RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 K7ERU9 68 aa7.14□□□□□ -1.27
SMARCD1-212ENST00000551966 COA5Q86WW8 74 aa7.13□□□□□ -1.27
SMARCD1-212ENST00000551966 TNP1P09430 55 aa7.09□□□□□ -1.27
SMARCD1-212ENST00000551966 KRTAP12-4P60329 112 aa7.07□□□□□ -1.28
SMARCD1-212ENST00000551966 SERP2Q8N6R1 65 aa7.01□□□□□ -1.29
SMARCD1-212ENST00000551966 KRTAP12-3P60328 96 aa7□□□□□ -1.29
SMARCD1-212ENST00000551966 A8MU10 97 aa6.98□□□□□ -1.29
SMARCD1-212ENST00000551966 SYNE1Q8NF91 8797 aaKnown RBP6.95□□□□□ -1.3
SMARCD1-212ENST00000551966 LOC100996750A0A140TA64 210 aa6.95□□□□□ -1.3
SMARCD1-212ENST00000551966 SMIM26A0A096LP01 95 aa6.93□□□□□ -1.3
SMARCD1-212ENST00000551966 KRTAP4-11Q9BYQ6 195 aa6.84□□□□□ -1.31
SMARCD1-212ENST00000551966 A0A1B0GU69 56 aa6.75□□□□□ -1.33
SMARCD1-212ENST00000551966 COX7CP15954 63 aa6.75□□□□□ -1.33
SMARCD1-212ENST00000551966 H7BZZ5 65 aa6.72□□□□□ -1.33
SMARCD1-212ENST00000551966 KRTAP5-2Q701N4 177 aa6.68□□□□□ -1.34
SMARCD1-212ENST00000551966 KRTAP5-8O75690 187 aa6.64□□□□□ -1.35
SMARCD1-212ENST00000551966 MUC5ACP98088 5654 aa6.59□□□□□ -1.35
SMARCD1-212ENST00000551966 AHNAKQ09666 5890 aaKnown RBP6.59□□□□□ -1.36
SMARCD1-212ENST00000551966 MUC5BQ9HC84 5762 aaPredicted RBP6.54□□□□□ -1.36
SMARCD1-212ENST00000551966 KRTAP19-4Q3LI73 84 aa6.52□□□□□ -1.37
SMARCD1-212ENST00000551966 KRTAP6-1Q3LI64 71 aa6.51□□□□□ -1.37
SMARCD1-212ENST00000551966 MT1AP04731 61 aa6.48□□□□□ -1.37
SMARCD1-212ENST00000551966 LCE3CQ5T5A8 94 aa6.41□□□□□ -1.38
SMARCD1-212ENST00000551966 ANAPC13Q9BS18 74 aa6.41□□□□□ -1.38
SMARCD1-212ENST00000551966 CCDC179H3BU77 68 aa6.38□□□□□ -1.39
SMARCD1-212ENST00000551966 KRTAP25-1Q3LHN0 102 aa6.38□□□□□ -1.39
SMARCD1-212ENST00000551966 KRTAP15-1Q3LI76 137 aa6.35□□□□□ -1.39
SMARCD1-212ENST00000551966 KRTAP9-9Q9BYP9 154 aa6.35□□□□□ -1.39
SMARCD1-212ENST00000551966 KRTAP9-4Q9BYQ2 154 aa6.35□□□□□ -1.39
SMARCD1-212ENST00000551966 OBSCNQ5VST9 7968 aa6.34□□□□□ -1.39
SMARCD1-212ENST00000551966 KRTAP6-2Q3LI66 62 aa6.33□□□□□ -1.4
SMARCD1-212ENST00000551966 PRR15LQ9BU68 103 aa6.32□□□□□ -1.4
SMARCD1-212ENST00000551966 LINC01558Q9Y6Z2 57 aa6.25□□□□□ -1.41
SMARCD1-212ENST00000551966 ATP5EP56381 51 aaPredicted RBP6.18□□□□□ -1.42
SMARCD1-212ENST00000551966 KRTAP9-6A8MVA2 160 aa6.14□□□□□ -1.43
SMARCD1-212ENST00000551966 H3BS24 57 aa6.14□□□□□ -1.43
SMARCD1-212ENST00000551966 UQCR11O14957 56 aa6.14□□□□□ -1.43
SMARCD1-212ENST00000551966 KRTAP23-1A1A580 65 aa6.13□□□□□ -1.43
SMARCD1-212ENST00000551966 KRTAP5-1Q6L8H4 278 aa6.12□□□□□ -1.43
