54-210ENST00000552375 MUC5BQ9HC84 5762 aaPredicted RBP4.01□□□□□ -1.77
DDX54-210ENST00000552375 KRTAP5-8O75690 187 aa3.99□□□□□ -1.77
DDX54-210ENST00000552375 AHNAKQ09666 5890 aaKnown RBP3.98□□□□□ -1.77
DDX54-210ENST00000552375 MUC5ACP98088 5654 aa3.92□□□□□ -1.78
DDX54-210ENST00000552375 OBSCNQ5VST9 7968 aa3.9□□□□□ -1.79
DDX54-210ENST00000552375 MT3P25713 68 aa3.87□□□□□ -1.79
DDX54-210ENST00000552375 KTN1-AS1Q86SY8 53 aa3.85□□□□□ -1.79
DDX54-210ENST00000552375 H3BS24 57 aa3.84□□□□□ -1.79
DDX54-210ENST00000552375 KRTAP5-1Q6L8H4 278 aa3.76□□□□□ -1.81
DDX54-210ENST00000552375 LCE1EQ5T753 118 aa3.58□□□□□ -1.84
DDX54-210ENST00000552375 LCE1BQ5T7P3 118 aa3.35□□□□□ -1.87
DDX54-210ENST00000552375 LUZP6Q538Z0 58 aa3.33□□□□□ -1.88
DDX54-210ENST00000552375 LCE1CQ5T751 118 aa3.32□□□□□ -1.88
DDX54-210ENST00000552375 LCE3DQ9BYE3 92 aa3.27□□□□□ -1.89
DDX54-210ENST00000552375 LCE3EQ5T5B0 92 aa3.1□□□□□ -1.91
DDX54-210ENST00000552375 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.04□□□□□ -1.92
DDX54-210ENST00000552375 KRTAP5-11Q6L8G4 156 aa3.03□□□□□ -1.92
DDX54-210ENST00000552375 NDUFAF8A1L188 74 aa2.95□□□□□ -1.94
DDX54-210ENST00000552375 LCE1FQ5T754 118 aa2.94□□□□□ -1.94
DDX54-210ENST00000552375 KRTAP21-2Q3LI59 83 aa2.77□□□□□ -1.97
DDX54-210ENST00000552375 A0A0A0MQY5 61 aa2.76□□□□□ -1.97
DDX54-210ENST00000552375 PHGR1C9JFL3 82 aa2.66□□□□□ -1.98
DDX54-210ENST00000552375 INE1O15225 51 aa2.6□□□□□ -1.99
DDX54-210ENST00000552375 KRTAP4-4Q9BYR3 166 aa2.58□□□□□ -2
DDX54-210ENST00000552375 PRM1P04553 51 aa2.47□□□□□ -2.01
DDX54-210ENST00000552375 MUC19Q7Z5P9 8384 aa2.4□□□□□ -2.03
DDX54-210ENST00000552375 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.08
DDX54-210ENST00000552375 MUC16Q8WXI7 14507 aa1.7□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 72.3 ms