RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 KRTAP19-5Q3LI72 72 aa3.53□□□□□ -1.84
TRAFD1-207ENST00000550051 A0A0D9SG42 100 aa3.52□□□□□ -1.85
TRAFD1-207ENST00000550051 MT1MQ8N339 61 aa3.51□□□□□ -1.85
TRAFD1-207ENST00000550051 CHKB-CPT1BH3BT56 60 aa3.5□□□□□ -1.85
TRAFD1-207ENST00000550051 KRTAP5-7Q6L8G8 165 aa3.48□□□□□ -1.85
TRAFD1-207ENST00000550051 RPS28P62857 69 aaKnown RBP3.47□□□□□ -1.85
TRAFD1-207ENST00000550051 MT1LQ93083 61 aa3.47□□□□□ -1.85
TRAFD1-207ENST00000550051 COX7CP15954 63 aa3.45□□□□□ -1.86
TRAFD1-207ENST00000550051 LCE3CQ5T5A8 94 aa3.44□□□□□ -1.86
TRAFD1-207ENST00000550051 KRTAP4-3Q9BYR4 195 aa3.43□□□□□ -1.86
TRAFD1-207ENST00000550051 TMEM258P61165 79 aa3.42□□□□□ -1.86
TRAFD1-207ENST00000550051 LCE1EQ5T753 118 aa3.41□□□□□ -1.86
TRAFD1-207ENST00000550051 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.41□□□□□ -1.86
TRAFD1-207ENST00000550051 SERP2Q8N6R1 65 aa3.38□□□□□ -1.87
TRAFD1-207ENST00000550051 SPANXA2-OT1Q8N9U9 137 aa3.38□□□□□ -1.87
TRAFD1-207ENST00000550051 SPINT4Q6UDR6 99 aa3.36□□□□□ -1.87
TRAFD1-207ENST00000550051 KRTAP12-1P59990 96 aa3.35□□□□□ -1.87
TRAFD1-207ENST00000550051 KRTAP5-11Q6L8G4 156 aa3.35□□□□□ -1.87
TRAFD1-207ENST00000550051 SPATA8Q6RVD6 105 aa3.34□□□□□ -1.87
TRAFD1-207ENST00000550051 C10orf95Q9H7T3 257 aa3.34□□□□□ -1.87
TRAFD1-207ENST00000550051 KRTAP20-2Q3LI61 65 aa3.33□□□□□ -1.88
TRAFD1-207ENST00000550051 PRO0628Q9UI54 55 aa3.33□□□□□ -1.88
TRAFD1-207ENST00000550051 SNURFQ9Y675 71 aa3.33□□□□□ -1.88
TRAFD1-207ENST00000550051 SPRR5A0A1B0GTR4 108 aa3.32□□□□□ -1.88
TRAFD1-207ENST00000550051 SEC61GP60059 68 aa3.32□□□□□ -1.88
TRAFD1-207ENST00000550051 SERP1Q9Y6X1 66 aa3.32□□□□□ -1.88
TRAFD1-207ENST00000550051 A0A1B0GU33 70 aa3.31□□□□□ -1.88
TRAFD1-207ENST00000550051 LCE3AQ5TA76 89 aa3.31□□□□□ -1.88
TRAFD1-207ENST00000550051 H7BZZ5 65 aa3.3□□□□□ -1.88
TRAFD1-207ENST00000550051 SMIM26A0A096LP01 95 aa3.27□□□□□ -1.89
TRAFD1-207ENST00000550051 KRTAP5-5Q701N2 237 aaPredicted RBP3.27□□□□□ -1.89
TRAFD1-207ENST00000550051 TNP1P09430 55 aa3.26□□□□□ -1.89
TRAFD1-207ENST00000550051 COA5Q86WW8 74 aa3.26□□□□□ -1.89
TRAFD1-207ENST00000550051 ATP5EP56381 51 aaPredicted RBP3.25□□□□□ -1.89
TRAFD1-207ENST00000550051 KRTAP12-4P60329 112 aa3.25□□□□□ -1.89
TRAFD1-207ENST00000550051 V9GYY9 64 aa3.21□□□□□ -1.9
TRAFD1-207ENST00000550051 KRTAP12-3P60328 96 aa3.2□□□□□ -1.9
TRAFD1-207ENST00000550051 BRK1Q8WUW1 75 aa3.18□□□□□ -1.9
TRAFD1-207ENST00000550051 A8MU10 97 aa3.15□□□□□ -1.91
