RNA–Protein interactions for RNA: ENST00000550844.2

ATXN2-221, Transcript of ataxin 2, humanhuman

TSL 2

Gene ATXN2, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-221ENST00000550844 KRTAP19-5Q3LI72 72 aa3.44□□□□□ -1.86
ATXN2-221ENST00000550844 SPRR2FQ96RM1 72 aa3.43□□□□□ -1.86
ATXN2-221ENST00000550844 LCE4AQ5TA78 99 aa3.39□□□□□ -1.87
ATXN2-221ENST00000550844 KRTAP19-7Q3SYF9 63 aa3.37□□□□□ -1.87
ATXN2-221ENST00000550844 KRTAP12-3P60328 96 aa3.36□□□□□ -1.87
ATXN2-221ENST00000550844 KRTAP9-7A8MTY7 169 aa3.33□□□□□ -1.88
ATXN2-221ENST00000550844 KRTAP4-7Q9BYR0 210 aa3.32□□□□□ -1.88
ATXN2-221ENST00000550844 KRTAP9-4Q9BYQ2 154 aa3.3□□□□□ -1.88
ATXN2-221ENST00000550844 MT1EP04732 61 aa3.29□□□□□ -1.88
ATXN2-221ENST00000550844 KRTAP4-3Q9BYR4 195 aa3.25□□□□□ -1.89
ATXN2-221ENST00000550844 KRTAP9-9Q9BYP9 154 aa3.24□□□□□ -1.89
ATXN2-221ENST00000550844 SPRR2EP22531 72 aa3.24□□□□□ -1.89
ATXN2-221ENST00000550844 SPRR2BP35325 72 aa3.24□□□□□ -1.89
ATXN2-221ENST00000550844 SPRR2AP35326 72 aa3.24□□□□□ -1.89
ATXN2-221ENST00000550844 KRTAP6-3Q3LI67 103 aa3.23□□□□□ -1.89
ATXN2-221ENST00000550844 KRTAP5-9P26371 169 aa3.22□□□□□ -1.89
ATXN2-221ENST00000550844 NEBP20929 6669 aa3.22□□□□□ -1.89
ATXN2-221ENST00000550844 MT1LQ93083 61 aa3.22□□□□□ -1.89
ATXN2-221ENST00000550844 LCE1AQ5T7P2 110 aa3.2□□□□□ -1.9
ATXN2-221ENST00000550844 LCE5AQ5TCM9 118 aa3.19□□□□□ -1.9
ATXN2-221ENST00000550844 KRTAP19-3Q7Z4W3 81 aa3.17□□□□□ -1.9
ATXN2-221ENST00000550844 SYNE1Q8NF91 8797 aaKnown RBP3.17□□□□□ -1.9
ATXN2-221ENST00000550844 LCE3CQ5T5A8 94 aa3.15□□□□□ -1.91
ATXN2-221ENST00000550844 MT1MQ8N339 61 aa3.12□□□□□ -1.91
ATXN2-221ENST00000550844 LOC100996750A0A140TA64 210 aa3.11□□□□□ -1.91
ATXN2-221ENST00000550844 MT1GP13640 62 aa3.1□□□□□ -1.91
ATXN2-221ENST00000550844 OBSCNQ5VST9 7968 aa3.1□□□□□ -1.91
ATXN2-221ENST00000550844 SPRR2DP22532 72 aa3.1□□□□□ -1.91
ATXN2-221ENST00000550844 KRTAP19-4Q3LI73 84 aa3.08□□□□□ -1.92
ATXN2-221ENST00000550844 KRTAP9-6A8MVA2 160 aa3.06□□□□□ -1.92
ATXN2-221ENST00000550844 KRTAP2-3P0C7H8 128 aa3.04□□□□□ -1.92
ATXN2-221ENST00000550844 KRTAP2-4Q9BYR9 128 aa3.04□□□□□ -1.92
ATXN2-221ENST00000550844 KRTAP2-1Q9BYU5 128 aa3.04□□□□□ -1.92
ATXN2-221ENST00000550844 LCE3BQ5TA77 95 aa2.98□□□□□ -1.93
ATXN2-221ENST00000550844 LCE1FQ5T754 118 aa2.93□□□□□ -1.94
ATXN2-221ENST00000550844 KRTAP20-1Q3LI63 56 aa2.89□□□□□ -1.95
ATXN2-221ENST00000550844 KRTAP4-9Q9BYQ8 210 aa2.87□□□□□ -1.95
ATXN2-221ENST00000550844 KRTAP2-2Q9BYT5 123 aa2.84□□□□□ -1.96
