RNA–Protein interactions for RNA: ENST00000550173.1

SLC38A1-208, Transcript of solute carrier family 38 member 1, humanhuman

TSL 5

Gene SLC38A1, Length 891 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-208ENST00000550173 A8MU10 97 aa6.98□□□□□ -1.29
SLC38A1-208ENST00000550173 V9GYY9 64 aa6.98□□□□□ -1.29
SLC38A1-208ENST00000550173 LCE3AQ5TA76 89 aa6.97□□□□□ -1.29
SLC38A1-208ENST00000550173 HMCN1Q96RW7 5635 aa6.97□□□□□ -1.29
SLC38A1-208ENST00000550173 C10orf95Q9H7T3 257 aa6.97□□□□□ -1.29
SLC38A1-208ENST00000550173 Q1T7F1 81 aa6.96□□□□□ -1.3
SLC38A1-208ENST00000550173 PRR15LQ9BU68 103 aa6.96□□□□□ -1.3
SLC38A1-208ENST00000550173 KRTAP4-3Q9BYR4 195 aa6.94□□□□□ -1.3
SLC38A1-208ENST00000550173 TNP1P09430 55 aa6.93□□□□□ -1.3
SLC38A1-208ENST00000550173 KRTAP5-4Q6L8H1 288 aa6.87□□□□□ -1.31
SLC38A1-208ENST00000550173 AHNAK2Q8IVF2 5795 aa6.83□□□□□ -1.32
SLC38A1-208ENST00000550173 PSPHP1O15172 72 aa6.8□□□□□ -1.32
SLC38A1-208ENST00000550173 KRTAP4-6Q9BYQ5 205 aa6.8□□□□□ -1.32
SLC38A1-208ENST00000550173 UQCR11O14957 56 aa6.74□□□□□ -1.33
SLC38A1-208ENST00000550173 KRTAP5-10Q6L8G5 202 aa6.71□□□□□ -1.34
SLC38A1-208ENST00000550173 KRTAP4-7Q9BYR0 210 aa6.71□□□□□ -1.34
SLC38A1-208ENST00000550173 KRTAP12-3P60328 96 aa6.69□□□□□ -1.34
SLC38A1-208ENST00000550173 MIR22HGQ0VDD5 57 aa6.63□□□□□ -1.35
SLC38A1-208ENST00000550173 A6NED7 52 aa6.61□□□□□ -1.35
SLC38A1-208ENST00000550173 KRTAP5-3Q6L8H2 238 aa6.52□□□□□ -1.37
SLC38A1-208ENST00000550173 KRTAP20-2Q3LI61 65 aa6.51□□□□□ -1.37
SLC38A1-208ENST00000550173 KRTAP5-7Q6L8G8 165 aa6.49□□□□□ -1.37
SLC38A1-208ENST00000550173 KRTAP5-5Q701N2 237 aaPredicted RBP6.49□□□□□ -1.37
SLC38A1-208ENST00000550173 CDC42SE1Q9NRR8 79 aa6.48□□□□□ -1.37
SLC38A1-208ENST00000550173 SPRR5A0A1B0GTR4 108 aa6.45□□□□□ -1.38
SLC38A1-208ENST00000550173 KRTAP12-4P60329 112 aa6.42□□□□□ -1.38
SLC38A1-208ENST00000550173 KRTAP25-1Q3LHN0 102 aa6.41□□□□□ -1.38
SLC38A1-208ENST00000550173 K7ERS5 55 aa6.4□□□□□ -1.38
SLC38A1-208ENST00000550173 LOC100996750A0A140TA64 210 aa6.37□□□□□ -1.39
SLC38A1-208ENST00000550173 BRK1Q8WUW1 75 aa6.31□□□□□ -1.4
SLC38A1-208ENST00000550173 SYNE1Q8NF91 8797 aaKnown RBP6.29□□□□□ -1.4
SLC38A1-208ENST00000550173 KRTAP19-4Q3LI73 84 aa6.28□□□□□ -1.4
SLC38A1-208ENST00000550173 KRTAP15-1Q3LI76 137 aa6.18□□□□□ -1.42
SLC38A1-208ENST00000550173 KRTAP23-1A1A580 65 aa6.14□□□□□ -1.43
SLC38A1-208ENST00000550173 LCE3CQ5T5A8 94 aa6.14□□□□□ -1.43
SLC38A1-208ENST00000550173 ROMO1P60602 79 aa6.08□□□□□ -1.44
SLC38A1-208ENST00000550173 PRO0628Q9UI54 55 aa6.07□□□□□ -1.44
SLC38A1-208ENST00000550173 MT1AP04731 61 aa6□□□□□ -1.45
