RNA–Protein interactions for RNA: ENST00000550103.2

EFCAB11-203, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 647 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-203ENST00000550103 SPRR2GQ9BYE4 73 aa2.99□□□□□ -1.93
EFCAB11-203ENST00000550103 KRTAP12-1P59990 96 aa2.98□□□□□ -1.93
EFCAB11-203ENST00000550103 KRTAP5-11Q6L8G4 156 aa2.98□□□□□ -1.93
EFCAB11-203ENST00000550103 KTN1-AS1Q86SY8 53 aa2.95□□□□□ -1.94
EFCAB11-203ENST00000550103 PLAC4Q8WY50 150 aa2.95□□□□□ -1.94
EFCAB11-203ENST00000550103 ROMO1P60602 79 aa2.94□□□□□ -1.94
EFCAB11-203ENST00000550103 USH2AO75445 5202 aa2.92□□□□□ -1.94
EFCAB11-203ENST00000550103 KRTAP19-8Q3LI54 63 aa2.9□□□□□ -1.95
EFCAB11-203ENST00000550103 SSPOA2VEC9 5147 aa2.9□□□□□ -1.95
EFCAB11-203ENST00000550103 PRO2289Q9P1D8 64 aa2.88□□□□□ -1.95
EFCAB11-203ENST00000550103 KRTAP19-6Q3LI70 58 aa2.86□□□□□ -1.95
EFCAB11-203ENST00000550103 LCE3DQ9BYE3 92 aa2.86□□□□□ -1.95
EFCAB11-203ENST00000550103 MACF1Q9UPN3 7388 aaKnown RBP2.83□□□□□ -1.96
EFCAB11-203ENST00000550103 MT1BP07438 61 aa2.83□□□□□ -1.96
EFCAB11-203ENST00000550103 FCGBPQ9Y6R7 5405 aaPredicted RBP2.81□□□□□ -1.96
EFCAB11-203ENST00000550103 TNP1P09430 55 aa2.81□□□□□ -1.96
EFCAB11-203ENST00000550103 C10orf95Q9H7T3 257 aa2.8□□□□□ -1.96
EFCAB11-203ENST00000550103 PP632Q6XCG6 107 aa2.78□□□□□ -1.96
EFCAB11-203ENST00000550103 MT1XP80297 61 aa2.74□□□□□ -1.97
EFCAB11-203ENST00000550103 SYNE2Q8WXH0 6885 aaKnown RBP2.73□□□□□ -1.97
EFCAB11-203ENST00000550103 KRTAP6-3Q3LI67 103 aa2.65□□□□□ -1.99
EFCAB11-203ENST00000550103 LCE3AQ5TA76 89 aa2.65□□□□□ -1.99
EFCAB11-203ENST00000550103 KRTAP5-1Q6L8H4 278 aa2.63□□□□□ -1.99
EFCAB11-203ENST00000550103 KRTAP5-9P26371 169 aa2.61□□□□□ -1.99
EFCAB11-203ENST00000550103 KRTAP8-1Q8IUC2 63 aa2.6□□□□□ -1.99
EFCAB11-203ENST00000550103 KRTAP5-4Q6L8H1 288 aa2.58□□□□□ -2
EFCAB11-203ENST00000550103 KMT2DO14686 5537 aa2.57□□□□□ -2
EFCAB11-203ENST00000550103 SPRR2FQ96RM1 72 aa2.56□□□□□ -2
EFCAB11-203ENST00000550103 KRTAP4-4Q9BYR3 166 aa2.55□□□□□ -2
EFCAB11-203ENST00000550103 NEBP20929 6669 aa2.55□□□□□ -2
EFCAB11-203ENST00000550103 MUC12Q9UKN1 5478 aa2.54□□□□□ -2
EFCAB11-203ENST00000550103 KRTAP12-3P60328 96 aa2.53□□□□□ -2
EFCAB11-203ENST00000550103 SPRR2EP22531 72 aa2.52□□□□□ -2.01
EFCAB11-203ENST00000550103 SPRR2BP35325 72 aa2.52□□□□□ -2.01
EFCAB11-203ENST00000550103 SPRR2AP35326 72 aa2.52□□□□□ -2.01
EFCAB11-203ENST00000550103 KRTAP20-1Q3LI63 56 aa2.47□□□□□ -2.01
EFCAB11-203ENST00000550103 KRTAP19-5Q3LI72 72 aa2.47□□□□□ -2.01
EFCAB11-203ENST00000550103 KRTAP5-5Q701N2 237 aaPredicted RBP2.45□□□□□ -2.02