ATXN2-221ENST00000550844 MT4P47944 62 aa2.83□□□□□ -1.96
ATXN2-221ENST00000550844 HMCN1Q96RW7 5635 aa2.8□□□□□ -1.96
ATXN2-221ENST00000550844 KRTAP12-4P60329 112 aa2.79□□□□□ -1.96
ATXN2-221ENST00000550844 KRTAP6-1Q3LI64 71 aa2.78□□□□□ -1.96
ATXN2-221ENST00000550844 KRTAP4-12Q9BQ66 201 aa2.76□□□□□ -1.97
ATXN2-221ENST00000550844 KRTAP4-6Q9BYQ5 205 aa2.76□□□□□ -1.97
ATXN2-221ENST00000550844 KRTAP5-5Q701N2 237 aaPredicted RBP2.74□□□□□ -1.97
ATXN2-221ENST00000550844 LCE1DQ5T752 114 aa2.7□□□□□ -1.98
ATXN2-221ENST00000550844 MT1AP04731 61 aa2.67□□□□□ -1.98
ATXN2-221ENST00000550844 LCE1EQ5T753 118 aa2.66□□□□□ -1.98
ATXN2-221ENST00000550844 LCE3EQ5T5B0 92 aa2.65□□□□□ -1.98
ATXN2-221ENST00000550844 KRTAP5-4Q6L8H1 288 aa2.64□□□□□ -1.99
ATXN2-221ENST00000550844 KRTAP6-2Q3LI66 62 aa2.59□□□□□ -1.99
ATXN2-221ENST00000550844 KRTAP20-2Q3LI61 65 aa2.57□□□□□ -2
ATXN2-221ENST00000550844 PRM1P04553 51 aa2.51□□□□□ -2.01
ATXN2-221ENST00000550844 AHNAK2Q8IVF2 5795 aa2.46□□□□□ -2.02
ATXN2-221ENST00000550844 LCE3DQ9BYE3 92 aa2.46□□□□□ -2.02
ATXN2-221ENST00000550844 MT3P25713 68 aa2.44□□□□□ -2.02
ATXN2-221ENST00000550844 KRTAP5-3Q6L8H2 238 aa2.43□□□□□ -2.02
ATXN2-221ENST00000550844 GPR98Q8WXG9 6306 aa2.4□□□□□ -2.02
ATXN2-221ENST00000550844 KRTAP5-2Q701N4 177 aa2.36□□□□□ -2.03
ATXN2-221ENST00000550844 MUC5ACP98088 5654 aa2.34□□□□□ -2.04
ATXN2-221ENST00000550844 KRTAP4-11Q9BYQ6 195 aa2.28□□□□□ -2.04
ATXN2-221ENST00000550844 KRTAP5-10Q6L8G5 202 aa2.22□□□□□ -2.05
ATXN2-221ENST00000550844 MUC5BQ9HC84 5762 aaPredicted RBP2.2□□□□□ -2.06
ATXN2-221ENST00000550844 LCE1BQ5T7P3 118 aa2.2□□□□□ -2.06
ATXN2-221ENST00000550844 KRTAP5-8O75690 187 aa2.16□□□□□ -2.06
ATXN2-221ENST00000550844 KRTAP5-1Q6L8H4 278 aa2.13□□□□□ -2.07
ATXN2-221ENST00000550844 KRTAP4-2Q9BYR5 136 aa2.12□□□□□ -2.07
ATXN2-221ENST00000550844 MUC19Q7Z5P9 8384 aa2.04□□□□□ -2.08
ATXN2-221ENST00000550844 KRTAP5-7Q6L8G8 165 aa2□□□□□ -2.09
ATXN2-221ENST00000550844 LCE1CQ5T751 118 aa1.94□□□□□ -2.1
ATXN2-221ENST00000550844 AHNAKQ09666 5890 aaKnown RBP1.89□□□□□ -2.11
ATXN2-221ENST00000550844 KRTAP4-4Q9BYR3 166 aa1.8□□□□□ -2.12
ATXN2-221ENST00000550844 KRTAP21-2Q3LI59 83 aa1.77□□□□□ -2.13
ATXN2-221ENST00000550844 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.73□□□□□ -2.13
ATXN2-221ENST00000550844 KRTAP5-11Q6L8G4 156 aa1.71□□□□□ -2.14
ATXN2-221ENST00000550844 KRTAP21-1Q3LI58 79 aa1.57□□□□□ -2.16
ATXN2-221ENST00000550844 PHGR1C9JFL3 82 aa1.5□□□□□ -2.17
ATXN2-221ENST00000550844 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 168.1 ms