RNA–Protein interactions for RNA: ENST00000552341.5

PFDN5-216, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 1,980 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-216ENST00000552341 KRTAP9-6A0A140TA67 174 aa3.9□□□□□ -1.79
PFDN5-216ENST00000552341 KRTAP9-7A8MTY7 169 aa3.9□□□□□ -1.79
PFDN5-216ENST00000552341 KRTAP9-9Q9BYP9 154 aa3.86□□□□□ -1.79
PFDN5-216ENST00000552341 LCE4AQ5TA78 99 aa3.85□□□□□ -1.79
PFDN5-216ENST00000552341 MT1LQ93083 61 aa3.85□□□□□ -1.79
PFDN5-216ENST00000552341 LCE3CQ5T5A8 94 aa3.84□□□□□ -1.79
PFDN5-216ENST00000552341 MUC12Q9UKN1 5478 aa3.82□□□□□ -1.8
PFDN5-216ENST00000552341 KRTAP4-7Q9BYR0 210 aa3.78□□□□□ -1.8
PFDN5-216ENST00000552341 MACF1Q9UPN3 7388 aaKnown RBP3.75□□□□□ -1.81
PFDN5-216ENST00000552341 SPRR2FQ96RM1 72 aa3.75□□□□□ -1.81
PFDN5-216ENST00000552341 KRTAP19-3Q7Z4W3 81 aa3.74□□□□□ -1.81
PFDN5-216ENST00000552341 KRTAP5-9P26371 169 aa3.71□□□□□ -1.82
PFDN5-216ENST00000552341 KRTAP9-6A8MVA2 160 aa3.7□□□□□ -1.82
PFDN5-216ENST00000552341 MT1GP13640 62 aa3.7□□□□□ -1.82
PFDN5-216ENST00000552341 MT1MQ8N339 61 aa3.68□□□□□ -1.82
PFDN5-216ENST00000552341 MDN1Q9NU22 5596 aa3.66□□□□□ -1.82
PFDN5-216ENST00000552341 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.64□□□□□ -1.83
PFDN5-216ENST00000552341 KRTAP4-3Q9BYR4 195 aa3.64□□□□□ -1.83
PFDN5-216ENST00000552341 SYNE2Q8WXH0 6885 aaKnown RBP3.63□□□□□ -1.83
PFDN5-216ENST00000552341 LCE1AQ5T7P2 110 aa3.6□□□□□ -1.83
PFDN5-216ENST00000552341 KRTAP6-3Q3LI67 103 aa3.57□□□□□ -1.84
PFDN5-216ENST00000552341 LOC100996750A0A140TA64 210 aa3.54□□□□□ -1.84
PFDN5-216ENST00000552341 KRTAP2-3P0C7H8 128 aa3.52□□□□□ -1.85
PFDN5-216ENST00000552341 SPRR2EP22531 72 aa3.52□□□□□ -1.85
PFDN5-216ENST00000552341 SPRR2BP35325 72 aa3.52□□□□□ -1.85
PFDN5-216ENST00000552341 SPRR2AP35326 72 aa3.52□□□□□ -1.85
PFDN5-216ENST00000552341 KRTAP2-4Q9BYR9 128 aa3.52□□□□□ -1.85
PFDN5-216ENST00000552341 KRTAP2-1Q9BYU5 128 aa3.52□□□□□ -1.85
PFDN5-216ENST00000552341 KRTAP4-12Q9BQ66 201 aa3.51□□□□□ -1.85
PFDN5-216ENST00000552341 DSTQ03001 7570 aaKnown RBP3.44□□□□□ -1.86
PFDN5-216ENST00000552341 SPRR2DP22532 72 aa3.38□□□□□ -1.87
PFDN5-216ENST00000552341 LCE1FQ5T754 118 aa3.37□□□□□ -1.87
PFDN5-216ENST00000552341 MT3P25713 68 aa3.35□□□□□ -1.87
PFDN5-216ENST00000552341 KRTAP5-5Q701N2 237 aaPredicted RBP3.34□□□□□ -1.87
PFDN5-216ENST00000552341 KRTAP4-6Q9BYQ5 205 aa3.28□□□□□ -1.88
PFDN5-216ENST00000552341 MT1AP04731 61 aa3.26□□□□□ -1.89
PFDN5-216ENST00000552341 KRTAP6-1Q3LI64 71 aa3.26□□□□□ -1.89
PFDN5-216ENST00000552341 LCE3BQ5TA77 95 aa3.25□□□□□ -1.89
