RNA–Protein interactions for RNA: ENST00000551297.6

TMEM116-214, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-214ENST00000551297 KRTAP19-4Q3LI73 84 aa3.03□□□□□ -1.92
TMEM116-214ENST00000551297 KRTAP12-3P60328 96 aa3.02□□□□□ -1.93
TMEM116-214ENST00000551297 KRTAP19-6Q3LI70 58 aa3.02□□□□□ -1.93
TMEM116-214ENST00000551297 SPRR5A0A1B0GTR4 108 aa2.97□□□□□ -1.93
TMEM116-214ENST00000551297 NDUFAF8A1L188 74 aa2.93□□□□□ -1.94
TMEM116-214ENST00000551297 USH2AO75445 5202 aa2.91□□□□□ -1.94
TMEM116-214ENST00000551297 KRTAP19-5Q3LI72 72 aa2.91□□□□□ -1.94
TMEM116-214ENST00000551297 FSIP2Q5CZC0 6907 aa2.89□□□□□ -1.95
TMEM116-214ENST00000551297 SSPOA2VEC9 5147 aa2.87□□□□□ -1.95
TMEM116-214ENST00000551297 KRTAP19-7Q3SYF9 63 aa2.83□□□□□ -1.96
TMEM116-214ENST00000551297 LCE3CQ5T5A8 94 aa2.82□□□□□ -1.96
TMEM116-214ENST00000551297 MT1EP04732 61 aa2.81□□□□□ -1.96
TMEM116-214ENST00000551297 CRCT1Q9UGL9 99 aa2.81□□□□□ -1.96
TMEM116-214ENST00000551297 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.8□□□□□ -1.96
TMEM116-214ENST00000551297 MT1LQ93083 61 aa2.78□□□□□ -1.96
TMEM116-214ENST00000551297 KRTAP19-3Q7Z4W3 81 aa2.71□□□□□ -1.98
TMEM116-214ENST00000551297 MT1GP13640 62 aa2.7□□□□□ -1.98
TMEM116-214ENST00000551297 FCGBPQ9Y6R7 5405 aaPredicted RBP2.69□□□□□ -1.98
TMEM116-214ENST00000551297 SPRR2FQ96RM1 72 aa2.68□□□□□ -1.98
TMEM116-214ENST00000551297 MT1MQ8N339 61 aa2.64□□□□□ -1.99
TMEM116-214ENST00000551297 KMT2DO14686 5537 aa2.63□□□□□ -1.99
TMEM116-214ENST00000551297 KRTAP5-9P26371 169 aa2.63□□□□□ -1.99
TMEM116-214ENST00000551297 KRTAP9-6A8MVA2 160 aa2.56□□□□□ -2
TMEM116-214ENST00000551297 INE1O15225 51 aa2.55□□□□□ -2
TMEM116-214ENST00000551297 LCE1AQ5T7P2 110 aa2.55□□□□□ -2
TMEM116-214ENST00000551297 KRTAP6-3Q3LI67 103 aa2.54□□□□□ -2
TMEM116-214ENST00000551297 SYNE2Q8WXH0 6885 aaKnown RBP2.53□□□□□ -2
TMEM116-214ENST00000551297 SPRR2EP22531 72 aa2.52□□□□□ -2.01
TMEM116-214ENST00000551297 SPRR2BP35325 72 aa2.52□□□□□ -2.01
TMEM116-214ENST00000551297 SPRR2AP35326 72 aa2.52□□□□□ -2.01
TMEM116-214ENST00000551297 KRTAP2-3P0C7H8 128 aa2.51□□□□□ -2.01
TMEM116-214ENST00000551297 KRTAP2-4Q9BYR9 128 aa2.51□□□□□ -2.01
TMEM116-214ENST00000551297 KRTAP2-1Q9BYU5 128 aa2.51□□□□□ -2.01
TMEM116-214ENST00000551297 MACF1Q9UPN3 7388 aaKnown RBP2.48□□□□□ -2.01
TMEM116-214ENST00000551297 KRTAP4-3Q9BYR4 195 aa2.47□□□□□ -2.01
TMEM116-214ENST00000551297 MUC12Q9UKN1 5478 aa2.45□□□□□ -2.02
TMEM116-214ENST00000551297 SPRR2DP22532 72 aa2.44□□□□□ -2.02
TMEM116-214ENST00000551297 KRTAP5-11Q6L8G4 156 aa2.44□□□□□ -2.02
