RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 KRTAP5-5Q701N2 237 aaPredicted RBP5.07□□□□□ -1.6
CACNB3-220ENST00000551716 C10orf95Q9H7T3 257 aa5.06□□□□□ -1.6
CACNB3-220ENST00000551716 KRTAP4-11Q9BYQ6 195 aa5.03□□□□□ -1.6
CACNB3-220ENST00000551716 PCP4P48539 62 aa5.02□□□□□ -1.61
CACNB3-220ENST00000551716 MUC5ACP98088 5654 aa5.02□□□□□ -1.61
CACNB3-220ENST00000551716 KRTAP4-7Q9BYR0 210 aa5□□□□□ -1.61
CACNB3-220ENST00000551716 SPINT4Q6UDR6 99 aa4.99□□□□□ -1.61
CACNB3-220ENST00000551716 SPANXA2-OT1Q8N9U9 137 aa4.99□□□□□ -1.61
CACNB3-220ENST00000551716 H7BZZ5 65 aa4.98□□□□□ -1.61
CACNB3-220ENST00000551716 LCE3AQ5TA76 89 aa4.97□□□□□ -1.61
CACNB3-220ENST00000551716 SYNE1Q8NF91 8797 aaKnown RBP4.96□□□□□ -1.62
CACNB3-220ENST00000551716 MUC5BQ9HC84 5762 aaPredicted RBP4.95□□□□□ -1.62
CACNB3-220ENST00000551716 ATP5EP56381 51 aaPredicted RBP4.93□□□□□ -1.62
CACNB3-220ENST00000551716 TMEM258P61165 79 aa4.93□□□□□ -1.62
CACNB3-220ENST00000551716 TNP1P09430 55 aa4.88□□□□□ -1.63
CACNB3-220ENST00000551716 KRTAP5-8O75690 187 aa4.86□□□□□ -1.63
CACNB3-220ENST00000551716 KRTAP12-1P59990 96 aa4.86□□□□□ -1.63
CACNB3-220ENST00000551716 COA5Q86WW8 74 aa4.86□□□□□ -1.63
CACNB3-220ENST00000551716 KRTAP9-9Q9BYP9 154 aa4.85□□□□□ -1.63
CACNB3-220ENST00000551716 KRTAP9-4Q9BYQ2 154 aa4.85□□□□□ -1.63
CACNB3-220ENST00000551716 SEC61GP60059 68 aa4.83□□□□□ -1.64
CACNB3-220ENST00000551716 KRTAP12-3P60328 96 aa4.83□□□□□ -1.64
CACNB3-220ENST00000551716 SPATA8Q6RVD6 105 aa4.83□□□□□ -1.64
CACNB3-220ENST00000551716 SERP1Q9Y6X1 66 aa4.82□□□□□ -1.64
CACNB3-220ENST00000551716 KRTAP5-2Q701N4 177 aa4.78□□□□□ -1.64
CACNB3-220ENST00000551716 A0A1B0GU33 70 aa4.75□□□□□ -1.65
CACNB3-220ENST00000551716 SMIM26A0A096LP01 95 aa4.66□□□□□ -1.66
CACNB3-220ENST00000551716 A0A1B0GU69 56 aa4.64□□□□□ -1.67
CACNB3-220ENST00000551716 PRR15LQ9BU68 103 aa4.64□□□□□ -1.67
CACNB3-220ENST00000551716 RPS28P62857 69 aaKnown RBP4.63□□□□□ -1.67
CACNB3-220ENST00000551716 V9GYY9 64 aa4.62□□□□□ -1.67
CACNB3-220ENST00000551716 OBSCNQ5VST9 7968 aa4.61□□□□□ -1.67
CACNB3-220ENST00000551716 LINC01558Q9Y6Z2 57 aa4.59□□□□□ -1.67
CACNB3-220ENST00000551716 MT1AP04731 61 aa4.55□□□□□ -1.68
CACNB3-220ENST00000551716 Q1T7F1 81 aa4.54□□□□□ -1.68
CACNB3-220ENST00000551716 KRTAP6-1Q3LI64 71 aa4.53□□□□□ -1.68
CACNB3-220ENST00000551716 PSPHP1O15172 72 aa4.52□□□□□ -1.69
CACNB3-220ENST00000551716 A8MU10 97 aa4.51□□□□□ -1.69
CACNB3-220ENST00000551716 KRTAP6-2Q3LI66 62 aa4.48□□□□□ -1.69
