RNA–Protein interactions for RNA: ENST00000550150.1

SMARCC2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,244 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-208ENST00000550150 MACF1Q9UPN3 7388 aaKnown RBP3.92□□□□□ -1.78
SMARCC2-208ENST00000550150 KRTAP19-6Q3LI70 58 aa3.91□□□□□ -1.78
SMARCC2-208ENST00000550150 LCE5AQ5TCM9 118 aa3.91□□□□□ -1.78
SMARCC2-208ENST00000550150 KRTAP4-7Q9BYR0 210 aa3.9□□□□□ -1.79
SMARCC2-208ENST00000550150 SYNE2Q8WXH0 6885 aaKnown RBP3.86□□□□□ -1.79
SMARCC2-208ENST00000550150 KRTAP9-6A8MVA2 160 aa3.85□□□□□ -1.79
SMARCC2-208ENST00000550150 MUC12Q9UKN1 5478 aa3.83□□□□□ -1.8
SMARCC2-208ENST00000550150 CRCT1Q9UGL9 99 aa3.74□□□□□ -1.81
SMARCC2-208ENST00000550150 KRTAP19-7Q3SYF9 63 aa3.71□□□□□ -1.82
SMARCC2-208ENST00000550150 MDN1Q9NU22 5596 aa3.7□□□□□ -1.82
SMARCC2-208ENST00000550150 DSTQ03001 7570 aaKnown RBP3.7□□□□□ -1.82
SMARCC2-208ENST00000550150 LOC100996750A0A140TA64 210 aa3.62□□□□□ -1.83
SMARCC2-208ENST00000550150 KRTAP2-3P0C7H8 128 aa3.62□□□□□ -1.83
SMARCC2-208ENST00000550150 KRTAP2-4Q9BYR9 128 aa3.62□□□□□ -1.83
SMARCC2-208ENST00000550150 KRTAP2-1Q9BYU5 128 aa3.62□□□□□ -1.83
SMARCC2-208ENST00000550150 MT1LQ93083 61 aa3.61□□□□□ -1.83
SMARCC2-208ENST00000550150 KRTAP4-3Q9BYR4 195 aa3.6□□□□□ -1.83
SMARCC2-208ENST00000550150 MT1EP04732 61 aa3.59□□□□□ -1.83
SMARCC2-208ENST00000550150 KRTAP4-12Q9BQ66 201 aa3.59□□□□□ -1.84
SMARCC2-208ENST00000550150 SYNE1Q8NF91 8797 aaKnown RBP3.57□□□□□ -1.84
SMARCC2-208ENST00000550150 MT1GP13640 62 aa3.56□□□□□ -1.84
SMARCC2-208ENST00000550150 OBSCNQ5VST9 7968 aa3.52□□□□□ -1.85
SMARCC2-208ENST00000550150 SPRR2FQ96RM1 72 aa3.51□□□□□ -1.85
SMARCC2-208ENST00000550150 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.51□□□□□ -1.85
SMARCC2-208ENST00000550150 LCE1FQ5T754 118 aa3.48□□□□□ -1.85
SMARCC2-208ENST00000550150 KRTAP12-4P60329 112 aa3.47□□□□□ -1.85
SMARCC2-208ENST00000550150 KRTAP5-9P26371 169 aa3.45□□□□□ -1.86
SMARCC2-208ENST00000550150 KRTAP4-6Q9BYQ5 205 aa3.42□□□□□ -1.86
SMARCC2-208ENST00000550150 LCE1AQ5T7P2 110 aa3.42□□□□□ -1.86
SMARCC2-208ENST00000550150 KRTAP19-3Q7Z4W3 81 aa3.41□□□□□ -1.86
SMARCC2-208ENST00000550150 LCE3BQ5TA77 95 aa3.4□□□□□ -1.86
SMARCC2-208ENST00000550150 MT1MQ8N339 61 aa3.38□□□□□ -1.87
SMARCC2-208ENST00000550150 KRTAP4-9Q9BYQ8 210 aa3.37□□□□□ -1.87
SMARCC2-208ENST00000550150 KRTAP6-3Q3LI67 103 aa3.32□□□□□ -1.88
SMARCC2-208ENST00000550150 NEBP20929 6669 aa3.3□□□□□ -1.88
SMARCC2-208ENST00000550150 SPRR2EP22531 72 aa3.3□□□□□ -1.88
SMARCC2-208ENST00000550150 SPRR2BP35325 72 aa3.3□□□□□ -1.88
SMARCC2-208ENST00000550150 SPRR2AP35326 72 aa3.3□□□□□ -1.88
