RNA–Protein interactions for RNA: ENST00000550790.1

PACS2-210, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

TSL 3

Gene PACS2, Length 1,163 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-210ENST00000550790 SMIM26A0A096LP01 95 aa7.53□□□□□ -1.2
PACS2-210ENST00000550790 MT4P47944 62 aa7.48□□□□□ -1.21
PACS2-210ENST00000550790 AHNAK2Q8IVF2 5795 aa7.46□□□□□ -1.22
PACS2-210ENST00000550790 Q1T7F1 81 aa7.44□□□□□ -1.22
PACS2-210ENST00000550790 KRTAP5-4Q6L8H1 288 aa7.43□□□□□ -1.22
PACS2-210ENST00000550790 KRTAP4-3Q9BYR4 195 aa7.42□□□□□ -1.22
PACS2-210ENST00000550790 LCE3AQ5TA76 89 aa7.4□□□□□ -1.22
PACS2-210ENST00000550790 UQCR11O14957 56 aa7.39□□□□□ -1.23
PACS2-210ENST00000550790 C10orf95Q9H7T3 257 aa7.39□□□□□ -1.23
PACS2-210ENST00000550790 V9GYY9 64 aa7.38□□□□□ -1.23
PACS2-210ENST00000550790 RPS28P62857 69 aaKnown RBP7.35□□□□□ -1.23
PACS2-210ENST00000550790 PSPHP1O15172 72 aa7.32□□□□□ -1.24
PACS2-210ENST00000550790 TNP1P09430 55 aa7.31□□□□□ -1.24
PACS2-210ENST00000550790 KRTAP4-6Q9BYQ5 205 aa7.31□□□□□ -1.24
PACS2-210ENST00000550790 MIR22HGQ0VDD5 57 aa7.26□□□□□ -1.25
PACS2-210ENST00000550790 KRTAP5-10Q6L8G5 202 aa7.25□□□□□ -1.25
PACS2-210ENST00000550790 KRTAP4-7Q9BYR0 210 aa7.18□□□□□ -1.26
PACS2-210ENST00000550790 KRTAP12-3P60328 96 aa7.11□□□□□ -1.27
PACS2-210ENST00000550790 A6NED7 52 aa7.04□□□□□ -1.28
PACS2-210ENST00000550790 KRTAP5-5Q701N2 237 aaPredicted RBP7.02□□□□□ -1.29
PACS2-210ENST00000550790 KRTAP5-7Q6L8G8 165 aa7.01□□□□□ -1.29
PACS2-210ENST00000550790 KRTAP5-3Q6L8H2 238 aa7.01□□□□□ -1.29
PACS2-210ENST00000550790 KRTAP20-2Q3LI61 65 aa6.99□□□□□ -1.29
PACS2-210ENST00000550790 SPRR5A0A1B0GTR4 108 aa6.94□□□□□ -1.3
PACS2-210ENST00000550790 K7ERS5 55 aa6.94□□□□□ -1.3
PACS2-210ENST00000550790 LOC100996750A0A140TA64 210 aa6.88□□□□□ -1.31
PACS2-210ENST00000550790 CDC42SE1Q9NRR8 79 aa6.88□□□□□ -1.31
PACS2-210ENST00000550790 KRTAP25-1Q3LHN0 102 aa6.86□□□□□ -1.31
PACS2-210ENST00000550790 SYNE1Q8NF91 8797 aaKnown RBP6.86□□□□□ -1.31
PACS2-210ENST00000550790 KRTAP12-4P60329 112 aa6.84□□□□□ -1.31
PACS2-210ENST00000550790 KRTAP19-4Q3LI73 84 aa6.74□□□□□ -1.33
PACS2-210ENST00000550790 KRTAP23-1A1A580 65 aa6.68□□□□□ -1.34
PACS2-210ENST00000550790 ROMO1P60602 79 aa6.66□□□□□ -1.34
PACS2-210ENST00000550790 KRTAP15-1Q3LI76 137 aa6.57□□□□□ -1.36
PACS2-210ENST00000550790 LCE3CQ5T5A8 94 aa6.55□□□□□ -1.36
PACS2-210ENST00000550790 KRTAP5-2Q701N4 177 aa6.46□□□□□ -1.38
PACS2-210ENST00000550790 KRTAP4-11Q9BYQ6 195 aa6.45□□□□□ -1.38
PACS2-210ENST00000550790 BRK1Q8WUW1 75 aa6.42□□□□□ -1.38