SLC38A1-208ENST00000550173 KRTAP4-11Q9BYQ6 195 aa6□□□□□ -1.45
SLC38A1-208ENST00000550173 PMAIP1Q13794 54 aa5.98□□□□□ -1.45
SLC38A1-208ENST00000550173 KRTAP6-1Q3LI64 71 aa5.98□□□□□ -1.45
SLC38A1-208ENST00000550173 KRTAP5-2Q701N4 177 aa5.97□□□□□ -1.45
SLC38A1-208ENST00000550173 KRTAP9-4Q9BYQ2 154 aa5.82□□□□□ -1.48
SLC38A1-208ENST00000550173 KRTAP5-8O75690 187 aa5.8□□□□□ -1.48
SLC38A1-208ENST00000550173 KRTAP9-6A8MVA2 160 aa5.79□□□□□ -1.48
SLC38A1-208ENST00000550173 KRTAP6-2Q3LI66 62 aa5.76□□□□□ -1.49
SLC38A1-208ENST00000550173 OBSCNQ5VST9 7968 aa5.68□□□□□ -1.5
SLC38A1-208ENST00000550173 AHNAKQ09666 5890 aaKnown RBP5.67□□□□□ -1.5
SLC38A1-208ENST00000550173 KTN1-AS1Q86SY8 53 aa5.65□□□□□ -1.5
SLC38A1-208ENST00000550173 MUC5BQ9HC84 5762 aaPredicted RBP5.65□□□□□ -1.51
SLC38A1-208ENST00000550173 MUC5ACP98088 5654 aa5.64□□□□□ -1.51
SLC38A1-208ENST00000550173 PRAC1Q96KF2 57 aa5.59□□□□□ -1.51
SLC38A1-208ENST00000550173 KRTAP9-9Q9BYP9 154 aa5.56□□□□□ -1.52
SLC38A1-208ENST00000550173 MT3P25713 68 aa5.51□□□□□ -1.53
SLC38A1-208ENST00000550173 SVIPQ8NHG7 77 aa5.51□□□□□ -1.53
SLC38A1-208ENST00000550173 KRTAP5-1Q6L8H4 278 aa5.4□□□□□ -1.54
SLC38A1-208ENST00000550173 KRTAP4-12Q9BQ66 201 aa5.22□□□□□ -1.57
SLC38A1-208ENST00000550173 H3BS24 57 aa5.1□□□□□ -1.59
SLC38A1-208ENST00000550173 LCE1EQ5T753 118 aa5.09□□□□□ -1.59
SLC38A1-208ENST00000550173 LCE1BQ5T7P3 118 aa4.85□□□□□ -1.63
SLC38A1-208ENST00000550173 KRTAP4-2Q9BYR5 136 aa4.84□□□□□ -1.63
SLC38A1-208ENST00000550173 LCE1CQ5T751 118 aa4.72□□□□□ -1.65
SLC38A1-208ENST00000550173 LUZP6Q538Z0 58 aa4.65□□□□□ -1.67
SLC38A1-208ENST00000550173 A0A0A0MQY5 61 aa4.38□□□□□ -1.71
SLC38A1-208ENST00000550173 LCE3DQ9BYE3 92 aa4.38□□□□□ -1.71
SLC38A1-208ENST00000550173 NDUFAF8A1L188 74 aa4.3□□□□□ -1.72
SLC38A1-208ENST00000550173 KRTAP5-11Q6L8G4 156 aa4.3□□□□□ -1.72
SLC38A1-208ENST00000550173 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.25□□□□□ -1.73
SLC38A1-208ENST00000550173 LCE1FQ5T754 118 aa4.24□□□□□ -1.73
SLC38A1-208ENST00000550173 LCE3EQ5T5B0 92 aa4.09□□□□□ -1.75
SLC38A1-208ENST00000550173 PHGR1C9JFL3 82 aa3.94□□□□□ -1.78
SLC38A1-208ENST00000550173 KRTAP21-2Q3LI59 83 aa3.93□□□□□ -1.78
SLC38A1-208ENST00000550173 KRTAP4-4Q9BYR3 166 aa3.67□□□□□ -1.82
SLC38A1-208ENST00000550173 INE1O15225 51 aa3.61□□□□□ -1.83
SLC38A1-208ENST00000550173 MUC19Q7Z5P9 8384 aa3.51□□□□□ -1.85
SLC38A1-208ENST00000550173 PRM1P04553 51 aa3.12□□□□□ -1.91
SLC38A1-208ENST00000550173 KRTAP21-1Q3LI58 79 aa2.99□□□□□ -1.93
SLC38A1-208ENST00000550173 MUC16Q8WXI7 14507 aa2.52□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 262 ms