RNA–Protein interactions for RNA: ENST00000550205.1

PXN-216, Transcript of paxillin, humanhuman

TSL 4

Gene PXN, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-216ENST00000550205 A0A1B0GU33 70 aa3.35□□□□□ -1.87
PXN-216ENST00000550205 ANAPC13Q9BS18 74 aa3.35□□□□□ -1.87
PXN-216ENST00000550205 KRTAP5-7Q6L8G8 165 aa3.33□□□□□ -1.88
PXN-216ENST00000550205 SERP2Q8N6R1 65 aa3.33□□□□□ -1.88
PXN-216ENST00000550205 C10orf95Q9H7T3 257 aa3.33□□□□□ -1.88
PXN-216ENST00000550205 LCE3AQ5TA76 89 aa3.32□□□□□ -1.88
PXN-216ENST00000550205 COX7CP15954 63 aa3.3□□□□□ -1.88
PXN-216ENST00000550205 KRTAP5-3Q6L8H2 238 aa3.3□□□□□ -1.88
PXN-216ENST00000550205 KRTAP19-4Q3LI73 84 aa3.29□□□□□ -1.88
PXN-216ENST00000550205 H3BS24 57 aa3.28□□□□□ -1.88
PXN-216ENST00000550205 CCDC179H3BU77 68 aa3.28□□□□□ -1.88
PXN-216ENST00000550205 TNP1P09430 55 aa3.27□□□□□ -1.89
PXN-216ENST00000550205 KRTAP4-11Q9BYQ6 195 aa3.27□□□□□ -1.89
PXN-216ENST00000550205 SMIM26A0A096LP01 95 aa3.25□□□□□ -1.89
PXN-216ENST00000550205 KRTAP20-2Q3LI61 65 aa3.25□□□□□ -1.89
PXN-216ENST00000550205 KRTAP5-5Q701N2 237 aaPredicted RBP3.24□□□□□ -1.89
PXN-216ENST00000550205 SPRR5A0A1B0GTR4 108 aa3.23□□□□□ -1.89
PXN-216ENST00000550205 A8MU10 97 aa3.22□□□□□ -1.89
PXN-216ENST00000550205 KRTAP12-3P60328 96 aa3.21□□□□□ -1.9
PXN-216ENST00000550205 A0A1B0GU69 56 aa3.2□□□□□ -1.9
PXN-216ENST00000550205 TMEM258P61165 79 aa3.19□□□□□ -1.9
PXN-216ENST00000550205 H7BZZ5 65 aa3.18□□□□□ -1.9
PXN-216ENST00000550205 KRTAP12-4P60329 112 aa3.16□□□□□ -1.9
PXN-216ENST00000550205 ATP5EP56381 51 aaPredicted RBP3.14□□□□□ -1.91
PXN-216ENST00000550205 RPS28P62857 69 aaKnown RBP3.14□□□□□ -1.91
PXN-216ENST00000550205 SYNE1Q8NF91 8797 aaKnown RBP3.11□□□□□ -1.91
PXN-216ENST00000550205 PRR15LQ9BU68 103 aa3.04□□□□□ -1.92
PXN-216ENST00000550205 KRTAP25-1Q3LHN0 102 aa3□□□□□ -1.93
PXN-216ENST00000550205 KRTAP5-2Q701N4 177 aa2.99□□□□□ -1.93
PXN-216ENST00000550205 LINC01558Q9Y6Z2 57 aa2.98□□□□□ -1.93
PXN-216ENST00000550205 Q1T7F1 81 aa2.96□□□□□ -1.94
PXN-216ENST00000550205 UQCR11O14957 56 aa2.95□□□□□ -1.94
PXN-216ENST00000550205 MUC5ACP98088 5654 aa2.95□□□□□ -1.94
PXN-216ENST00000550205 LCE3CQ5T5A8 94 aa2.94□□□□□ -1.94
PXN-216ENST00000550205 KRTAP5-8O75690 187 aa2.93□□□□□ -1.94
PXN-216ENST00000550205 KRTAP15-1Q3LI76 137 aa2.93□□□□□ -1.94
PXN-216ENST00000550205 V9GYY9 64 aa2.93□□□□□ -1.94
PXN-216ENST00000550205 KRTAP23-1A1A580 65 aa2.92□□□□□ -1.94
