RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 A8MU10 97 aa7.86□□□□□ -1.15
SMARCD1-209ENST00000550477 COX7CP15954 63 aa7.85□□□□□ -1.15
SMARCD1-209ENST00000550477 H7BZZ5 65 aa7.79□□□□□ -1.16
SMARCD1-209ENST00000550477 KRTAP5-7Q6L8G8 165 aa7.73□□□□□ -1.17
SMARCD1-209ENST00000550477 KRTAP5-3Q6L8H2 238 aa7.72□□□□□ -1.17
SMARCD1-209ENST00000550477 KRTAP12-3P60328 96 aa7.71□□□□□ -1.18
SMARCD1-209ENST00000550477 KRTAP4-7Q9BYR0 210 aa7.68□□□□□ -1.18
SMARCD1-209ENST00000550477 PRR15LQ9BU68 103 aa7.67□□□□□ -1.18
SMARCD1-209ENST00000550477 KRTAP20-2Q3LI61 65 aa7.63□□□□□ -1.19
SMARCD1-209ENST00000550477 SPRR5A0A1B0GTR4 108 aa7.6□□□□□ -1.19
SMARCD1-209ENST00000550477 KRTAP12-4P60329 112 aa7.59□□□□□ -1.19
SMARCD1-209ENST00000550477 KRTAP5-5Q701N2 237 aaPredicted RBP7.52□□□□□ -1.21
SMARCD1-209ENST00000550477 KRTAP19-4Q3LI73 84 aa7.38□□□□□ -1.23
SMARCD1-209ENST00000550477 ANAPC13Q9BS18 74 aa7.37□□□□□ -1.23
SMARCD1-209ENST00000550477 LINC01558Q9Y6Z2 57 aa7.37□□□□□ -1.23
SMARCD1-209ENST00000550477 UQCR11O14957 56 aa7.35□□□□□ -1.23
SMARCD1-209ENST00000550477 KRTAP25-1Q3LHN0 102 aa7.35□□□□□ -1.23
SMARCD1-209ENST00000550477 ATP5EP56381 51 aaPredicted RBP7.34□□□□□ -1.23
SMARCD1-209ENST00000550477 LOC100996750A0A140TA64 210 aa7.31□□□□□ -1.24
SMARCD1-209ENST00000550477 SYNE1Q8NF91 8797 aaKnown RBP7.27□□□□□ -1.25
SMARCD1-209ENST00000550477 K7ERS5 55 aa7.19□□□□□ -1.26
SMARCD1-209ENST00000550477 CCDC179H3BU77 68 aa7.15□□□□□ -1.26
SMARCD1-209ENST00000550477 MIR22HGQ0VDD5 57 aa7.11□□□□□ -1.27
SMARCD1-209ENST00000550477 KRTAP15-1Q3LI76 137 aa7.1□□□□□ -1.27
SMARCD1-209ENST00000550477 KRTAP4-11Q9BYQ6 195 aa7.09□□□□□ -1.27
SMARCD1-209ENST00000550477 KRTAP23-1A1A580 65 aa7.06□□□□□ -1.28
SMARCD1-209ENST00000550477 LCE3CQ5T5A8 94 aa7.06□□□□□ -1.28
SMARCD1-209ENST00000550477 MT1AP04731 61 aa6.95□□□□□ -1.3
SMARCD1-209ENST00000550477 KRTAP5-2Q701N4 177 aa6.95□□□□□ -1.3
SMARCD1-209ENST00000550477 TMEM258P61165 79 aa6.94□□□□□ -1.3
SMARCD1-209ENST00000550477 KRTAP6-1Q3LI64 71 aa6.89□□□□□ -1.31
SMARCD1-209ENST00000550477 KRTAP5-8O75690 187 aa6.81□□□□□ -1.32
SMARCD1-209ENST00000550477 KRTAP9-4Q9BYQ2 154 aa6.78□□□□□ -1.32
SMARCD1-209ENST00000550477 V9GYY9 64 aa6.76□□□□□ -1.33
SMARCD1-209ENST00000550477 OBSCNQ5VST9 7968 aa6.72□□□□□ -1.33
SMARCD1-209ENST00000550477 PSPHP1O15172 72 aa6.71□□□□□ -1.34
SMARCD1-209ENST00000550477 KRTAP6-2Q3LI66 62 aa6.69□□□□□ -1.34
SMARCD1-209ENST00000550477 RPS28P62857 69 aaKnown RBP6.68□□□□□ -1.34
SMARCD1-209ENST00000550477 CDC42SE1Q9NRR8 79 aa6.67□□□□□ -1.34
