RNA–Protein interactions for RNA: ENST00000552268.5

APAF1-211, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-211ENST00000552268 A0A1B0GU33 70 aa2.76□□□□□ -1.97
APAF1-211ENST00000552268 MT1XP80297 61 aa2.76□□□□□ -1.97
APAF1-211ENST00000552268 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
APAF1-211ENST00000552268 LCE1BQ5T7P3 118 aa2.76□□□□□ -1.97
APAF1-211ENST00000552268 A0A1B0GU69 56 aa2.75□□□□□ -1.97
APAF1-211ENST00000552268 A6NN06 94 aa2.75□□□□□ -1.97
APAF1-211ENST00000552268 LINC01554Q52M75 96 aa2.75□□□□□ -1.97
APAF1-211ENST00000552268 SPATA8Q6RVD6 105 aa2.75□□□□□ -1.97
APAF1-211ENST00000552268 RPS28P62857 69 aaKnown RBP2.73□□□□□ -1.97
APAF1-211ENST00000552268 PLAC4Q8WY50 150 aa2.73□□□□□ -1.97
APAF1-211ENST00000552268 SYNE2Q8WXH0 6885 aaKnown RBP2.73□□□□□ -1.97
APAF1-211ENST00000552268 PMAIP1Q13794 54 aa2.72□□□□□ -1.97
APAF1-211ENST00000552268 Q1T7F1 81 aa2.71□□□□□ -1.98
APAF1-211ENST00000552268 PRR15LQ9BU68 103 aa2.69□□□□□ -1.98
APAF1-211ENST00000552268 A0A0D9SG42 100 aa2.68□□□□□ -1.98
APAF1-211ENST00000552268 KRTAP12-1P59990 96 aa2.68□□□□□ -1.98
APAF1-211ENST00000552268 SPINT4Q6UDR6 99 aa2.66□□□□□ -1.98
APAF1-211ENST00000552268 PRO2289Q9P1D8 64 aa2.66□□□□□ -1.98
APAF1-211ENST00000552268 KRTAP5-8O75690 187 aa2.65□□□□□ -1.99
APAF1-211ENST00000552268 UQCR11O14957 56 aa2.63□□□□□ -1.99
APAF1-211ENST00000552268 KRTAP25-1Q3LHN0 102 aa2.62□□□□□ -1.99
APAF1-211ENST00000552268 KRTAP6-3Q3LI67 103 aa2.61□□□□□ -1.99
APAF1-211ENST00000552268 MIR22HGQ0VDD5 57 aa2.59□□□□□ -1.99
APAF1-211ENST00000552268 KMT2DO14686 5537 aa2.58□□□□□ -2
APAF1-211ENST00000552268 LCE3DQ9BYE3 92 aa2.58□□□□□ -2
APAF1-211ENST00000552268 C10orf95Q9H7T3 257 aa2.58□□□□□ -2
APAF1-211ENST00000552268 PP632Q6XCG6 107 aa2.56□□□□□ -2
APAF1-211ENST00000552268 NEBP20929 6669 aa2.55□□□□□ -2
APAF1-211ENST00000552268 KRTAP8-1Q8IUC2 63 aa2.52□□□□□ -2.01
APAF1-211ENST00000552268 KTN1-AS1Q86SY8 53 aa2.51□□□□□ -2.01
APAF1-211ENST00000552268 MUC12Q9UKN1 5478 aa2.51□□□□□ -2.01
APAF1-211ENST00000552268 CDC42SE1Q9NRR8 79 aa2.49□□□□□ -2.01
APAF1-211ENST00000552268 KRTAP19-7Q3SYF9 63 aa2.48□□□□□ -2.01
APAF1-211ENST00000552268 SPRR2FQ96RM1 72 aa2.48□□□□□ -2.01
APAF1-211ENST00000552268 TNP1P09430 55 aa2.46□□□□□ -2.02
APAF1-211ENST00000552268 MDN1Q9NU22 5596 aa2.45□□□□□ -2.02
APAF1-211ENST00000552268 BRK1Q8WUW1 75 aa2.45□□□□□ -2.02
APAF1-211ENST00000552268 MT1EP04732 61 aa2.43□□□□□ -2.02