EFCAB11-203ENST00000550103 MDN1Q9NU22 5596 aa2.43□□□□□ -2.02
EFCAB11-203ENST00000550103 SPRR2DP22532 72 aa2.43□□□□□ -2.02
EFCAB11-203ENST00000550103 KRTAP19-7Q3SYF9 63 aa2.43□□□□□ -2.02
EFCAB11-203ENST00000550103 MT1EP04732 61 aa2.42□□□□□ -2.02
EFCAB11-203ENST00000550103 KRTAP2-3P0C7H8 128 aa2.38□□□□□ -2.03
EFCAB11-203ENST00000550103 KRTAP2-4Q9BYR9 128 aa2.38□□□□□ -2.03
EFCAB11-203ENST00000550103 MT1LQ93083 61 aa2.37□□□□□ -2.03
EFCAB11-203ENST00000550103 MT1GP13640 62 aa2.34□□□□□ -2.03
EFCAB11-203ENST00000550103 KRTAP19-3Q7Z4W3 81 aa2.34□□□□□ -2.03
EFCAB11-203ENST00000550103 KRTAP2-1Q9BYU5 128 aa2.31□□□□□ -2.04
EFCAB11-203ENST00000550103 INE1O15225 51 aa2.3□□□□□ -2.04
EFCAB11-203ENST00000550103 LCE1CQ5T751 118 aa2.29□□□□□ -2.04
EFCAB11-203ENST00000550103 LCE1BQ5T7P3 118 aa2.29□□□□□ -2.04
EFCAB11-203ENST00000550103 OBSCNQ5VST9 7968 aa2.29□□□□□ -2.04
EFCAB11-203ENST00000550103 MT1MQ8N339 61 aa2.27□□□□□ -2.05
EFCAB11-203ENST00000550103 DSTQ03001 7570 aaKnown RBP2.26□□□□□ -2.05
EFCAB11-203ENST00000550103 KRTAP12-4P60329 112 aa2.25□□□□□ -2.05
EFCAB11-203ENST00000550103 KRTAP4-3Q9BYR4 195 aa2.22□□□□□ -2.05
EFCAB11-203ENST00000550103 KRTAP5-2Q701N4 177 aa2.21□□□□□ -2.06
EFCAB11-203ENST00000550103 MT4P47944 62 aa2.12□□□□□ -2.07
EFCAB11-203ENST00000550103 GPR98Q8WXG9 6306 aa2.08□□□□□ -2.08
EFCAB11-203ENST00000550103 MT1AP04731 61 aa2.04□□□□□ -2.08
EFCAB11-203ENST00000550103 HMCN1Q96RW7 5635 aa2□□□□□ -2.09
EFCAB11-203ENST00000550103 KRTAP20-2Q3LI61 65 aa1.98□□□□□ -2.09
EFCAB11-203ENST00000550103 KRTAP6-1Q3LI64 71 aa1.96□□□□□ -2.1
EFCAB11-203ENST00000550103 AHNAK2Q8IVF2 5795 aa1.95□□□□□ -2.1
EFCAB11-203ENST00000550103 SYNE1Q8NF91 8797 aaKnown RBP1.94□□□□□ -2.1
EFCAB11-203ENST00000550103 KRTAP5-10Q6L8G5 202 aa1.9□□□□□ -2.11
EFCAB11-203ENST00000550103 KRTAP5-7Q6L8G8 165 aa1.9□□□□□ -2.11
EFCAB11-203ENST00000550103 KRTAP5-8O75690 187 aa1.88□□□□□ -2.11
EFCAB11-203ENST00000550103 KRTAP6-2Q3LI66 62 aa1.83□□□□□ -2.12
EFCAB11-203ENST00000550103 MUC19Q7Z5P9 8384 aa1.67□□□□□ -2.14
EFCAB11-203ENST00000550103 AHNAKQ09666 5890 aaKnown RBP1.63□□□□□ -2.15
EFCAB11-203ENST00000550103 MUC5BQ9HC84 5762 aaPredicted RBP1.6□□□□□ -2.15
EFCAB11-203ENST00000550103 MUC5ACP98088 5654 aa1.57□□□□□ -2.16
EFCAB11-203ENST00000550103 KRTAP21-2Q3LI59 83 aa1.55□□□□□ -2.16
EFCAB11-203ENST00000550103 PRM1P04553 51 aa1.5□□□□□ -2.17
EFCAB11-203ENST00000550103 PHGR1C9JFL3 82 aa1.15□□□□□ -2.23
EFCAB11-203ENST00000550103 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
EFCAB11-203ENST00000550103 KRTAP21-1Q3LI58 79 aa0.92□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 31.2 ms