CACNB3-220ENST00000551716 KRTAP23-1A1A580 65 aa4.47□□□□□ -1.69
CACNB3-220ENST00000551716 UQCR11O14957 56 aa4.45□□□□□ -1.7
CACNB3-220ENST00000551716 A6NED7 52 aa4.42□□□□□ -1.7
CACNB3-220ENST00000551716 KRTAP25-1Q3LHN0 102 aa4.4□□□□□ -1.71
CACNB3-220ENST00000551716 KRTAP5-1Q6L8H4 278 aa4.4□□□□□ -1.71
CACNB3-220ENST00000551716 MIR22HGQ0VDD5 57 aa4.39□□□□□ -1.71
CACNB3-220ENST00000551716 LCE3CQ5T5A8 94 aa4.39□□□□□ -1.71
CACNB3-220ENST00000551716 KRTAP4-2Q9BYR5 136 aa4.36□□□□□ -1.71
CACNB3-220ENST00000551716 KRTAP15-1Q3LI76 137 aa4.31□□□□□ -1.72
CACNB3-220ENST00000551716 K7ERS5 55 aa4.3□□□□□ -1.72
CACNB3-220ENST00000551716 CDC42SE1Q9NRR8 79 aa4.27□□□□□ -1.73
CACNB3-220ENST00000551716 MT3P25713 68 aa4.24□□□□□ -1.73
CACNB3-220ENST00000551716 BRK1Q8WUW1 75 aa4.24□□□□□ -1.73
CACNB3-220ENST00000551716 KRTAP9-6A8MVA2 160 aa4.08□□□□□ -1.76
CACNB3-220ENST00000551716 LCE1EQ5T753 118 aa4.06□□□□□ -1.76
CACNB3-220ENST00000551716 ROMO1P60602 79 aa4.01□□□□□ -1.77
CACNB3-220ENST00000551716 PRO0628Q9UI54 55 aa4□□□□□ -1.77
CACNB3-220ENST00000551716 PMAIP1Q13794 54 aa3.99□□□□□ -1.77
CACNB3-220ENST00000551716 LCE1BQ5T7P3 118 aa3.82□□□□□ -1.8
CACNB3-220ENST00000551716 KTN1-AS1Q86SY8 53 aa3.76□□□□□ -1.81
CACNB3-220ENST00000551716 LCE1CQ5T751 118 aa3.75□□□□□ -1.81
CACNB3-220ENST00000551716 PRAC1Q96KF2 57 aa3.73□□□□□ -1.81
CACNB3-220ENST00000551716 SVIPQ8NHG7 77 aa3.7□□□□□ -1.82
CACNB3-220ENST00000551716 LCE1FQ5T754 118 aa3.54□□□□□ -1.84
CACNB3-220ENST00000551716 KRTAP5-11Q6L8G4 156 aa3.54□□□□□ -1.84
CACNB3-220ENST00000551716 PHGR1C9JFL3 82 aa3.46□□□□□ -1.86
CACNB3-220ENST00000551716 A0A0A0MQY5 61 aa3.36□□□□□ -1.87
CACNB3-220ENST00000551716 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.33□□□□□ -1.88
CACNB3-220ENST00000551716 LUZP6Q538Z0 58 aa3.15□□□□□ -1.91
CACNB3-220ENST00000551716 LCE3DQ9BYE3 92 aa3.06□□□□□ -1.92
CACNB3-220ENST00000551716 KRTAP21-2Q3LI59 83 aa3.01□□□□□ -1.93
CACNB3-220ENST00000551716 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.94
CACNB3-220ENST00000551716 NDUFAF8A1L188 74 aa2.89□□□□□ -1.95
CACNB3-220ENST00000551716 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
CACNB3-220ENST00000551716 LCE3EQ5T5B0 92 aa2.77□□□□□ -1.97
CACNB3-220ENST00000551716 KRTAP21-1Q3LI58 79 aa2.67□□□□□ -1.98
CACNB3-220ENST00000551716 INE1O15225 51 aa2.39□□□□□ -2.03
CACNB3-220ENST00000551716 PRM1P04553 51 aa2.08□□□□□ -2.08
CACNB3-220ENST00000551716 MUC16Q8WXI7 14507 aa2.02□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 57.1 ms