TMEM116-214ENST00000551297 NEBP20929 6669 aa2.41□□□□□ -2.02
TMEM116-214ENST00000551297 MT1AP04731 61 aa2.39□□□□□ -2.03
TMEM116-214ENST00000551297 KRTAP5-4Q6L8H1 288 aa2.38□□□□□ -2.03
TMEM116-214ENST00000551297 KRTAP5-5Q701N2 237 aaPredicted RBP2.35□□□□□ -2.03
TMEM116-214ENST00000551297 KRTAP20-1Q3LI63 56 aa2.33□□□□□ -2.04
TMEM116-214ENST00000551297 KRTAP5-1Q6L8H4 278 aa2.33□□□□□ -2.04
TMEM116-214ENST00000551297 MDN1Q9NU22 5596 aa2.33□□□□□ -2.04
TMEM116-214ENST00000551297 KRTAP6-1Q3LI64 71 aa2.29□□□□□ -2.04
TMEM116-214ENST00000551297 KRTAP4-4Q9BYR3 166 aa2.26□□□□□ -2.05
TMEM116-214ENST00000551297 GPR98Q8WXG9 6306 aa2.26□□□□□ -2.05
TMEM116-214ENST00000551297 KRTAP12-4P60329 112 aa2.24□□□□□ -2.05
TMEM116-214ENST00000551297 MT3P25713 68 aa2.18□□□□□ -2.06
TMEM116-214ENST00000551297 LCE1EQ5T753 118 aa2.17□□□□□ -2.06
TMEM116-214ENST00000551297 LCE3DQ9BYE3 92 aa2.16□□□□□ -2.06
TMEM116-214ENST00000551297 KRTAP2-2Q9BYT5 123 aa2.16□□□□□ -2.06
TMEM116-214ENST00000551297 DSTQ03001 7570 aaKnown RBP2.16□□□□□ -2.06
TMEM116-214ENST00000551297 LCE3EQ5T5B0 92 aa2.12□□□□□ -2.07
TMEM116-214ENST00000551297 KRTAP6-2Q3LI66 62 aa2.1□□□□□ -2.07
TMEM116-214ENST00000551297 SYNE1Q8NF91 8797 aaKnown RBP2.09□□□□□ -2.08
TMEM116-214ENST00000551297 KRTAP20-2Q3LI61 65 aa2.06□□□□□ -2.08
TMEM116-214ENST00000551297 MT4P47944 62 aa2.05□□□□□ -2.08
TMEM116-214ENST00000551297 KRTAP5-2Q701N4 177 aa2.04□□□□□ -2.08
TMEM116-214ENST00000551297 OBSCNQ5VST9 7968 aa2.01□□□□□ -2.09
TMEM116-214ENST00000551297 AHNAK2Q8IVF2 5795 aa1.94□□□□□ -2.1
TMEM116-214ENST00000551297 HMCN1Q96RW7 5635 aa1.93□□□□□ -2.1
TMEM116-214ENST00000551297 PRM1P04553 51 aa1.86□□□□□ -2.11
TMEM116-214ENST00000551297 KRTAP5-10Q6L8G5 202 aa1.84□□□□□ -2.11
TMEM116-214ENST00000551297 KRTAP5-8O75690 187 aa1.83□□□□□ -2.12
TMEM116-214ENST00000551297 LCE1FQ5T754 118 aa1.82□□□□□ -2.12
TMEM116-214ENST00000551297 KRTAP5-7Q6L8G8 165 aa1.8□□□□□ -2.12
TMEM116-214ENST00000551297 AHNAKQ09666 5890 aaKnown RBP1.75□□□□□ -2.13
TMEM116-214ENST00000551297 LCE1CQ5T751 118 aa1.73□□□□□ -2.13
TMEM116-214ENST00000551297 LCE1BQ5T7P3 118 aa1.73□□□□□ -2.13
TMEM116-214ENST00000551297 MUC5ACP98088 5654 aa1.66□□□□□ -2.14
TMEM116-214ENST00000551297 MUC5BQ9HC84 5762 aaPredicted RBP1.64□□□□□ -2.15
TMEM116-214ENST00000551297 KRTAP21-2Q3LI59 83 aa1.49□□□□□ -2.17
TMEM116-214ENST00000551297 PHGR1C9JFL3 82 aa1.28□□□□□ -2.2
TMEM116-214ENST00000551297 MUC19Q7Z5P9 8384 aa1.18□□□□□ -2.22
TMEM116-214ENST00000551297 KRTAP21-1Q3LI58 79 aa1.17□□□□□ -2.22
TMEM116-214ENST00000551297 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 104.5 ms