RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 TNP1P09430 55 aa4.75□□□□□ -1.65
CHMP1A-210ENST00000551981 SERP2Q8N6R1 65 aa4.75□□□□□ -1.65
CHMP1A-210ENST00000551981 KRTAP4-7Q9BYR0 210 aa4.71□□□□□ -1.66
CHMP1A-210ENST00000551981 SMIM26A0A096LP01 95 aa4.69□□□□□ -1.66
CHMP1A-210ENST00000551981 KRTAP12-4P60329 112 aa4.69□□□□□ -1.66
CHMP1A-210ENST00000551981 COX7CP15954 63 aa4.68□□□□□ -1.66
CHMP1A-210ENST00000551981 KRTAP5-5Q701N2 237 aaPredicted RBP4.67□□□□□ -1.66
CHMP1A-210ENST00000551981 KRTAP12-3P60328 96 aa4.64□□□□□ -1.67
CHMP1A-210ENST00000551981 ANAPC13Q9BS18 74 aa4.62□□□□□ -1.67
CHMP1A-210ENST00000551981 SYNE1Q8NF91 8797 aaKnown RBP4.61□□□□□ -1.67
CHMP1A-210ENST00000551981 A8MU10 97 aa4.6□□□□□ -1.67
CHMP1A-210ENST00000551981 H7BZZ5 65 aa4.56□□□□□ -1.68
CHMP1A-210ENST00000551981 A0A1B0GU69 56 aa4.55□□□□□ -1.68
CHMP1A-210ENST00000551981 AHNAKQ09666 5890 aaKnown RBP4.54□□□□□ -1.68
CHMP1A-210ENST00000551981 CCDC179H3BU77 68 aa4.54□□□□□ -1.68
CHMP1A-210ENST00000551981 LOC100996750A0A140TA64 210 aa4.49□□□□□ -1.69
CHMP1A-210ENST00000551981 KRTAP4-11Q9BYQ6 195 aa4.47□□□□□ -1.69
CHMP1A-210ENST00000551981 MUC5ACP98088 5654 aa4.44□□□□□ -1.7
CHMP1A-210ENST00000551981 MUC5BQ9HC84 5762 aaPredicted RBP4.44□□□□□ -1.7
CHMP1A-210ENST00000551981 ATP5EP56381 51 aaPredicted RBP4.41□□□□□ -1.7
CHMP1A-210ENST00000551981 TMEM258P61165 79 aa4.39□□□□□ -1.71
CHMP1A-210ENST00000551981 KRTAP19-4Q3LI73 84 aa4.38□□□□□ -1.71
CHMP1A-210ENST00000551981 KRTAP5-2Q701N4 177 aa4.35□□□□□ -1.71
CHMP1A-210ENST00000551981 PRR15LQ9BU68 103 aa4.34□□□□□ -1.71
CHMP1A-210ENST00000551981 KRTAP5-8O75690 187 aa4.31□□□□□ -1.72
CHMP1A-210ENST00000551981 PCP4P48539 62 aa4.31□□□□□ -1.72
CHMP1A-210ENST00000551981 KRTAP25-1Q3LHN0 102 aa4.29□□□□□ -1.72
CHMP1A-210ENST00000551981 MT1AP04731 61 aa4.26□□□□□ -1.73
CHMP1A-210ENST00000551981 KRTAP6-1Q3LI64 71 aa4.24□□□□□ -1.73
CHMP1A-210ENST00000551981 LCE3CQ5T5A8 94 aa4.23□□□□□ -1.73
CHMP1A-210ENST00000551981 OBSCNQ5VST9 7968 aa4.23□□□□□ -1.73
CHMP1A-210ENST00000551981 KRTAP15-1Q3LI76 137 aa4.21□□□□□ -1.74
CHMP1A-210ENST00000551981 LINC01558Q9Y6Z2 57 aa4.2□□□□□ -1.74
CHMP1A-210ENST00000551981 KRTAP9-9Q9BYP9 154 aa4.19□□□□□ -1.74
CHMP1A-210ENST00000551981 UQCR11O14957 56 aa4.16□□□□□ -1.74
CHMP1A-210ENST00000551981 KRTAP9-4Q9BYQ2 154 aa4.15□□□□□ -1.75
CHMP1A-210ENST00000551981 RPS28P62857 69 aaKnown RBP4.14□□□□□ -1.75
CHMP1A-210ENST00000551981 KRTAP6-2Q3LI66 62 aa4.14□□□□□ -1.75
