RNA–Protein interactions for RNA: ENST00000550979.1

HIGD1AP1-201, Transcript of HIG1 hypoxia inducible domain family member 1A pseudogene 1, humanhuman

BASIC

Gene HIGD1AP1, Length 275 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1AP1-201ENST00000550979 Q5VV11 94 aa1.48□□□□□ -2.17
HIGD1AP1-201ENST00000550979 SPRR2GQ9BYE4 73 aa1.48□□□□□ -2.17
HIGD1AP1-201ENST00000550979 CYSTM1Q9H1C7 97 aa1.48□□□□□ -2.17
HIGD1AP1-201ENST00000550979 FSIP2Q5CZC0 6907 aa1.48□□□□□ -2.17
HIGD1AP1-201ENST00000550979 M0QZ58 72 aa1.47□□□□□ -2.17
HIGD1AP1-201ENST00000550979 PLAC4Q8WY50 150 aa1.46□□□□□ -2.18
HIGD1AP1-201ENST00000550979 KRTAP19-8Q3LI54 63 aa1.45□□□□□ -2.18
HIGD1AP1-201ENST00000550979 A0A1B0GU69 56 aa1.44□□□□□ -2.18
HIGD1AP1-201ENST00000550979 PRR15LQ9BU68 103 aa1.44□□□□□ -2.18
HIGD1AP1-201ENST00000550979 MT1BP07438 61 aa1.43□□□□□ -2.18
HIGD1AP1-201ENST00000550979 KRTAP19-6Q3LI70 58 aa1.43□□□□□ -2.18
HIGD1AP1-201ENST00000550979 LCE3DQ9BYE3 92 aa1.42□□□□□ -2.18
HIGD1AP1-201ENST00000550979 USH2AO75445 5202 aa1.41□□□□□ -2.18
HIGD1AP1-201ENST00000550979 KRTAP13-4Q3LI77 160 aa1.41□□□□□ -2.18
HIGD1AP1-201ENST00000550979 SSPOA2VEC9 5147 aa1.41□□□□□ -2.18
HIGD1AP1-201ENST00000550979 FCGBPQ9Y6R7 5405 aaPredicted RBP1.41□□□□□ -2.18
HIGD1AP1-201ENST00000550979 A0A0D9SG42 100 aa1.4□□□□□ -2.19
HIGD1AP1-201ENST00000550979 LINC01558Q9Y6Z2 57 aa1.4□□□□□ -2.19
HIGD1AP1-201ENST00000550979 INE1O15225 51 aa1.39□□□□□ -2.19
HIGD1AP1-201ENST00000550979 SPATA8Q6RVD6 105 aa1.39□□□□□ -2.19
HIGD1AP1-201ENST00000550979 MACF1Q9UPN3 7388 aaKnown RBP1.39□□□□□ -2.19
HIGD1AP1-201ENST00000550979 UQCR11O14957 56 aa1.38□□□□□ -2.19
HIGD1AP1-201ENST00000550979 KRTAP12-1P59990 96 aa1.36□□□□□ -2.19
HIGD1AP1-201ENST00000550979 MT1XP80297 61 aa1.36□□□□□ -2.19
HIGD1AP1-201ENST00000550979 HMCN1Q96RW7 5635 aa1.36□□□□□ -2.19
HIGD1AP1-201ENST00000550979 KRTAP6-3Q3LI67 103 aa1.34□□□□□ -2.19
HIGD1AP1-201ENST00000550979 LCE3AQ5TA76 89 aa1.34□□□□□ -2.19
HIGD1AP1-201ENST00000550979 PP632Q6XCG6 107 aa1.32□□□□□ -2.2
HIGD1AP1-201ENST00000550979 KRTAP8-1Q8IUC2 63 aa1.31□□□□□ -2.2
HIGD1AP1-201ENST00000550979 SYNE2Q8WXH0 6885 aaKnown RBP1.31□□□□□ -2.2
HIGD1AP1-201ENST00000550979 TNP1P09430 55 aa1.3□□□□□ -2.2
HIGD1AP1-201ENST00000550979 SPRR2FQ96RM1 72 aa1.28□□□□□ -2.2
HIGD1AP1-201ENST00000550979 C10orf95Q9H7T3 257 aa1.27□□□□□ -2.21
HIGD1AP1-201ENST00000550979 SPRR2EP22531 72 aa1.25□□□□□ -2.21
HIGD1AP1-201ENST00000550979 SPRR2BP35325 72 aa1.25□□□□□ -2.21
HIGD1AP1-201ENST00000550979 SPRR2AP35326 72 aa1.25□□□□□ -2.21
HIGD1AP1-201ENST00000550979 MDN1Q9NU22 5596 aa1.23□□□□□ -2.21
