RNA–Protein interactions for RNA: ENST00000549872.5

CHPT1-205, Transcript of choline phosphotransferase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHPT1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-205ENST00000549872 MUC12Q9UKN1 5478 aa9.42□□□□□ -0.9
CHPT1-205ENST00000549872 LCE3CQ5T5A8 94 aa9.39□□□□□ -0.91
CHPT1-205ENST00000549872 KRTAP4-7Q9BYR0 210 aa9.27□□□□□ -0.92
CHPT1-205ENST00000549872 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.25□□□□□ -0.93
CHPT1-205ENST00000549872 KRTAP19-3Q7Z4W3 81 aa9.24□□□□□ -0.93
CHPT1-205ENST00000549872 KRTAP5-9P26371 169 aa9.23□□□□□ -0.93
CHPT1-205ENST00000549872 KRTAP19-4Q3LI73 84 aa9.22□□□□□ -0.93
CHPT1-205ENST00000549872 MT1GP13640 62 aa9.14□□□□□ -0.95
CHPT1-205ENST00000549872 MT1MQ8N339 61 aa9.08□□□□□ -0.96
CHPT1-205ENST00000549872 LCE5AQ5TCM9 118 aa9.07□□□□□ -0.96
CHPT1-205ENST00000549872 MDN1Q9NU22 5596 aa9.04□□□□□ -0.96
CHPT1-205ENST00000549872 KRTAP6-3Q3LI67 103 aa9.02□□□□□ -0.97
CHPT1-205ENST00000549872 KRTAP4-3Q9BYR4 195 aa9□□□□□ -0.97
CHPT1-205ENST00000549872 LCE1AQ5T7P2 110 aa8.98□□□□□ -0.97
CHPT1-205ENST00000549872 KRTAP9-6A8MVA2 160 aa8.95□□□□□ -0.98
CHPT1-205ENST00000549872 SPRR2EP22531 72 aa8.91□□□□□ -0.98
CHPT1-205ENST00000549872 SPRR2BP35325 72 aa8.91□□□□□ -0.98
CHPT1-205ENST00000549872 SPRR2AP35326 72 aa8.91□□□□□ -0.98
CHPT1-205ENST00000549872 INE1O15225 51 aa8.76□□□□□ -1.01
CHPT1-205ENST00000549872 DSTQ03001 7570 aaKnown RBP8.72□□□□□ -1.01
CHPT1-205ENST00000549872 LOC100996750A0A140TA64 210 aa8.7□□□□□ -1.02
CHPT1-205ENST00000549872 KRTAP9-7A8MTY7 169 aa8.7□□□□□ -1.02
CHPT1-205ENST00000549872 SPRR2DP22532 72 aa8.57□□□□□ -1.04
CHPT1-205ENST00000549872 NEBP20929 6669 aa8.46□□□□□ -1.06
CHPT1-205ENST00000549872 LCE3BQ5TA77 95 aa8.22□□□□□ -1.09
CHPT1-205ENST00000549872 KRTAP2-3P0C7H8 128 aa8.22□□□□□ -1.09
CHPT1-205ENST00000549872 KRTAP2-4Q9BYR9 128 aa8.22□□□□□ -1.09
CHPT1-205ENST00000549872 KRTAP2-1Q9BYU5 128 aa8.22□□□□□ -1.09
CHPT1-205ENST00000549872 KRTAP5-5Q701N2 237 aaPredicted RBP8.16□□□□□ -1.1
CHPT1-205ENST00000549872 MT1AP04731 61 aa8.01□□□□□ -1.13
CHPT1-205ENST00000549872 KRTAP6-1Q3LI64 71 aa8□□□□□ -1.13
CHPT1-205ENST00000549872 SYNE1Q8NF91 8797 aaKnown RBP7.76□□□□□ -1.17
CHPT1-205ENST00000549872 KRTAP5-4Q6L8H1 288 aa7.73□□□□□ -1.17
CHPT1-205ENST00000549872 KRTAP20-1Q3LI63 56 aa7.71□□□□□ -1.17
CHPT1-205ENST00000549872 KRTAP2-2Q9BYT5 123 aa7.71□□□□□ -1.17
CHPT1-205ENST00000549872 KRTAP9-4Q9BYQ2 154 aa7.62□□□□□ -1.19
CHPT1-205ENST00000549872 KRTAP12-4P60329 112 aa7.54□□□□□ -1.2
