RNA–Protein interactions for RNA: ENST00000551634.5

NPAS3-211, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5

Gene NPAS3, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-211ENST00000551634 KRTAP9-6A0A140TA67 174 aa8.35□□□□□ -1.07
NPAS3-211ENST00000551634 KRTAP2-3P0C7H8 128 aa8.22□□□□□ -1.09
NPAS3-211ENST00000551634 KRTAP2-4Q9BYR9 128 aa8.22□□□□□ -1.09
NPAS3-211ENST00000551634 KRTAP2-1Q9BYU5 128 aa8.22□□□□□ -1.09
NPAS3-211ENST00000551634 MT1LQ93083 61 aa8.14□□□□□ -1.11
NPAS3-211ENST00000551634 KRTAP4-7Q9BYR0 210 aa8.14□□□□□ -1.11
NPAS3-211ENST00000551634 MT1EP04732 61 aa8.11□□□□□ -1.11
NPAS3-211ENST00000551634 MUC12Q9UKN1 5478 aa8.05□□□□□ -1.12
NPAS3-211ENST00000551634 KRTAP19-6Q3LI70 58 aa8.03□□□□□ -1.12
NPAS3-211ENST00000551634 MDN1Q9NU22 5596 aa7.94□□□□□ -1.14
NPAS3-211ENST00000551634 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.85□□□□□ -1.15
NPAS3-211ENST00000551634 DSTQ03001 7570 aaKnown RBP7.68□□□□□ -1.18
NPAS3-211ENST00000551634 KRTAP9-7A8MTY7 169 aa7.63□□□□□ -1.19
NPAS3-211ENST00000551634 LOC100996750A0A140TA64 210 aa7.58□□□□□ -1.2
NPAS3-211ENST00000551634 MT1GP13640 62 aa7.58□□□□□ -1.2
NPAS3-211ENST00000551634 KRTAP4-3Q9BYR4 195 aa7.57□□□□□ -1.2
NPAS3-211ENST00000551634 MT1MQ8N339 61 aa7.57□□□□□ -1.2
NPAS3-211ENST00000551634 KRTAP19-3Q7Z4W3 81 aa7.56□□□□□ -1.2
NPAS3-211ENST00000551634 SPRR2FQ96RM1 72 aa7.44□□□□□ -1.22
NPAS3-211ENST00000551634 NEBP20929 6669 aa7.29□□□□□ -1.24
NPAS3-211ENST00000551634 LCE5AQ5TCM9 118 aa7.28□□□□□ -1.24
NPAS3-211ENST00000551634 KRTAP12-4P60329 112 aa7.25□□□□□ -1.25
NPAS3-211ENST00000551634 KRTAP6-3Q3LI67 103 aa7.23□□□□□ -1.25
NPAS3-211ENST00000551634 KRTAP5-9P26371 169 aa7.13□□□□□ -1.27
NPAS3-211ENST00000551634 SPRR2EP22531 72 aa7.12□□□□□ -1.27
NPAS3-211ENST00000551634 SPRR2BP35325 72 aa7.12□□□□□ -1.27
NPAS3-211ENST00000551634 SPRR2AP35326 72 aa7.12□□□□□ -1.27
NPAS3-211ENST00000551634 LCE1AQ5T7P2 110 aa7.02□□□□□ -1.29
NPAS3-211ENST00000551634 LCE3BQ5TA77 95 aa7□□□□□ -1.29
NPAS3-211ENST00000551634 MT1AP04731 61 aa6.99□□□□□ -1.29
NPAS3-211ENST00000551634 KRTAP6-1Q3LI64 71 aa6.87□□□□□ -1.31
NPAS3-211ENST00000551634 KRTAP4-9Q9BYQ8 210 aa6.84□□□□□ -1.31
NPAS3-211ENST00000551634 SPRR2DP22532 72 aa6.82□□□□□ -1.32
NPAS3-211ENST00000551634 LCE3DQ9BYE3 92 aa6.75□□□□□ -1.33
NPAS3-211ENST00000551634 SYNE1Q8NF91 8797 aaKnown RBP6.74□□□□□ -1.33
NPAS3-211ENST00000551634 LCE3EQ5T5B0 92 aa6.69□□□□□ -1.34
NPAS3-211ENST00000551634 KRTAP5-5Q701N2 237 aaPredicted RBP6.69□□□□□ -1.34
NPAS3-211ENST00000551634 KRTAP20-1Q3LI63 56 aa6.61□□□□□ -1.35