HIGD1AP1-201ENST00000550979 NEBP20929 6669 aa1.23□□□□□ -2.21
HIGD1AP1-201ENST00000550979 KMT2DO14686 5537 aa1.23□□□□□ -2.21
HIGD1AP1-201ENST00000550979 KRTAP12-3P60328 96 aa1.22□□□□□ -2.21
HIGD1AP1-201ENST00000550979 KRTAP20-1Q3LI63 56 aa1.22□□□□□ -2.21
HIGD1AP1-201ENST00000550979 SPRR2DP22532 72 aa1.21□□□□□ -2.22
HIGD1AP1-201ENST00000550979 KRTAP19-5Q3LI72 72 aa1.21□□□□□ -2.22
HIGD1AP1-201ENST00000550979 DSTQ03001 7570 aaKnown RBP1.2□□□□□ -2.22
HIGD1AP1-201ENST00000550979 MT1EP04732 61 aa1.2□□□□□ -2.22
HIGD1AP1-201ENST00000550979 KRTAP2-3P0C7H8 128 aa1.2□□□□□ -2.22
HIGD1AP1-201ENST00000550979 KRTAP19-7Q3SYF9 63 aa1.2□□□□□ -2.22
HIGD1AP1-201ENST00000550979 LCE1CQ5T751 118 aa1.2□□□□□ -2.22
HIGD1AP1-201ENST00000550979 LCE1BQ5T7P3 118 aa1.2□□□□□ -2.22
HIGD1AP1-201ENST00000550979 KRTAP2-4Q9BYR9 128 aa1.2□□□□□ -2.22
HIGD1AP1-201ENST00000550979 MUC12Q9UKN1 5478 aa1.2□□□□□ -2.22
HIGD1AP1-201ENST00000550979 MT1GP13640 62 aa1.19□□□□□ -2.22
HIGD1AP1-201ENST00000550979 KRTAP19-3Q7Z4W3 81 aa1.18□□□□□ -2.22
HIGD1AP1-201ENST00000550979 KRTAP12-4P60329 112 aa1.17□□□□□ -2.22
HIGD1AP1-201ENST00000550979 KRTAP5-5Q701N2 237 aaPredicted RBP1.17□□□□□ -2.22
HIGD1AP1-201ENST00000550979 MT1LQ93083 61 aa1.16□□□□□ -2.22
HIGD1AP1-201ENST00000550979 KRTAP2-1Q9BYU5 128 aa1.15□□□□□ -2.23
HIGD1AP1-201ENST00000550979 MT1MQ8N339 61 aa1.14□□□□□ -2.23
HIGD1AP1-201ENST00000550979 GPR98Q8WXG9 6306 aa1.12□□□□□ -2.23
HIGD1AP1-201ENST00000550979 MUC19Q7Z5P9 8384 aa1.06□□□□□ -2.24
HIGD1AP1-201ENST00000550979 MT4P47944 62 aa1.04□□□□□ -2.24
HIGD1AP1-201ENST00000550979 MT1AP04731 61 aa1□□□□□ -2.25
HIGD1AP1-201ENST00000550979 SYNE1Q8NF91 8797 aaKnown RBP1□□□□□ -2.25
HIGD1AP1-201ENST00000550979 AHNAK2Q8IVF2 5795 aa0.98□□□□□ -2.25
HIGD1AP1-201ENST00000550979 KRTAP20-2Q3LI61 65 aa0.98□□□□□ -2.25
HIGD1AP1-201ENST00000550979 KRTAP6-1Q3LI64 71 aa0.98□□□□□ -2.25
HIGD1AP1-201ENST00000550979 KRTAP5-10Q6L8G5 202 aa0.98□□□□□ -2.25
HIGD1AP1-201ENST00000550979 KRTAP5-7Q6L8G8 165 aa0.98□□□□□ -2.25
HIGD1AP1-201ENST00000550979 KRTAP6-2Q3LI66 62 aa0.93□□□□□ -2.26
HIGD1AP1-201ENST00000550979 KRTAP21-2Q3LI59 83 aa0.89□□□□□ -2.27
HIGD1AP1-201ENST00000550979 AHNAKQ09666 5890 aaKnown RBP0.86□□□□□ -2.27
HIGD1AP1-201ENST00000550979 MUC5BQ9HC84 5762 aaPredicted RBP0.83□□□□□ -2.28
HIGD1AP1-201ENST00000550979 MUC5ACP98088 5654 aa0.81□□□□□ -2.28
HIGD1AP1-201ENST00000550979 PRM1P04553 51 aa0.62□□□□□ -2.31
HIGD1AP1-201ENST00000550979 PHGR1C9JFL3 82 aa0.59□□□□□ -2.31
HIGD1AP1-201ENST00000550979 KRTAP21-1Q3LI58 79 aa0.46□□□□□ -2.34
HIGD1AP1-201ENST00000550979 MUC16Q8WXI7 14507 aa0.42□□□□□ -2.34
Retrieved 77 of 20,778 RNA–protein pairs in 63 ms