RNA–Protein interactions for RNA: ENST00000551179.1

CNOT2-229, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 355 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-229ENST00000551179 MT1BP07438 61 aa4.2□□□□□ -1.74
CNOT2-229ENST00000551179 LUZP6Q538Z0 58 aa4.17□□□□□ -1.74
CNOT2-229ENST00000551179 KRTAP5-1Q6L8H4 278 aa4.17□□□□□ -1.74
CNOT2-229ENST00000551179 KRTAP10-12P60413 245 aa4.13□□□□□ -1.75
CNOT2-229ENST00000551179 MT1XP80297 61 aa4.13□□□□□ -1.75
CNOT2-229ENST00000551179 KRTAP10-5P60370 271 aa4.12□□□□□ -1.75
CNOT2-229ENST00000551179 LCE3AQ5TA76 89 aa4.12□□□□□ -1.75
CNOT2-229ENST00000551179 KRTAP5-4Q6L8H1 288 aa4.11□□□□□ -1.75
CNOT2-229ENST00000551179 NDUFAF8A1L188 74 aa4.09□□□□□ -1.75
CNOT2-229ENST00000551179 KRTAP4-4Q9BYR3 166 aa4.08□□□□□ -1.76
CNOT2-229ENST00000551179 KRTAP8-1Q8IUC2 63 aa4.04□□□□□ -1.76
CNOT2-229ENST00000551179 KRTAP12-3P60328 96 aa3.98□□□□□ -1.77
CNOT2-229ENST00000551179 LCE1EQ5T753 118 aa3.97□□□□□ -1.77
CNOT2-229ENST00000551179 SPRR5A0A1B0GTR4 108 aa3.92□□□□□ -1.78
CNOT2-229ENST00000551179 LCE1FQ5T754 118 aa3.85□□□□□ -1.79
CNOT2-229ENST00000551179 KRTAP19-5Q3LI72 72 aa3.82□□□□□ -1.8
CNOT2-229ENST00000551179 KRTAP19-6Q3LI70 58 aa3.8□□□□□ -1.8
CNOT2-229ENST00000551179 LCE3CQ5T5A8 94 aa3.71□□□□□ -1.82
CNOT2-229ENST00000551179 USH2AO75445 5202 aa3.7□□□□□ -1.82
CNOT2-229ENST00000551179 KRTAP19-7Q3SYF9 63 aa3.66□□□□□ -1.82
CNOT2-229ENST00000551179 MT1EP04732 61 aa3.63□□□□□ -1.83
CNOT2-229ENST00000551179 SSPOA2VEC9 5147 aa3.62□□□□□ -1.83
CNOT2-229ENST00000551179 MT1LQ93083 61 aa3.6□□□□□ -1.83
CNOT2-229ENST00000551179 KRTAP5-2Q701N4 177 aa3.58□□□□□ -1.84
CNOT2-229ENST00000551179 KRTAP9-6A8MVA2 160 aa3.57□□□□□ -1.84
CNOT2-229ENST00000551179 OBSCNQ5VST9 7968 aa3.51□□□□□ -1.85
CNOT2-229ENST00000551179 KRTAP19-3Q7Z4W3 81 aa3.48□□□□□ -1.85
CNOT2-229ENST00000551179 KRTAP4-3Q9BYR4 195 aa3.48□□□□□ -1.85
CNOT2-229ENST00000551179 MT1GP13640 62 aa3.47□□□□□ -1.85
CNOT2-229ENST00000551179 INE1O15225 51 aa3.46□□□□□ -1.86
CNOT2-229ENST00000551179 SPRR2FQ96RM1 72 aa3.45□□□□□ -1.86
CNOT2-229ENST00000551179 KMT2DO14686 5537 aa3.43□□□□□ -1.86
CNOT2-229ENST00000551179 MT1MQ8N339 61 aa3.41□□□□□ -1.86
CNOT2-229ENST00000551179 FSIP2Q5CZC0 6907 aa3.4□□□□□ -1.87
CNOT2-229ENST00000551179 CRCT1Q9UGL9 99 aa3.4□□□□□ -1.87
CNOT2-229ENST00000551179 FCGBPQ9Y6R7 5405 aaPredicted RBP3.39□□□□□ -1.87
CNOT2-229ENST00000551179 LCE3EQ5T5B0 92 aa3.31□□□□□ -1.88
CNOT2-229ENST00000551179 KRTAP2-3P0C7H8 128 aa3.3□□□□□ -1.88
CNOT2-229ENST00000551179 KRTAP2-4Q9BYR9 128 aa3.3□□□□□ -1.88