SMARCD1-212ENST00000551966 TMEM258P61165 79 aa5.99□□□□□ -1.45
SMARCD1-212ENST00000551966 MIR22HGQ0VDD5 57 aa5.98□□□□□ -1.45
SMARCD1-212ENST00000551966 MT3P25713 68 aa5.94□□□□□ -1.46
SMARCD1-212ENST00000551966 K7ERS5 55 aa5.88□□□□□ -1.47
SMARCD1-212ENST00000551966 PSPHP1O15172 72 aa5.84□□□□□ -1.47
SMARCD1-212ENST00000551966 Q1T7F1 81 aa5.69□□□□□ -1.5
SMARCD1-212ENST00000551966 V9GYY9 64 aa5.66□□□□□ -1.5
SMARCD1-212ENST00000551966 RPS28P62857 69 aaKnown RBP5.64□□□□□ -1.51
SMARCD1-212ENST00000551966 LCE1EQ5T753 118 aa5.6□□□□□ -1.51
SMARCD1-212ENST00000551966 KRTAP4-12Q9BQ66 201 aa5.59□□□□□ -1.51
SMARCD1-212ENST00000551966 A6NED7 52 aa5.57□□□□□ -1.52
SMARCD1-212ENST00000551966 CDC42SE1Q9NRR8 79 aa5.52□□□□□ -1.53
SMARCD1-212ENST00000551966 ROMO1P60602 79 aa5.47□□□□□ -1.53
SMARCD1-212ENST00000551966 KRTAP4-2Q9BYR5 136 aa5.4□□□□□ -1.54
SMARCD1-212ENST00000551966 PCP4P48539 62 aa5.34□□□□□ -1.55
SMARCD1-212ENST00000551966 LCE1BQ5T7P3 118 aa5.33□□□□□ -1.56
SMARCD1-212ENST00000551966 LCE1CQ5T751 118 aa5.21□□□□□ -1.58
SMARCD1-212ENST00000551966 KRTAP5-11Q6L8G4 156 aa4.82□□□□□ -1.64
SMARCD1-212ENST00000551966 LCE1FQ5T754 118 aa4.75□□□□□ -1.65
SMARCD1-212ENST00000551966 SVIPQ8NHG7 77 aa4.73□□□□□ -1.65
SMARCD1-212ENST00000551966 BRK1Q8WUW1 75 aa4.72□□□□□ -1.65
SMARCD1-212ENST00000551966 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.66□□□□□ -1.66
SMARCD1-212ENST00000551966 PHGR1C9JFL3 82 aa4.58□□□□□ -1.68
SMARCD1-212ENST00000551966 LCE3DQ9BYE3 92 aa4.48□□□□□ -1.69
SMARCD1-212ENST00000551966 PMAIP1Q13794 54 aa4.4□□□□□ -1.71
SMARCD1-212ENST00000551966 KRTAP21-2Q3LI59 83 aa4.31□□□□□ -1.72
SMARCD1-212ENST00000551966 PRAC1Q96KF2 57 aa4.31□□□□□ -1.72
SMARCD1-212ENST00000551966 A0A0A0MQY5 61 aa4.21□□□□□ -1.74
SMARCD1-212ENST00000551966 LCE3EQ5T5B0 92 aa4.12□□□□□ -1.75
SMARCD1-212ENST00000551966 PRO0628Q9UI54 55 aa4.1□□□□□ -1.75
SMARCD1-212ENST00000551966 KRTAP4-4Q9BYR3 166 aa4.05□□□□□ -1.76
SMARCD1-212ENST00000551966 MUC19Q7Z5P9 8384 aa3.94□□□□□ -1.78
SMARCD1-212ENST00000551966 KTN1-AS1Q86SY8 53 aa3.94□□□□□ -1.78
SMARCD1-212ENST00000551966 LUZP6Q538Z0 58 aa3.55□□□□□ -1.84
SMARCD1-212ENST00000551966 KRTAP21-1Q3LI58 79 aa3.47□□□□□ -1.85
SMARCD1-212ENST00000551966 NDUFAF8A1L188 74 aa3.26□□□□□ -1.89
SMARCD1-212ENST00000551966 PRM1P04553 51 aa2.83□□□□□ -1.96
SMARCD1-212ENST00000551966 MUC16Q8WXI7 14507 aa2.77□□□□□ -1.97
SMARCD1-212ENST00000551966 INE1O15225 51 aa2.28□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 98.1 ms