RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 Q1T7F1 81 aa6.12□□□□□ -1.43
CHMP1A-208ENST00000550102 MT1MQ8N339 61 aa6.11□□□□□ -1.43
CHMP1A-208ENST00000550102 K7ERS5 55 aa6.1□□□□□ -1.43
CHMP1A-208ENST00000550102 KRTAP25-1Q3LHN0 102 aa6.03□□□□□ -1.44
CHMP1A-208ENST00000550102 KRTAP12-3P60328 96 aa6.02□□□□□ -1.45
CHMP1A-208ENST00000550102 KRTAP4-9Q9BYQ8 210 aa5.95□□□□□ -1.46
CHMP1A-208ENST00000550102 A6NED7 52 aa5.94□□□□□ -1.46
CHMP1A-208ENST00000550102 KRTAP4-3Q9BYR4 195 aa5.93□□□□□ -1.46
CHMP1A-208ENST00000550102 LCE4AQ5TA78 99 aa5.87□□□□□ -1.47
CHMP1A-208ENST00000550102 RPS28P62857 69 aaKnown RBP5.85□□□□□ -1.47
CHMP1A-208ENST00000550102 PCP4P48539 62 aa5.84□□□□□ -1.47
CHMP1A-208ENST00000550102 LCE1DQ5T752 114 aa5.84□□□□□ -1.47
CHMP1A-208ENST00000550102 GPR98Q8WXG9 6306 aa5.81□□□□□ -1.48
CHMP1A-208ENST00000550102 KRTAP4-7Q9BYR0 210 aa5.81□□□□□ -1.48
CHMP1A-208ENST00000550102 KRTAP23-1A1A580 65 aa5.78□□□□□ -1.48
CHMP1A-208ENST00000550102 MT4P47944 62 aa5.77□□□□□ -1.49
CHMP1A-208ENST00000550102 CDC42SE1Q9NRR8 79 aa5.77□□□□□ -1.49
CHMP1A-208ENST00000550102 KRTAP5-4Q6L8H1 288 aa5.76□□□□□ -1.49
CHMP1A-208ENST00000550102 HMCN1Q96RW7 5635 aa5.74□□□□□ -1.49
CHMP1A-208ENST00000550102 KRTAP19-4Q3LI73 84 aa5.68□□□□□ -1.5
CHMP1A-208ENST00000550102 ROMO1P60602 79 aa5.67□□□□□ -1.5
CHMP1A-208ENST00000550102 KRTAP15-1Q3LI76 137 aa5.65□□□□□ -1.5
CHMP1A-208ENST00000550102 KRTAP4-6Q9BYQ5 205 aa5.59□□□□□ -1.51
CHMP1A-208ENST00000550102 KRTAP5-5Q701N2 237 aaPredicted RBP5.58□□□□□ -1.52
CHMP1A-208ENST00000550102 LCE3CQ5T5A8 94 aa5.54□□□□□ -1.52
CHMP1A-208ENST00000550102 AHNAK2Q8IVF2 5795 aa5.52□□□□□ -1.53
CHMP1A-208ENST00000550102 LOC100996750A0A140TA64 210 aa5.51□□□□□ -1.53
CHMP1A-208ENST00000550102 KRTAP12-4P60329 112 aa5.43□□□□□ -1.54
CHMP1A-208ENST00000550102 KRTAP20-2Q3LI61 65 aa5.43□□□□□ -1.54
CHMP1A-208ENST00000550102 KRTAP5-10Q6L8G5 202 aa5.43□□□□□ -1.54
CHMP1A-208ENST00000550102 SPRR5A0A1B0GTR4 108 aa5.42□□□□□ -1.54
CHMP1A-208ENST00000550102 KRTAP5-3Q6L8H2 238 aa5.31□□□□□ -1.56
CHMP1A-208ENST00000550102 SYNE1Q8NF91 8797 aaKnown RBP5.27□□□□□ -1.57
CHMP1A-208ENST00000550102 MT1AP04731 61 aa5.24□□□□□ -1.57
CHMP1A-208ENST00000550102 KRTAP5-7Q6L8G8 165 aa5.24□□□□□ -1.57
CHMP1A-208ENST00000550102 KRTAP9-6A8MVA2 160 aa5.21□□□□□ -1.58
CHMP1A-208ENST00000550102 KRTAP6-1Q3LI64 71 aa5.18□□□□□ -1.58
CHMP1A-208ENST00000550102 BRK1Q8WUW1 75 aa5.18□□□□□ -1.58
CHMP1A-208ENST00000550102 KRTAP5-2Q701N4 177 aa5.07□□□□□ -1.6