SMARCC2-208ENST00000550150 KRTAP2-2Q9BYT5 123 aa3.16□□□□□ -1.9
SMARCC2-208ENST00000550150 SPRR2DP22532 72 aa3.16□□□□□ -1.9
SMARCC2-208ENST00000550150 KRTAP6-1Q3LI64 71 aa3.13□□□□□ -1.91
SMARCC2-208ENST00000550150 KRTAP5-5Q701N2 237 aaPredicted RBP3.13□□□□□ -1.91
SMARCC2-208ENST00000550150 LCE3DQ9BYE3 92 aa3.13□□□□□ -1.91
SMARCC2-208ENST00000550150 LCE1DQ5T752 114 aa3.1□□□□□ -1.91
SMARCC2-208ENST00000550150 PRM1P04553 51 aa3.1□□□□□ -1.91
SMARCC2-208ENST00000550150 LCE3EQ5T5B0 92 aa3.1□□□□□ -1.91
SMARCC2-208ENST00000550150 MT3P25713 68 aa3.07□□□□□ -1.92
SMARCC2-208ENST00000550150 MT1AP04731 61 aa2.98□□□□□ -1.93
SMARCC2-208ENST00000550150 KRTAP4-11Q9BYQ6 195 aa2.97□□□□□ -1.93
SMARCC2-208ENST00000550150 KRTAP6-2Q3LI66 62 aa2.91□□□□□ -1.94
SMARCC2-208ENST00000550150 HMCN1Q96RW7 5635 aa2.91□□□□□ -1.94
SMARCC2-208ENST00000550150 KRTAP5-4Q6L8H1 288 aa2.89□□□□□ -1.95
SMARCC2-208ENST00000550150 LCE1EQ5T753 118 aa2.85□□□□□ -1.95
SMARCC2-208ENST00000550150 KRTAP20-1Q3LI63 56 aa2.84□□□□□ -1.96
SMARCC2-208ENST00000550150 MT4P47944 62 aa2.83□□□□□ -1.96
SMARCC2-208ENST00000550150 KRTAP4-2Q9BYR5 136 aa2.78□□□□□ -1.96
SMARCC2-208ENST00000550150 KRTAP20-2Q3LI61 65 aa2.72□□□□□ -1.97
SMARCC2-208ENST00000550150 KRTAP5-3Q6L8H2 238 aa2.64□□□□□ -1.99
SMARCC2-208ENST00000550150 KRTAP5-2Q701N4 177 aa2.64□□□□□ -1.99
SMARCC2-208ENST00000550150 GPR98Q8WXG9 6306 aa2.59□□□□□ -2
SMARCC2-208ENST00000550150 AHNAK2Q8IVF2 5795 aa2.5□□□□□ -2.01
SMARCC2-208ENST00000550150 KRTAP5-7Q6L8G8 165 aa2.42□□□□□ -2.02
SMARCC2-208ENST00000550150 LCE1BQ5T7P3 118 aa2.4□□□□□ -2.03
SMARCC2-208ENST00000550150 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
SMARCC2-208ENST00000550150 MUC5ACP98088 5654 aa2.36□□□□□ -2.03
SMARCC2-208ENST00000550150 KRTAP5-1Q6L8H4 278 aa2.32□□□□□ -2.04
SMARCC2-208ENST00000550150 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
SMARCC2-208ENST00000550150 KRTAP5-8O75690 187 aa2.29□□□□□ -2.04
SMARCC2-208ENST00000550150 KRTAP5-10Q6L8G5 202 aa2.28□□□□□ -2.04
SMARCC2-208ENST00000550150 AHNAKQ09666 5890 aaKnown RBP2.27□□□□□ -2.05
SMARCC2-208ENST00000550150 LCE1CQ5T751 118 aa2.16□□□□□ -2.06
SMARCC2-208ENST00000550150 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.13□□□□□ -2.07
SMARCC2-208ENST00000550150 KRTAP5-11Q6L8G4 156 aa2.11□□□□□ -2.07
SMARCC2-208ENST00000550150 KRTAP4-4Q9BYR3 166 aa2.05□□□□□ -2.08
SMARCC2-208ENST00000550150 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
SMARCC2-208ENST00000550150 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
SMARCC2-208ENST00000550150 PHGR1C9JFL3 82 aa1.65□□□□□ -2.15
SMARCC2-208ENST00000550150 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 127.6 ms