RNA–Protein interactions for RNA: ENST00000550718.1

GNPTAB-208, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-208ENST00000550718 ASPMQ8IZT6 3477 aa0.79□□□□□ -2.28
GNPTAB-208ENST00000550718 MT1EP04732 61 aa0.79□□□□□ -2.28
GNPTAB-208ENST00000550718 KRTAP6-2Q3LI66 62 aa0.78□□□□□ -2.28
GNPTAB-208ENST00000550718 SPRR2GQ9BYE4 73 aa0.78□□□□□ -2.28
GNPTAB-208ENST00000550718 CENPFP49454 3210 aa0.78□□□□□ -2.28
GNPTAB-208ENST00000550718 MUC5BQ9HC84 5762 aaPredicted RBP0.78□□□□□ -2.29
GNPTAB-208ENST00000550718 PKHD1P08F94 4074 aa0.77□□□□□ -2.29
GNPTAB-208ENST00000550718 LPAP08519 4548 aa0.77□□□□□ -2.29
GNPTAB-208ENST00000550718 CSMD2Q7Z408 3487 aa0.77□□□□□ -2.29
GNPTAB-208ENST00000550718 SPRR2FQ96RM1 72 aa0.77□□□□□ -2.29
GNPTAB-208ENST00000550718 LRP1Q07954 4544 aaKnown RBP0.77□□□□□ -2.29
GNPTAB-208ENST00000550718 PCNTO95613 3336 aa0.77□□□□□ -2.29
GNPTAB-208ENST00000550718 DYNC1H1Q14204 4646 aaKnown RBP0.76□□□□□ -2.29
GNPTAB-208ENST00000550718 VCANP13611 3396 aa0.76□□□□□ -2.29
GNPTAB-208ENST00000550718 UNC80Q8N2C7 3258 aa0.76□□□□□ -2.29
GNPTAB-208ENST00000550718 MT1LQ93083 61 aa0.75□□□□□ -2.29
GNPTAB-208ENST00000550718 EYSQ5T1H1 3165 aa0.75□□□□□ -2.29
GNPTAB-208ENST00000550718 DNAH5Q8TE73 4624 aa0.74□□□□□ -2.29
GNPTAB-208ENST00000550718 MUC17Q685J3 4493 aa0.74□□□□□ -2.29
GNPTAB-208ENST00000550718 DNAH14Q0VDD8 3507 aa0.73□□□□□ -2.29
GNPTAB-208ENST00000550718 SPRR2EP22531 72 aa0.73□□□□□ -2.29
GNPTAB-208ENST00000550718 MT1HP80294 61 aa0.72□□□□□ -2.29
GNPTAB-208ENST00000550718 FAT1Q14517 4588 aa0.72□□□□□ -2.29
GNPTAB-208ENST00000550718 SYNE1Q8NF91 8797 aaKnown RBP0.71□□□□□ -2.29
GNPTAB-208ENST00000550718 KRTAP21-1Q3LI58 79 aa0.71□□□□□ -2.3
GNPTAB-208ENST00000550718 MYO15AQ9UKN7 3530 aa0.71□□□□□ -2.3
GNPTAB-208ENST00000550718 BRCA2P51587 3418 aa0.68□□□□□ -2.3
GNPTAB-208ENST00000550718 LRP1BQ9NZR2 4599 aa0.67□□□□□ -2.3
GNPTAB-208ENST00000550718 KRTAP19-8Q3LI54 63 aa0.67□□□□□ -2.3
GNPTAB-208ENST00000550718 MT1XP80297 61 aa0.65□□□□□ -2.31
GNPTAB-208ENST00000550718 WDFY3Q8IZQ1 3526 aa0.65□□□□□ -2.31
GNPTAB-208ENST00000550718 STARD9Q9P2P6 4700 aa0.63□□□□□ -2.31
GNPTAB-208ENST00000550718 CDH23Q9H251 3354 aa0.62□□□□□ -2.31
GNPTAB-208ENST00000550718 HERC1Q15751 4861 aa0.6□□□□□ -2.31
GNPTAB-208ENST00000550718 MUC5ACP98088 5654 aa0.58□□□□□ -2.32
GNPTAB-208ENST00000550718 LRP2P98164 4655 aa0.57□□□□□ -2.32
GNPTAB-208ENST00000550718 MT2AP02795 61 aa0.56□□□□□ -2.32
GNPTAB-208ENST00000550718 MT1GP13640 62 aa0.56□□□□□ -2.32
GNPTAB-208ENST00000550718 KRTAP19-2Q3LHN2 52 aa0.56□□□□□ -2.32
