RNA–Protein interactions for RNA: ENST00000550811.1

TUBA1A-208, Transcript of tubulin alpha 1a, humanhuman

TSL 4

Gene TUBA1A, Length 650 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-208ENST00000550811 SPINT4Q6UDR6 99 aa4.01□□□□□ -1.77
TUBA1A-208ENST00000550811 KRTAP10-5P60370 271 aa4□□□□□ -1.77
TUBA1A-208ENST00000550811 KRTAP12-2P59991 146 aa3.99□□□□□ -1.77
TUBA1A-208ENST00000550811 PRO2289Q9P1D8 64 aa3.99□□□□□ -1.77
TUBA1A-208ENST00000550811 FCGBPQ9Y6R7 5405 aaPredicted RBP3.99□□□□□ -1.77
TUBA1A-208ENST00000550811 MT1XP80297 61 aa3.97□□□□□ -1.77
TUBA1A-208ENST00000550811 PMAIP1Q13794 54 aa3.94□□□□□ -1.78
TUBA1A-208ENST00000550811 LCE1EQ5T753 118 aa3.93□□□□□ -1.78
TUBA1A-208ENST00000550811 KRTAP10-12P60413 245 aa3.92□□□□□ -1.78
TUBA1A-208ENST00000550811 CDC42SE1Q9NRR8 79 aa3.92□□□□□ -1.78
TUBA1A-208ENST00000550811 MACF1Q9UPN3 7388 aaKnown RBP3.85□□□□□ -1.79
TUBA1A-208ENST00000550811 BRK1Q8WUW1 75 aa3.82□□□□□ -1.8
TUBA1A-208ENST00000550811 C10orf95Q9H7T3 257 aa3.8□□□□□ -1.8
TUBA1A-208ENST00000550811 KMT2DO14686 5537 aa3.76□□□□□ -1.81
TUBA1A-208ENST00000550811 LCE3CQ5T5A8 94 aa3.76□□□□□ -1.81
TUBA1A-208ENST00000550811 TNP1P09430 55 aa3.75□□□□□ -1.81
TUBA1A-208ENST00000550811 SYNE2Q8WXH0 6885 aaKnown RBP3.73□□□□□ -1.81
TUBA1A-208ENST00000550811 ROMO1P60602 79 aa3.7□□□□□ -1.82
TUBA1A-208ENST00000550811 KRTAP25-1Q3LHN0 102 aa3.69□□□□□ -1.82
TUBA1A-208ENST00000550811 KRTAP8-1Q8IUC2 63 aa3.68□□□□□ -1.82
TUBA1A-208ENST00000550811 KRTAP6-3Q3LI67 103 aa3.65□□□□□ -1.83
TUBA1A-208ENST00000550811 LCE3AQ5TA76 89 aa3.62□□□□□ -1.83
TUBA1A-208ENST00000550811 MUC12Q9UKN1 5478 aa3.6□□□□□ -1.83
TUBA1A-208ENST00000550811 SPRR2FQ96RM1 72 aa3.59□□□□□ -1.83
TUBA1A-208ENST00000550811 OBSCNQ5VST9 7968 aa3.58□□□□□ -1.84
TUBA1A-208ENST00000550811 KRTAP19-5Q3LI72 72 aa3.54□□□□□ -1.84
TUBA1A-208ENST00000550811 KRTAP19-7Q3SYF9 63 aa3.54□□□□□ -1.84
TUBA1A-208ENST00000550811 MDN1Q9NU22 5596 aa3.52□□□□□ -1.85
TUBA1A-208ENST00000550811 PP632Q6XCG6 107 aa3.52□□□□□ -1.85
TUBA1A-208ENST00000550811 KRTAP5-2Q701N4 177 aa3.52□□□□□ -1.85
TUBA1A-208ENST00000550811 MT1EP04732 61 aa3.51□□□□□ -1.85
TUBA1A-208ENST00000550811 KTN1-AS1Q86SY8 53 aa3.51□□□□□ -1.85
TUBA1A-208ENST00000550811 NEBP20929 6669 aa3.49□□□□□ -1.85
TUBA1A-208ENST00000550811 SPRR5A0A1B0GTR4 108 aa3.48□□□□□ -1.85
TUBA1A-208ENST00000550811 KRTAP12-3P60328 96 aa3.48□□□□□ -1.85
TUBA1A-208ENST00000550811 KRTAP4-3Q9BYR4 195 aa3.48□□□□□ -1.85
TUBA1A-208ENST00000550811 SPRR2EP22531 72 aa3.47□□□□□ -1.85
TUBA1A-208ENST00000550811 SPRR2BP35325 72 aa3.47□□□□□ -1.85