PFDN5-216ENST00000552341 NEBP20929 6669 aa3.23□□□□□ -1.89
PFDN5-216ENST00000552341 KRTAP2-2Q9BYT5 123 aa3.2□□□□□ -1.9
PFDN5-216ENST00000552341 KRTAP5-4Q6L8H1 288 aa3.13□□□□□ -1.91
PFDN5-216ENST00000552341 SYNE1Q8NF91 8797 aaKnown RBP3.12□□□□□ -1.91
PFDN5-216ENST00000552341 KRTAP12-4P60329 112 aa3.11□□□□□ -1.91
PFDN5-216ENST00000552341 KRTAP4-9Q9BYQ8 210 aa3.03□□□□□ -1.92
PFDN5-216ENST00000552341 LCE1DQ5T752 114 aa3□□□□□ -1.93
PFDN5-216ENST00000552341 KRTAP20-1Q3LI63 56 aa2.99□□□□□ -1.93
PFDN5-216ENST00000552341 KRTAP6-2Q3LI66 62 aa2.97□□□□□ -1.93
PFDN5-216ENST00000552341 MT4P47944 62 aa2.95□□□□□ -1.94
PFDN5-216ENST00000552341 KRTAP20-2Q3LI61 65 aa2.91□□□□□ -1.94
PFDN5-216ENST00000552341 HMCN1Q96RW7 5635 aa2.9□□□□□ -1.94
PFDN5-216ENST00000552341 LCE3DQ9BYE3 92 aa2.89□□□□□ -1.95
PFDN5-216ENST00000552341 LCE3EQ5T5B0 92 aa2.87□□□□□ -1.95
PFDN5-216ENST00000552341 KRTAP5-2Q701N4 177 aa2.86□□□□□ -1.95
PFDN5-216ENST00000552341 KRTAP4-11Q9BYQ6 195 aa2.85□□□□□ -1.95
PFDN5-216ENST00000552341 KRTAP5-3Q6L8H2 238 aa2.82□□□□□ -1.96
PFDN5-216ENST00000552341 PRM1P04553 51 aa2.76□□□□□ -1.97
PFDN5-216ENST00000552341 LCE1EQ5T753 118 aa2.71□□□□□ -1.98
PFDN5-216ENST00000552341 OBSCNQ5VST9 7968 aa2.7□□□□□ -1.98
PFDN5-216ENST00000552341 KRTAP4-2Q9BYR5 136 aa2.61□□□□□ -1.99
PFDN5-216ENST00000552341 GPR98Q8WXG9 6306 aa2.56□□□□□ -2
PFDN5-216ENST00000552341 AHNAK2Q8IVF2 5795 aa2.48□□□□□ -2.01
PFDN5-216ENST00000552341 KRTAP5-1Q6L8H4 278 aa2.47□□□□□ -2.01
PFDN5-216ENST00000552341 KRTAP5-10Q6L8G5 202 aa2.43□□□□□ -2.02
PFDN5-216ENST00000552341 MUC5ACP98088 5654 aa2.42□□□□□ -2.02
PFDN5-216ENST00000552341 KRTAP5-8O75690 187 aa2.42□□□□□ -2.02
PFDN5-216ENST00000552341 LCE1CQ5T751 118 aa2.38□□□□□ -2.03
PFDN5-216ENST00000552341 LCE1BQ5T7P3 118 aa2.38□□□□□ -2.03
PFDN5-216ENST00000552341 KRTAP5-7Q6L8G8 165 aa2.36□□□□□ -2.03
PFDN5-216ENST00000552341 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.24□□□□□ -2.05
PFDN5-216ENST00000552341 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
PFDN5-216ENST00000552341 MUC5BQ9HC84 5762 aaPredicted RBP2.1□□□□□ -2.07
PFDN5-216ENST00000552341 KRTAP5-11Q6L8G4 156 aa2.09□□□□□ -2.08
PFDN5-216ENST00000552341 AHNAKQ09666 5890 aaKnown RBP2.03□□□□□ -2.08
PFDN5-216ENST00000552341 KRTAP4-4Q9BYR3 166 aa1.89□□□□□ -2.11
PFDN5-216ENST00000552341 KRTAP21-1Q3LI58 79 aa1.84□□□□□ -2.11
PFDN5-216ENST00000552341 PHGR1C9JFL3 82 aa1.79□□□□□ -2.12
PFDN5-216ENST00000552341 MUC19Q7Z5P9 8384 aa1.6□□□□□ -2.15
PFDN5-216ENST00000552341 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 5.7 ms