GNPTAB-208ENST00000550718 KRTAP19-7Q3SYF9 63 aa0.56□□□□□ -2.32
GNPTAB-208ENST00000550718 MT1MQ8N339 61 aa0.55□□□□□ -2.32
GNPTAB-208ENST00000550718 MT1BP07438 61 aa0.54□□□□□ -2.32
GNPTAB-208ENST00000550718 MT1HL1P0DM35 61 aa0.5□□□□□ -2.33
GNPTAB-208ENST00000550718 MT1FP04733 61 aa0.48□□□□□ -2.33
GNPTAB-208ENST00000550718 KRTAP6-1Q3LI64 71 aa0.48□□□□□ -2.33
GNPTAB-208ENST00000550718 HERC2O95714 4834 aa0.47□□□□□ -2.33
GNPTAB-208ENST00000550718 USH2AO75445 5202 aa0.46□□□□□ -2.34
GNPTAB-208ENST00000550718 MDN1Q9NU22 5596 aa0.46□□□□□ -2.34
GNPTAB-208ENST00000550718 DNHD1Q96M86 4753 aa0.45□□□□□ -2.34
GNPTAB-208ENST00000550718 KMT2CQ8NEZ4 4911 aaKnown RBP0.44□□□□□ -2.34
GNPTAB-208ENST00000550718 HMCN2Q8NDA2 5059 aa0.44□□□□□ -2.34
GNPTAB-208ENST00000550718 KMT2DO14686 5537 aa0.44□□□□□ -2.34
GNPTAB-208ENST00000550718 PCLOQ9Y6V0 5065 aa0.43□□□□□ -2.34
GNPTAB-208ENST00000550718 PHGR1C9JFL3 82 aa0.43□□□□□ -2.34
GNPTAB-208ENST00000550718 MUC2Q02817 5179 aa0.43□□□□□ -2.34
GNPTAB-208ENST00000550718 SSPOA2VEC9 5147 aa0.42□□□□□ -2.34
GNPTAB-208ENST00000550718 HYDINQ4G0P3 5121 aa0.42□□□□□ -2.34
GNPTAB-208ENST00000550718 GPR98Q8WXG9 6306 aa0.42□□□□□ -2.34
GNPTAB-208ENST00000550718 FAT4Q6V0I7 4981 aa0.41□□□□□ -2.34
GNPTAB-208ENST00000550718 RYR1P21817 5038 aa0.4□□□□□ -2.34
GNPTAB-208ENST00000550718 BIRC6Q9NR09 4857 aa0.39□□□□□ -2.35
GNPTAB-208ENST00000550718 RYR3Q15413 4870 aa0.37□□□□□ -2.35
GNPTAB-208ENST00000550718 MUC12Q9UKN1 5478 aa0.33□□□□□ -2.36
GNPTAB-208ENST00000550718 UBR4Q5T4S7 5183 aa0.33□□□□□ -2.36
GNPTAB-208ENST00000550718 RNF213Q63HN8 5207 aa0.31□□□□□ -2.36
GNPTAB-208ENST00000550718 EPPK1P58107 5090 aaKnown RBP0.28□□□□□ -2.36
GNPTAB-208ENST00000550718 RYR2Q92736 4967 aa0.27□□□□□ -2.37
GNPTAB-208ENST00000550718 KIAA1109Q2LD37 5005 aa0.22□□□□□ -2.37
GNPTAB-208ENST00000550718 MT4P47944 62 aa0.22□□□□□ -2.37
GNPTAB-208ENST00000550718 ABCA13Q86UQ4 5058 aa0.21□□□□□ -2.38
GNPTAB-208ENST00000550718 KRTAP20-2Q3LI61 65 aa0.17□□□□□ -2.38
GNPTAB-208ENST00000550718 SYNE2Q8WXH0 6885 aaKnown RBP0.15□□□□□ -2.39
GNPTAB-208ENST00000550718 KRTAP19-6Q3LI70 58 aa0.15□□□□□ -2.39
GNPTAB-208ENST00000550718 DSTQ03001 7570 aaKnown RBP0.15□□□□□ -2.39
GNPTAB-208ENST00000550718 FSIP2Q5CZC0 6907 aa0.08□□□□□ -2.4
GNPTAB-208ENST00000550718 NEBP20929 6669 aa0.03□□□□□ -2.4
GNPTAB-208ENST00000550718 KRTAP20-1Q3LI63 56 aa0.01□□□□□ -2.41
GNPTAB-208ENST00000550718 MACF1Q9UPN3 7388 aaKnown RBP-0.03□□□□□ -2.41
Retrieved 78 of 20,778 RNA–protein pairs in 54.5 ms