APAF1-211ENST00000552268 KRTAP19-5Q3LI72 72 aa2.43□□□□□ -2.02
APAF1-211ENST00000552268 SPRR2EP22531 72 aa2.4□□□□□ -2.03
APAF1-211ENST00000552268 SPRR2BP35325 72 aa2.4□□□□□ -2.03
APAF1-211ENST00000552268 SPRR2AP35326 72 aa2.4□□□□□ -2.03
APAF1-211ENST00000552268 SPRR5A0A1B0GTR4 108 aa2.39□□□□□ -2.03
APAF1-211ENST00000552268 ROMO1P60602 79 aa2.38□□□□□ -2.03
APAF1-211ENST00000552268 KRTAP19-3Q7Z4W3 81 aa2.35□□□□□ -2.03
APAF1-211ENST00000552268 MT1LQ93083 61 aa2.35□□□□□ -2.03
APAF1-211ENST00000552268 HMCN1Q96RW7 5635 aa2.35□□□□□ -2.03
APAF1-211ENST00000552268 KRTAP12-3P60328 96 aa2.34□□□□□ -2.03
APAF1-211ENST00000552268 MUC19Q7Z5P9 8384 aa2.33□□□□□ -2.04
APAF1-211ENST00000552268 MT1GP13640 62 aa2.33□□□□□ -2.04
APAF1-211ENST00000552268 SPRR2DP22532 72 aa2.32□□□□□ -2.04
APAF1-211ENST00000552268 KRTAP2-3P0C7H8 128 aa2.31□□□□□ -2.04
APAF1-211ENST00000552268 KRTAP2-4Q9BYR9 128 aa2.31□□□□□ -2.04
APAF1-211ENST00000552268 KRTAP20-1Q3LI63 56 aa2.3□□□□□ -2.04
APAF1-211ENST00000552268 DSTQ03001 7570 aaKnown RBP2.29□□□□□ -2.04
APAF1-211ENST00000552268 MT1MQ8N339 61 aa2.29□□□□□ -2.04
APAF1-211ENST00000552268 KRTAP5-7Q6L8G8 165 aa2.27□□□□□ -2.05
APAF1-211ENST00000552268 KRTAP2-1Q9BYU5 128 aa2.25□□□□□ -2.05
APAF1-211ENST00000552268 GPR98Q8WXG9 6306 aa2.16□□□□□ -2.06
APAF1-211ENST00000552268 SYNE1Q8NF91 8797 aaKnown RBP2.03□□□□□ -2.09
APAF1-211ENST00000552268 MT4P47944 62 aa2.02□□□□□ -2.09
APAF1-211ENST00000552268 MT1AP04731 61 aa1.99□□□□□ -2.09
APAF1-211ENST00000552268 KRTAP6-1Q3LI64 71 aa1.98□□□□□ -2.09
APAF1-211ENST00000552268 KRTAP21-2Q3LI59 83 aa1.97□□□□□ -2.09
APAF1-211ENST00000552268 KRTAP20-2Q3LI61 65 aa1.96□□□□□ -2.1
APAF1-211ENST00000552268 KRTAP12-4P60329 112 aa1.94□□□□□ -2.1
APAF1-211ENST00000552268 AHNAK2Q8IVF2 5795 aa1.89□□□□□ -2.11
APAF1-211ENST00000552268 KRTAP6-2Q3LI66 62 aa1.85□□□□□ -2.11
APAF1-211ENST00000552268 INE1O15225 51 aa1.84□□□□□ -2.11
APAF1-211ENST00000552268 KRTAP5-10Q6L8G5 202 aa1.83□□□□□ -2.12
APAF1-211ENST00000552268 AHNAKQ09666 5890 aaKnown RBP1.63□□□□□ -2.15
APAF1-211ENST00000552268 MUC5ACP98088 5654 aa1.6□□□□□ -2.15
APAF1-211ENST00000552268 MUC5BQ9HC84 5762 aaPredicted RBP1.58□□□□□ -2.16
APAF1-211ENST00000552268 PRM1P04553 51 aa1.23□□□□□ -2.21
APAF1-211ENST00000552268 PHGR1C9JFL3 82 aa1.17□□□□□ -2.22
APAF1-211ENST00000552268 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
APAF1-211ENST00000552268 KRTAP21-1Q3LI58 79 aa0.77□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 15.2 ms