CHMP1A-208ENST00000550102 KRTAP9-4Q9BYQ2 154 aa5.02□□□□□ -1.61
CHMP1A-208ENST00000550102 KRTAP6-2Q3LI66 62 aa4.95□□□□□ -1.62
CHMP1A-208ENST00000550102 KRTAP4-11Q9BYQ6 195 aa4.95□□□□□ -1.62
CHMP1A-208ENST00000550102 PMAIP1Q13794 54 aa4.85□□□□□ -1.63
CHMP1A-208ENST00000550102 MT3P25713 68 aa4.78□□□□□ -1.64
CHMP1A-208ENST00000550102 KRTAP5-8O75690 187 aa4.76□□□□□ -1.65
CHMP1A-208ENST00000550102 OBSCNQ5VST9 7968 aa4.69□□□□□ -1.66
CHMP1A-208ENST00000550102 PRAC1Q96KF2 57 aa4.66□□□□□ -1.66
CHMP1A-208ENST00000550102 KRTAP9-9Q9BYP9 154 aa4.56□□□□□ -1.68
CHMP1A-208ENST00000550102 MUC5ACP98088 5654 aa4.55□□□□□ -1.68
CHMP1A-208ENST00000550102 MUC5BQ9HC84 5762 aaPredicted RBP4.55□□□□□ -1.68
CHMP1A-208ENST00000550102 PRO0628Q9UI54 55 aa4.54□□□□□ -1.68
CHMP1A-208ENST00000550102 AHNAKQ09666 5890 aaKnown RBP4.53□□□□□ -1.68
CHMP1A-208ENST00000550102 KRTAP5-1Q6L8H4 278 aa4.51□□□□□ -1.69
CHMP1A-208ENST00000550102 LCE1EQ5T753 118 aa4.37□□□□□ -1.71
CHMP1A-208ENST00000550102 KTN1-AS1Q86SY8 53 aa4.35□□□□□ -1.71
CHMP1A-208ENST00000550102 SVIPQ8NHG7 77 aa4.2□□□□□ -1.74
CHMP1A-208ENST00000550102 LCE1BQ5T7P3 118 aa4.11□□□□□ -1.75
CHMP1A-208ENST00000550102 KRTAP4-2Q9BYR5 136 aa4.11□□□□□ -1.75
CHMP1A-208ENST00000550102 LCE1CQ5T751 118 aa4.06□□□□□ -1.76
CHMP1A-208ENST00000550102 LCE3DQ9BYE3 92 aa4.01□□□□□ -1.77
CHMP1A-208ENST00000550102 LUZP6Q538Z0 58 aa3.97□□□□□ -1.77
CHMP1A-208ENST00000550102 LCE3EQ5T5B0 92 aa3.79□□□□□ -1.8
CHMP1A-208ENST00000550102 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.71□□□□□ -1.82
CHMP1A-208ENST00000550102 KRTAP5-11Q6L8G4 156 aa3.68□□□□□ -1.82
CHMP1A-208ENST00000550102 KRTAP4-12Q9BQ66 201 aa3.68□□□□□ -1.82
CHMP1A-208ENST00000550102 LCE1FQ5T754 118 aa3.57□□□□□ -1.84
CHMP1A-208ENST00000550102 KRTAP21-2Q3LI59 83 aa3.41□□□□□ -1.86
CHMP1A-208ENST00000550102 NDUFAF8A1L188 74 aa3.19□□□□□ -1.9
CHMP1A-208ENST00000550102 PHGR1C9JFL3 82 aa3.17□□□□□ -1.9
CHMP1A-208ENST00000550102 KRTAP4-4Q9BYR3 166 aa3.1□□□□□ -1.91
CHMP1A-208ENST00000550102 PRM1P04553 51 aa2.9□□□□□ -1.95
CHMP1A-208ENST00000550102 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
CHMP1A-208ENST00000550102 INE1O15225 51 aa2.58□□□□□ -2
CHMP1A-208ENST00000550102 A0A0A0MQY5 61 aa2.54□□□□□ -2
CHMP1A-208ENST00000550102 KRTAP21-1Q3LI58 79 aa2.44□□□□□ -2.02
CHMP1A-208ENST00000550102 MUC16Q8WXI7 14507 aa2.09□□□□□ -2.07
CHMP1A-208ENST00000550102 H3BS24 57 aa2□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 71.2 ms