SMARCD1-209ENST00000550477 KRTAP9-9Q9BYP9 154 aa6.64□□□□□ -1.35
SMARCD1-209ENST00000550477 MUC5ACP98088 5654 aa6.63□□□□□ -1.35
SMARCD1-209ENST00000550477 Q1T7F1 81 aa6.62□□□□□ -1.35
SMARCD1-209ENST00000550477 AHNAKQ09666 5890 aaKnown RBP6.6□□□□□ -1.35
SMARCD1-209ENST00000550477 MUC5BQ9HC84 5762 aaPredicted RBP6.57□□□□□ -1.36
SMARCD1-209ENST00000550477 KRTAP9-6A8MVA2 160 aa6.54□□□□□ -1.36
SMARCD1-209ENST00000550477 A6NED7 52 aa6.52□□□□□ -1.37
SMARCD1-209ENST00000550477 ROMO1P60602 79 aa6.5□□□□□ -1.37
SMARCD1-209ENST00000550477 MT3P25713 68 aa6.44□□□□□ -1.38
SMARCD1-209ENST00000550477 KRTAP5-1Q6L8H4 278 aa6.31□□□□□ -1.4
SMARCD1-209ENST00000550477 KRTAP4-12Q9BQ66 201 aa6.24□□□□□ -1.41
SMARCD1-209ENST00000550477 LCE1EQ5T753 118 aa5.99□□□□□ -1.45
SMARCD1-209ENST00000550477 PCP4P48539 62 aa5.96□□□□□ -1.46
SMARCD1-209ENST00000550477 LCE1BQ5T7P3 118 aa5.67□□□□□ -1.5
SMARCD1-209ENST00000550477 H3BS24 57 aa5.65□□□□□ -1.5
SMARCD1-209ENST00000550477 KRTAP4-2Q9BYR5 136 aa5.6□□□□□ -1.51
SMARCD1-209ENST00000550477 LCE1CQ5T751 118 aa5.54□□□□□ -1.52
SMARCD1-209ENST00000550477 BRK1Q8WUW1 75 aa5.21□□□□□ -1.58
SMARCD1-209ENST00000550477 LCE1FQ5T754 118 aa5.05□□□□□ -1.6
SMARCD1-209ENST00000550477 LCE3DQ9BYE3 92 aa5.05□□□□□ -1.6
SMARCD1-209ENST00000550477 KRTAP5-11Q6L8G4 156 aa5.03□□□□□ -1.6
SMARCD1-209ENST00000550477 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.97□□□□□ -1.61
SMARCD1-209ENST00000550477 PMAIP1Q13794 54 aa4.9□□□□□ -1.63
SMARCD1-209ENST00000550477 PHGR1C9JFL3 82 aa4.71□□□□□ -1.66
SMARCD1-209ENST00000550477 PRAC1Q96KF2 57 aa4.71□□□□□ -1.66
SMARCD1-209ENST00000550477 LCE3EQ5T5B0 92 aa4.69□□□□□ -1.66
SMARCD1-209ENST00000550477 PRO0628Q9UI54 55 aa4.61□□□□□ -1.67
SMARCD1-209ENST00000550477 SVIPQ8NHG7 77 aa4.55□□□□□ -1.68
SMARCD1-209ENST00000550477 KRTAP21-2Q3LI59 83 aa4.53□□□□□ -1.68
SMARCD1-209ENST00000550477 KTN1-AS1Q86SY8 53 aa4.4□□□□□ -1.71
SMARCD1-209ENST00000550477 KRTAP4-4Q9BYR3 166 aa4.22□□□□□ -1.73
SMARCD1-209ENST00000550477 LUZP6Q538Z0 58 aa4.19□□□□□ -1.74
SMARCD1-209ENST00000550477 MUC19Q7Z5P9 8384 aa4.16□□□□□ -1.74
SMARCD1-209ENST00000550477 KRTAP21-1Q3LI58 79 aa3.61□□□□□ -1.83
SMARCD1-209ENST00000550477 PRM1P04553 51 aa3.26□□□□□ -1.89
SMARCD1-209ENST00000550477 NDUFAF8A1L188 74 aa3.21□□□□□ -1.9
SMARCD1-209ENST00000550477 A0A0A0MQY5 61 aa3.04□□□□□ -1.92
SMARCD1-209ENST00000550477 MUC16Q8WXI7 14507 aa2.86□□□□□ -1.95
SMARCD1-209ENST00000550477 INE1O15225 51 aa2.61□□□□□ -1.99
Retrieved 78 of 20,778 RNA–protein pairs in 67.2 ms