PXN-216ENST00000550205 MT1AP04731 61 aa2.92□□□□□ -1.94
PXN-216ENST00000550205 MUC5BQ9HC84 5762 aaPredicted RBP2.92□□□□□ -1.94
PXN-216ENST00000550205 AHNAKQ09666 5890 aaKnown RBP2.91□□□□□ -1.94
PXN-216ENST00000550205 KRTAP6-1Q3LI64 71 aa2.91□□□□□ -1.94
PXN-216ENST00000550205 OBSCNQ5VST9 7968 aa2.86□□□□□ -1.95
PXN-216ENST00000550205 MIR22HGQ0VDD5 57 aa2.85□□□□□ -1.95
PXN-216ENST00000550205 PSPHP1O15172 72 aa2.83□□□□□ -1.96
PXN-216ENST00000550205 K7ERS5 55 aa2.82□□□□□ -1.96
PXN-216ENST00000550205 KRTAP6-2Q3LI66 62 aa2.82□□□□□ -1.96
PXN-216ENST00000550205 KRTAP9-6A8MVA2 160 aa2.79□□□□□ -1.96
PXN-216ENST00000550205 PRO0628Q9UI54 55 aa2.79□□□□□ -1.96
PXN-216ENST00000550205 BRK1Q8WUW1 75 aa2.76□□□□□ -1.97
PXN-216ENST00000550205 CDC42SE1Q9NRR8 79 aa2.76□□□□□ -1.97
PXN-216ENST00000550205 A6NED7 52 aa2.75□□□□□ -1.97
PXN-216ENST00000550205 SVIPQ8NHG7 77 aa2.73□□□□□ -1.97
PXN-216ENST00000550205 KRTAP5-1Q6L8H4 278 aa2.71□□□□□ -1.98
PXN-216ENST00000550205 MT3P25713 68 aa2.68□□□□□ -1.98
PXN-216ENST00000550205 PMAIP1Q13794 54 aa2.62□□□□□ -1.99
PXN-216ENST00000550205 ROMO1P60602 79 aa2.61□□□□□ -1.99
PXN-216ENST00000550205 KTN1-AS1Q86SY8 53 aa2.56□□□□□ -2
PXN-216ENST00000550205 LCE1EQ5T753 118 aa2.55□□□□□ -2
PXN-216ENST00000550205 PRAC1Q96KF2 57 aa2.43□□□□□ -2.02
PXN-216ENST00000550205 LCE1CQ5T751 118 aa2.37□□□□□ -2.03
PXN-216ENST00000550205 LCE1BQ5T7P3 118 aa2.37□□□□□ -2.03
PXN-216ENST00000550205 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.34□□□□□ -2.03
PXN-216ENST00000550205 KRTAP5-11Q6L8G4 156 aa2.21□□□□□ -2.06
PXN-216ENST00000550205 LCE1FQ5T754 118 aa2.14□□□□□ -2.07
PXN-216ENST00000550205 LCE3DQ9BYE3 92 aa2.07□□□□□ -2.08
PXN-216ENST00000550205 PHGR1C9JFL3 82 aa1.99□□□□□ -2.09
PXN-216ENST00000550205 LUZP6Q538Z0 58 aa1.97□□□□□ -2.09
PXN-216ENST00000550205 NDUFAF8A1L188 74 aa1.96□□□□□ -2.1
PXN-216ENST00000550205 KRTAP21-2Q3LI59 83 aa1.94□□□□□ -2.1
PXN-216ENST00000550205 KRTAP4-4Q9BYR3 166 aa1.94□□□□□ -2.1
PXN-216ENST00000550205 LCE3EQ5T5B0 92 aa1.91□□□□□ -2.1
PXN-216ENST00000550205 A0A0A0MQY5 61 aa1.83□□□□□ -2.12
PXN-216ENST00000550205 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
PXN-216ENST00000550205 INE1O15225 51 aa1.68□□□□□ -2.14
PXN-216ENST00000550205 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
PXN-216ENST00000550205 PRM1P04553 51 aa1.31□□□□□ -2.2
PXN-216ENST00000550205 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 559.9 ms