NPAS3-211ENST00000551634 OBSCNQ5VST9 7968 aa6.55□□□□□ -1.36
NPAS3-211ENST00000551634 KRTAP9-4Q9BYQ2 154 aa6.43□□□□□ -1.38
NPAS3-211ENST00000551634 PRM1P04553 51 aa6.41□□□□□ -1.38
NPAS3-211ENST00000551634 KRTAP2-2Q9BYT5 123 aa6.3□□□□□ -1.4
NPAS3-211ENST00000551634 HMCN1Q96RW7 5635 aa6.24□□□□□ -1.41
NPAS3-211ENST00000551634 MT4P47944 62 aa6.21□□□□□ -1.41
NPAS3-211ENST00000551634 KRTAP6-2Q3LI66 62 aa6.2□□□□□ -1.42
NPAS3-211ENST00000551634 MT3P25713 68 aa6.17□□□□□ -1.42
NPAS3-211ENST00000551634 KRTAP4-6Q9BYQ5 205 aa6.05□□□□□ -1.44
NPAS3-211ENST00000551634 LCE1DQ5T752 114 aa6.01□□□□□ -1.45
NPAS3-211ENST00000551634 KRTAP5-4Q6L8H1 288 aa5.81□□□□□ -1.48
NPAS3-211ENST00000551634 LCE1EQ5T753 118 aa5.72□□□□□ -1.49
NPAS3-211ENST00000551634 LCE4AQ5TA78 99 aa5.7□□□□□ -1.5
NPAS3-211ENST00000551634 KRTAP20-2Q3LI61 65 aa5.61□□□□□ -1.51
NPAS3-211ENST00000551634 GPR98Q8WXG9 6306 aa5.59□□□□□ -1.51
NPAS3-211ENST00000551634 AHNAK2Q8IVF2 5795 aa5.57□□□□□ -1.52
NPAS3-211ENST00000551634 LCE1FQ5T754 118 aa5.49□□□□□ -1.53
NPAS3-211ENST00000551634 KRTAP5-2Q701N4 177 aa5.47□□□□□ -1.53
NPAS3-211ENST00000551634 KRTAP5-3Q6L8H2 238 aa5.35□□□□□ -1.55
NPAS3-211ENST00000551634 KRTAP5-10Q6L8G5 202 aa5.13□□□□□ -1.59
NPAS3-211ENST00000551634 MUC5ACP98088 5654 aa5.13□□□□□ -1.59
NPAS3-211ENST00000551634 KRTAP4-11Q9BYQ6 195 aa5.02□□□□□ -1.61
NPAS3-211ENST00000551634 MUC5BQ9HC84 5762 aaPredicted RBP4.87□□□□□ -1.63
NPAS3-211ENST00000551634 KRTAP5-1Q6L8H4 278 aa4.86□□□□□ -1.63
NPAS3-211ENST00000551634 LCE1BQ5T7P3 118 aa4.85□□□□□ -1.63
NPAS3-211ENST00000551634 KRTAP5-8O75690 187 aa4.82□□□□□ -1.64
NPAS3-211ENST00000551634 LCE1CQ5T751 118 aa4.74□□□□□ -1.65
NPAS3-211ENST00000551634 KRTAP4-2Q9BYR5 136 aa4.71□□□□□ -1.66
NPAS3-211ENST00000551634 KRTAP5-7Q6L8G8 165 aa4.67□□□□□ -1.66
NPAS3-211ENST00000551634 KRTAP9-9Q9BYP9 154 aa4.55□□□□□ -1.68
NPAS3-211ENST00000551634 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.52□□□□□ -1.69
NPAS3-211ENST00000551634 KRTAP21-2Q3LI59 83 aa4.45□□□□□ -1.7
NPAS3-211ENST00000551634 AHNAKQ09666 5890 aaKnown RBP4.33□□□□□ -1.72
NPAS3-211ENST00000551634 KRTAP4-12Q9BQ66 201 aa4.2□□□□□ -1.74
NPAS3-211ENST00000551634 KRTAP21-1Q3LI58 79 aa4.11□□□□□ -1.75
NPAS3-211ENST00000551634 MUC19Q7Z5P9 8384 aa4.07□□□□□ -1.76
NPAS3-211ENST00000551634 KRTAP5-11Q6L8G4 156 aa4.06□□□□□ -1.76
NPAS3-211ENST00000551634 KRTAP4-4Q9BYR3 166 aa3.96□□□□□ -1.78
NPAS3-211ENST00000551634 PHGR1C9JFL3 82 aa3.49□□□□□ -1.85
NPAS3-211ENST00000551634 MUC16Q8WXI7 14507 aa2.36□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 83.5 ms