CHPT1-205ENST00000549872 LCE4AQ5TA78 99 aa7.54□□□□□ -1.2
CHPT1-205ENST00000549872 MT4P47944 62 aa7.49□□□□□ -1.21
CHPT1-205ENST00000549872 KRTAP4-6Q9BYQ5 205 aa7.44□□□□□ -1.22
CHPT1-205ENST00000549872 KRTAP4-9Q9BYQ8 210 aa7.42□□□□□ -1.22
CHPT1-205ENST00000549872 KRTAP6-2Q3LI66 62 aa7.36□□□□□ -1.23
CHPT1-205ENST00000549872 LCE1DQ5T752 114 aa7.32□□□□□ -1.24
CHPT1-205ENST00000549872 HMCN1Q96RW7 5635 aa7.27□□□□□ -1.25
CHPT1-205ENST00000549872 KRTAP20-2Q3LI61 65 aa7.25□□□□□ -1.25
CHPT1-205ENST00000549872 MT3P25713 68 aa7.24□□□□□ -1.25
CHPT1-205ENST00000549872 LCE3DQ9BYE3 92 aa7.06□□□□□ -1.28
CHPT1-205ENST00000549872 KRTAP5-2Q701N4 177 aa7.03□□□□□ -1.28
CHPT1-205ENST00000549872 KRTAP5-3Q6L8H2 238 aa6.98□□□□□ -1.29
CHPT1-205ENST00000549872 LCE3EQ5T5B0 92 aa6.86□□□□□ -1.31
CHPT1-205ENST00000549872 OBSCNQ5VST9 7968 aa6.83□□□□□ -1.32
CHPT1-205ENST00000549872 AHNAK2Q8IVF2 5795 aa6.37□□□□□ -1.39
CHPT1-205ENST00000549872 KRTAP4-11Q9BYQ6 195 aa6.26□□□□□ -1.41
CHPT1-205ENST00000549872 LCE1EQ5T753 118 aa6.24□□□□□ -1.41
CHPT1-205ENST00000549872 KRTAP5-1Q6L8H4 278 aa6.09□□□□□ -1.43
CHPT1-205ENST00000549872 PRM1P04553 51 aa6.09□□□□□ -1.43
CHPT1-205ENST00000549872 KRTAP5-8O75690 187 aa6.03□□□□□ -1.44
CHPT1-205ENST00000549872 KRTAP5-10Q6L8G5 202 aa5.99□□□□□ -1.45
CHPT1-205ENST00000549872 LCE1BQ5T7P3 118 aa5.96□□□□□ -1.45
CHPT1-205ENST00000549872 MUC5ACP98088 5654 aa5.93□□□□□ -1.46
CHPT1-205ENST00000549872 KRTAP4-2Q9BYR5 136 aa5.87□□□□□ -1.47
CHPT1-205ENST00000549872 LCE1CQ5T751 118 aa5.84□□□□□ -1.48
CHPT1-205ENST00000549872 KRTAP5-7Q6L8G8 165 aa5.81□□□□□ -1.48
CHPT1-205ENST00000549872 GPR98Q8WXG9 6306 aa5.68□□□□□ -1.5
CHPT1-205ENST00000549872 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.45□□□□□ -1.54
CHPT1-205ENST00000549872 KRTAP9-9Q9BYP9 154 aa5.4□□□□□ -1.55
CHPT1-205ENST00000549872 MUC5BQ9HC84 5762 aaPredicted RBP5.24□□□□□ -1.57
CHPT1-205ENST00000549872 KRTAP21-2Q3LI59 83 aa5.22□□□□□ -1.57
CHPT1-205ENST00000549872 KRTAP5-11Q6L8G4 156 aa5.13□□□□□ -1.59
CHPT1-205ENST00000549872 KRTAP4-12Q9BQ66 201 aa4.94□□□□□ -1.62
CHPT1-205ENST00000549872 AHNAKQ09666 5890 aaKnown RBP4.76□□□□□ -1.65
CHPT1-205ENST00000549872 KRTAP4-4Q9BYR3 166 aa4.72□□□□□ -1.65
CHPT1-205ENST00000549872 LCE1FQ5T754 118 aa4.56□□□□□ -1.68
CHPT1-205ENST00000549872 PHGR1C9JFL3 82 aa4.43□□□□□ -1.7
CHPT1-205ENST00000549872 MUC19Q7Z5P9 8384 aa4.05□□□□□ -1.76
CHPT1-205ENST00000549872 KRTAP21-1Q3LI58 79 aa3.95□□□□□ -1.78
CHPT1-205ENST00000549872 MUC16Q8WXI7 14507 aa2.85□□□□□ -1.95
Retrieved 77 of 20,778 RNA–protein pairs in 12.3 ms