CNOT2-229ENST00000551179 KRTAP2-1Q9BYU5 128 aa3.3□□□□□ -1.88
CNOT2-229ENST00000551179 SPRR2EP22531 72 aa3.24□□□□□ -1.89
CNOT2-229ENST00000551179 SPRR2BP35325 72 aa3.24□□□□□ -1.89
CNOT2-229ENST00000551179 SPRR2AP35326 72 aa3.24□□□□□ -1.89
CNOT2-229ENST00000551179 MACF1Q9UPN3 7388 aaKnown RBP3.18□□□□□ -1.9
CNOT2-229ENST00000551179 KRTAP6-3Q3LI67 103 aa3.15□□□□□ -1.91
CNOT2-229ENST00000551179 SPRR2DP22532 72 aa3.13□□□□□ -1.91
CNOT2-229ENST00000551179 MUC12Q9UKN1 5478 aa3.13□□□□□ -1.91
CNOT2-229ENST00000551179 MT1AP04731 61 aa3.09□□□□□ -1.91
CNOT2-229ENST00000551179 SYNE2Q8WXH0 6885 aaKnown RBP3.05□□□□□ -1.92
CNOT2-229ENST00000551179 KRTAP5-8O75690 187 aa3.02□□□□□ -1.93
CNOT2-229ENST00000551179 MDN1Q9NU22 5596 aa3.01□□□□□ -1.93
CNOT2-229ENST00000551179 KRTAP6-1Q3LI64 71 aa2.99□□□□□ -1.93
CNOT2-229ENST00000551179 KRTAP5-5Q701N2 237 aaPredicted RBP2.99□□□□□ -1.93
CNOT2-229ENST00000551179 KRTAP12-4P60329 112 aa2.9□□□□□ -1.95
CNOT2-229ENST00000551179 LCE3DQ9BYE3 92 aa2.86□□□□□ -1.95
CNOT2-229ENST00000551179 DSTQ03001 7570 aaKnown RBP2.85□□□□□ -1.95
CNOT2-229ENST00000551179 NEBP20929 6669 aa2.85□□□□□ -1.95
CNOT2-229ENST00000551179 KRTAP6-2Q3LI66 62 aa2.74□□□□□ -1.97
CNOT2-229ENST00000551179 SYNE1Q8NF91 8797 aaKnown RBP2.71□□□□□ -1.97
CNOT2-229ENST00000551179 MT4P47944 62 aa2.66□□□□□ -1.98
CNOT2-229ENST00000551179 KRTAP20-1Q3LI63 56 aa2.64□□□□□ -1.99
CNOT2-229ENST00000551179 LCE1CQ5T751 118 aa2.63□□□□□ -1.99
CNOT2-229ENST00000551179 LCE1BQ5T7P3 118 aa2.63□□□□□ -1.99
CNOT2-229ENST00000551179 KRTAP20-2Q3LI61 65 aa2.61□□□□□ -1.99
CNOT2-229ENST00000551179 PRM1P04553 51 aa2.54□□□□□ -2
CNOT2-229ENST00000551179 HMCN1Q96RW7 5635 aa2.43□□□□□ -2.02
CNOT2-229ENST00000551179 AHNAK2Q8IVF2 5795 aa2.2□□□□□ -2.06
CNOT2-229ENST00000551179 KRTAP5-10Q6L8G5 202 aa2.17□□□□□ -2.06
CNOT2-229ENST00000551179 MUC19Q7Z5P9 8384 aa2.16□□□□□ -2.06
CNOT2-229ENST00000551179 KRTAP5-7Q6L8G8 165 aa2.16□□□□□ -2.06
CNOT2-229ENST00000551179 MUC5ACP98088 5654 aa2.12□□□□□ -2.07
CNOT2-229ENST00000551179 GPR98Q8WXG9 6306 aa1.94□□□□□ -2.1
CNOT2-229ENST00000551179 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
CNOT2-229ENST00000551179 MUC5BQ9HC84 5762 aaPredicted RBP1.78□□□□□ -2.12
CNOT2-229ENST00000551179 AHNAKQ09666 5890 aaKnown RBP1.68□□□□□ -2.14
CNOT2-229ENST00000551179 PHGR1C9JFL3 82 aa1.61□□□□□ -2.15
CNOT2-229ENST00000551179 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
CNOT2-229ENST00000551179 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 246.6 ms