TRAFD1-207ENST00000550051 LCE3EQ5T5B0 92 aa3.15□□□□□ -1.91
TRAFD1-207ENST00000550051 KRTAP9-6A8MVA2 160 aa3.14□□□□□ -1.91
TRAFD1-207ENST00000550051 Q1T7F1 81 aa3.13□□□□□ -1.91
TRAFD1-207ENST00000550051 PMAIP1Q13794 54 aa3.12□□□□□ -1.91
TRAFD1-207ENST00000550051 SYNE1Q8NF91 8797 aaKnown RBP3.12□□□□□ -1.91
TRAFD1-207ENST00000550051 A0A1B0GU69 56 aa3.11□□□□□ -1.91
TRAFD1-207ENST00000550051 KRTAP5-2Q701N4 177 aa3.05□□□□□ -1.92
TRAFD1-207ENST00000550051 KTN1-AS1Q86SY8 53 aa3.04□□□□□ -1.92
TRAFD1-207ENST00000550051 PSPHP1O15172 72 aa3.03□□□□□ -1.92
TRAFD1-207ENST00000550051 KRTAP5-8O75690 187 aa3.01□□□□□ -1.93
TRAFD1-207ENST00000550051 MUC5ACP98088 5654 aa2.99□□□□□ -1.93
TRAFD1-207ENST00000550051 AHNAKQ09666 5890 aaKnown RBP2.99□□□□□ -1.93
TRAFD1-207ENST00000550051 PRR15LQ9BU68 103 aa2.97□□□□□ -1.93
TRAFD1-207ENST00000550051 KRTAP5-1Q6L8H4 278 aa2.96□□□□□ -1.94
TRAFD1-207ENST00000550051 CDC42SE1Q9NRR8 79 aa2.96□□□□□ -1.94
TRAFD1-207ENST00000550051 MT1AP04731 61 aa2.95□□□□□ -1.94
TRAFD1-207ENST00000550051 KRTAP25-1Q3LHN0 102 aa2.95□□□□□ -1.94
TRAFD1-207ENST00000550051 KRTAP6-1Q3LI64 71 aa2.94□□□□□ -1.94
TRAFD1-207ENST00000550051 LINC01558Q9Y6Z2 57 aa2.94□□□□□ -1.94
TRAFD1-207ENST00000550051 MUC5BQ9HC84 5762 aaPredicted RBP2.92□□□□□ -1.94
TRAFD1-207ENST00000550051 A6NED7 52 aa2.91□□□□□ -1.94
TRAFD1-207ENST00000550051 OBSCNQ5VST9 7968 aa2.9□□□□□ -1.95
TRAFD1-207ENST00000550051 KRTAP4-4Q9BYR3 166 aa2.87□□□□□ -1.95
TRAFD1-207ENST00000550051 KRTAP6-2Q3LI66 62 aa2.86□□□□□ -1.95
TRAFD1-207ENST00000550051 UQCR11O14957 56 aa2.85□□□□□ -1.95
TRAFD1-207ENST00000550051 K7ERS5 55 aa2.74□□□□□ -1.97
TRAFD1-207ENST00000550051 MIR22HGQ0VDD5 57 aa2.74□□□□□ -1.97
TRAFD1-207ENST00000550051 ROMO1P60602 79 aa2.64□□□□□ -1.99
TRAFD1-207ENST00000550051 LCE3DQ9BYE3 92 aa2.63□□□□□ -1.99
TRAFD1-207ENST00000550051 LCE1CQ5T751 118 aa2.4□□□□□ -2.03
TRAFD1-207ENST00000550051 LCE1BQ5T7P3 118 aa2.4□□□□□ -2.03
TRAFD1-207ENST00000550051 LUZP6Q538Z0 58 aa2.28□□□□□ -2.04
TRAFD1-207ENST00000550051 PHGR1C9JFL3 82 aa2.07□□□□□ -2.08
TRAFD1-207ENST00000550051 INE1O15225 51 aa1.99□□□□□ -2.09
TRAFD1-207ENST00000550051 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
TRAFD1-207ENST00000550051 MUC19Q7Z5P9 8384 aa1.88□□□□□ -2.11
TRAFD1-207ENST00000550051 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.15
TRAFD1-207ENST00000550051 PRM1P04553 51 aa1.35□□□□□ -2.19
TRAFD1-207ENST00000550051 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 142.8 ms