CHMP1A-210ENST00000551981 KRTAP23-1A1A580 65 aa4.1□□□□□ -1.75
CHMP1A-210ENST00000551981 Q1T7F1 81 aa4.1□□□□□ -1.75
CHMP1A-210ENST00000551981 V9GYY9 64 aa4.1□□□□□ -1.75
CHMP1A-210ENST00000551981 K7ERS5 55 aa4.07□□□□□ -1.76
CHMP1A-210ENST00000551981 MIR22HGQ0VDD5 57 aa4.02□□□□□ -1.77
CHMP1A-210ENST00000551981 PSPHP1O15172 72 aa4□□□□□ -1.77
CHMP1A-210ENST00000551981 KRTAP9-6A8MVA2 160 aa3.96□□□□□ -1.78
CHMP1A-210ENST00000551981 KRTAP5-1Q6L8H4 278 aa3.96□□□□□ -1.78
CHMP1A-210ENST00000551981 MT3P25713 68 aa3.93□□□□□ -1.78
CHMP1A-210ENST00000551981 A6NED7 52 aa3.88□□□□□ -1.79
CHMP1A-210ENST00000551981 CDC42SE1Q9NRR8 79 aa3.8□□□□□ -1.8
CHMP1A-210ENST00000551981 LCE1EQ5T753 118 aa3.69□□□□□ -1.82
CHMP1A-210ENST00000551981 ROMO1P60602 79 aa3.68□□□□□ -1.82
CHMP1A-210ENST00000551981 BRK1Q8WUW1 75 aa3.61□□□□□ -1.83
CHMP1A-210ENST00000551981 LCE1BQ5T7P3 118 aa3.51□□□□□ -1.85
CHMP1A-210ENST00000551981 KRTAP4-2Q9BYR5 136 aa3.49□□□□□ -1.85
CHMP1A-210ENST00000551981 PMAIP1Q13794 54 aa3.42□□□□□ -1.86
CHMP1A-210ENST00000551981 LCE1CQ5T751 118 aa3.42□□□□□ -1.86
CHMP1A-210ENST00000551981 PRO0628Q9UI54 55 aa3.42□□□□□ -1.86
CHMP1A-210ENST00000551981 SVIPQ8NHG7 77 aa3.3□□□□□ -1.88
CHMP1A-210ENST00000551981 KRTAP4-12Q9BQ66 201 aa3.3□□□□□ -1.88
CHMP1A-210ENST00000551981 PRAC1Q96KF2 57 aa3.23□□□□□ -1.89
CHMP1A-210ENST00000551981 KTN1-AS1Q86SY8 53 aa3.2□□□□□ -1.9
CHMP1A-210ENST00000551981 LCE1FQ5T754 118 aa3.15□□□□□ -1.91
CHMP1A-210ENST00000551981 KRTAP5-11Q6L8G4 156 aa3.15□□□□□ -1.91
CHMP1A-210ENST00000551981 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.06□□□□□ -1.92
CHMP1A-210ENST00000551981 PHGR1C9JFL3 82 aa3.02□□□□□ -1.93
CHMP1A-210ENST00000551981 LCE3DQ9BYE3 92 aa2.99□□□□□ -1.93
CHMP1A-210ENST00000551981 KRTAP21-2Q3LI59 83 aa2.8□□□□□ -1.96
CHMP1A-210ENST00000551981 LCE3EQ5T5B0 92 aa2.74□□□□□ -1.97
CHMP1A-210ENST00000551981 LUZP6Q538Z0 58 aa2.67□□□□□ -1.98
CHMP1A-210ENST00000551981 MUC19Q7Z5P9 8384 aa2.64□□□□□ -1.99
CHMP1A-210ENST00000551981 KRTAP4-4Q9BYR3 166 aa2.62□□□□□ -1.99
CHMP1A-210ENST00000551981 NDUFAF8A1L188 74 aa2.4□□□□□ -2.03
CHMP1A-210ENST00000551981 KRTAP21-1Q3LI58 79 aa2.31□□□□□ -2.04
CHMP1A-210ENST00000551981 H3BS24 57 aa2.26□□□□□ -2.05
CHMP1A-210ENST00000551981 A0A0A0MQY5 61 aa2.03□□□□□ -2.08
CHMP1A-210ENST00000551981 INE1O15225 51 aa2□□□□□ -2.09
CHMP1A-210ENST00000551981 PRM1P04553 51 aa1.86□□□□□ -2.11
CHMP1A-210ENST00000551981 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 85.3 ms