PACS2-210ENST00000550790 MT1AP04731 61 aa6.41□□□□□ -1.38
PACS2-210ENST00000550790 KRTAP6-1Q3LI64 71 aa6.4□□□□□ -1.38
PACS2-210ENST00000550790 KRTAP5-8O75690 187 aa6.26□□□□□ -1.41
PACS2-210ENST00000550790 KRTAP9-4Q9BYQ2 154 aa6.25□□□□□ -1.41
PACS2-210ENST00000550790 AHNAKQ09666 5890 aaKnown RBP6.24□□□□□ -1.41
PACS2-210ENST00000550790 KRTAP9-6A8MVA2 160 aa6.23□□□□□ -1.41
PACS2-210ENST00000550790 OBSCNQ5VST9 7968 aa6.2□□□□□ -1.42
PACS2-210ENST00000550790 MUC5BQ9HC84 5762 aaPredicted RBP6.2□□□□□ -1.42
PACS2-210ENST00000550790 MUC5ACP98088 5654 aa6.19□□□□□ -1.42
PACS2-210ENST00000550790 KRTAP6-2Q3LI66 62 aa6.16□□□□□ -1.42
PACS2-210ENST00000550790 PMAIP1Q13794 54 aa6.03□□□□□ -1.44
PACS2-210ENST00000550790 KRTAP9-9Q9BYP9 154 aa5.93□□□□□ -1.46
PACS2-210ENST00000550790 PRO0628Q9UI54 55 aa5.92□□□□□ -1.46
PACS2-210ENST00000550790 KRTAP4-12Q9BQ66 201 aa5.91□□□□□ -1.46
PACS2-210ENST00000550790 MT3P25713 68 aa5.87□□□□□ -1.47
PACS2-210ENST00000550790 KRTAP5-1Q6L8H4 278 aa5.85□□□□□ -1.47
PACS2-210ENST00000550790 PRAC1Q96KF2 57 aa5.82□□□□□ -1.48
PACS2-210ENST00000550790 KTN1-AS1Q86SY8 53 aa5.59□□□□□ -1.51
PACS2-210ENST00000550790 LCE1EQ5T753 118 aa5.5□□□□□ -1.53
PACS2-210ENST00000550790 SVIPQ8NHG7 77 aa5.39□□□□□ -1.55
PACS2-210ENST00000550790 KRTAP4-2Q9BYR5 136 aa5.33□□□□□ -1.56
PACS2-210ENST00000550790 LCE1BQ5T7P3 118 aa5.13□□□□□ -1.59
PACS2-210ENST00000550790 LCE1CQ5T751 118 aa5.1□□□□□ -1.59
PACS2-210ENST00000550790 LUZP6Q538Z0 58 aa4.69□□□□□ -1.66
PACS2-210ENST00000550790 LCE3DQ9BYE3 92 aa4.65□□□□□ -1.67
PACS2-210ENST00000550790 KRTAP5-11Q6L8G4 156 aa4.63□□□□□ -1.67
PACS2-210ENST00000550790 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.62□□□□□ -1.67
PACS2-210ENST00000550790 LCE1FQ5T754 118 aa4.57□□□□□ -1.68
PACS2-210ENST00000550790 H3BS24 57 aa4.5□□□□□ -1.69
PACS2-210ENST00000550790 LCE3EQ5T5B0 92 aa4.32□□□□□ -1.72
PACS2-210ENST00000550790 KRTAP21-2Q3LI59 83 aa4.25□□□□□ -1.73
PACS2-210ENST00000550790 PHGR1C9JFL3 82 aa4.19□□□□□ -1.74
PACS2-210ENST00000550790 NDUFAF8A1L188 74 aa4.15□□□□□ -1.75
PACS2-210ENST00000550790 KRTAP4-4Q9BYR3 166 aa3.89□□□□□ -1.79
PACS2-210ENST00000550790 MUC19Q7Z5P9 8384 aa3.84□□□□□ -1.79
PACS2-210ENST00000550790 A0A0A0MQY5 61 aa3.63□□□□□ -1.83
PACS2-210ENST00000550790 INE1O15225 51 aa3.52□□□□□ -1.85
PACS2-210ENST00000550790 PRM1P04553 51 aa3.44□□□□□ -1.86
PACS2-210ENST00000550790 KRTAP21-1Q3LI58 79 aa3.2□□□□□ -1.9
PACS2-210ENST00000550790 MUC16Q8WXI7 14507 aa2.7□□□□□ -1.98
Retrieved 78 of 20,778 RNA–protein pairs in 90.2 ms