TUBA1A-208ENST00000550811 SPRR2AP35326 72 aa3.47□□□□□ -1.85
TUBA1A-208ENST00000550811 LCE3EQ5T5B0 92 aa3.43□□□□□ -1.86
TUBA1A-208ENST00000550811 KRTAP19-3Q7Z4W3 81 aa3.41□□□□□ -1.86
TUBA1A-208ENST00000550811 MT1LQ93083 61 aa3.4□□□□□ -1.87
TUBA1A-208ENST00000550811 MT1GP13640 62 aa3.35□□□□□ -1.87
TUBA1A-208ENST00000550811 SPRR2DP22532 72 aa3.35□□□□□ -1.87
TUBA1A-208ENST00000550811 MT1MQ8N339 61 aa3.31□□□□□ -1.88
TUBA1A-208ENST00000550811 KRTAP9-6A8MVA2 160 aa3.27□□□□□ -1.89
TUBA1A-208ENST00000550811 KRTAP20-1Q3LI63 56 aa3.25□□□□□ -1.89
TUBA1A-208ENST00000550811 KRTAP2-3P0C7H8 128 aa3.22□□□□□ -1.89
TUBA1A-208ENST00000550811 KRTAP2-4Q9BYR9 128 aa3.22□□□□□ -1.89
TUBA1A-208ENST00000550811 DSTQ03001 7570 aaKnown RBP3.19□□□□□ -1.9
TUBA1A-208ENST00000550811 KRTAP2-1Q9BYU5 128 aa3.14□□□□□ -1.91
TUBA1A-208ENST00000550811 KRTAP5-8O75690 187 aa3.03□□□□□ -1.92
TUBA1A-208ENST00000550811 KRTAP5-5Q701N2 237 aaPredicted RBP3□□□□□ -1.93
TUBA1A-208ENST00000550811 LCE3DQ9BYE3 92 aa2.99□□□□□ -1.93
TUBA1A-208ENST00000550811 MT1AP04731 61 aa2.9□□□□□ -1.95
TUBA1A-208ENST00000550811 MT4P47944 62 aa2.9□□□□□ -1.95
TUBA1A-208ENST00000550811 HMCN1Q96RW7 5635 aa2.87□□□□□ -1.95
TUBA1A-208ENST00000550811 KRTAP12-4P60329 112 aa2.85□□□□□ -1.95
TUBA1A-208ENST00000550811 KRTAP6-1Q3LI64 71 aa2.85□□□□□ -1.95
TUBA1A-208ENST00000550811 SYNE1Q8NF91 8797 aaKnown RBP2.84□□□□□ -1.96
TUBA1A-208ENST00000550811 INE1O15225 51 aa2.8□□□□□ -1.96
TUBA1A-208ENST00000550811 KRTAP20-2Q3LI61 65 aa2.79□□□□□ -1.96
TUBA1A-208ENST00000550811 AHNAK2Q8IVF2 5795 aa2.7□□□□□ -1.98
TUBA1A-208ENST00000550811 KRTAP6-2Q3LI66 62 aa2.67□□□□□ -1.98
TUBA1A-208ENST00000550811 GPR98Q8WXG9 6306 aa2.59□□□□□ -2
TUBA1A-208ENST00000550811 KRTAP5-10Q6L8G5 202 aa2.52□□□□□ -2.01
TUBA1A-208ENST00000550811 LCE1CQ5T751 118 aa2.48□□□□□ -2.01
TUBA1A-208ENST00000550811 LCE1BQ5T7P3 118 aa2.48□□□□□ -2.01
TUBA1A-208ENST00000550811 KRTAP5-7Q6L8G8 165 aa2.38□□□□□ -2.03
TUBA1A-208ENST00000550811 MUC5ACP98088 5654 aa2.29□□□□□ -2.04
TUBA1A-208ENST00000550811 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
TUBA1A-208ENST00000550811 MUC5BQ9HC84 5762 aaPredicted RBP2.15□□□□□ -2.07
TUBA1A-208ENST00000550811 AHNAKQ09666 5890 aaKnown RBP2.12□□□□□ -2.07
TUBA1A-208ENST00000550811 PRM1P04553 51 aa1.91□□□□□ -2.1
TUBA1A-208ENST00000550811 KRTAP21-2Q3LI59 83 aa1.87□□□□□ -2.11
TUBA1A-208ENST00000550811 PHGR1C9JFL3 82 aa1.67□□□□□ -2.14
TUBA1A-208ENST00000550811 KRTAP21-1Q3LI58 79 aa1.12□□□□□ -2.23
TUBA1A-208ENST00000550811 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 138 ms