RNA–Protein interactions for RNA: ENST00000549718.5

LINC00661-205, long intergenic non-protein coding RNA 661, humanhuman

TSL 4

Gene LINC00661, Length 569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-205ENST00000549718 KRTAP4-3Q9BYR4 195 aa5.62□□□□□ -1.51
LINC00661-205ENST00000549718 ATP5EP56381 51 aaPredicted RBP5.59□□□□□ -1.51
LINC00661-205ENST00000549718 HMCN1Q96RW7 5635 aa5.58□□□□□ -1.52
LINC00661-205ENST00000549718 LINC01558Q9Y6Z2 57 aa5.54□□□□□ -1.52
LINC00661-205ENST00000549718 KRTAP5-4Q6L8H1 288 aa5.53□□□□□ -1.52
LINC00661-205ENST00000549718 KRTAP12-3P60328 96 aa5.49□□□□□ -1.53
LINC00661-205ENST00000549718 KRTAP4-7Q9BYR0 210 aa5.46□□□□□ -1.54
LINC00661-205ENST00000549718 UQCR11O14957 56 aa5.44□□□□□ -1.54
LINC00661-205ENST00000549718 KRTAP4-6Q9BYQ5 205 aa5.44□□□□□ -1.54
LINC00661-205ENST00000549718 AHNAK2Q8IVF2 5795 aa5.42□□□□□ -1.54
LINC00661-205ENST00000549718 TMEM258P61165 79 aa5.4□□□□□ -1.54
LINC00661-205ENST00000549718 KRTAP5-10Q6L8G5 202 aa5.34□□□□□ -1.55
LINC00661-205ENST00000549718 KRTAP25-1Q3LHN0 102 aa5.31□□□□□ -1.56
LINC00661-205ENST00000549718 MIR22HGQ0VDD5 57 aa5.3□□□□□ -1.56
LINC00661-205ENST00000549718 KRTAP5-5Q701N2 237 aaPredicted RBP5.28□□□□□ -1.56
LINC00661-205ENST00000549718 KRTAP20-2Q3LI61 65 aa5.24□□□□□ -1.57
LINC00661-205ENST00000549718 K7ERS5 55 aa5.22□□□□□ -1.57
LINC00661-205ENST00000549718 KRTAP5-3Q6L8H2 238 aa5.2□□□□□ -1.58
LINC00661-205ENST00000549718 SPRR5A0A1B0GTR4 108 aa5.19□□□□□ -1.58
LINC00661-205ENST00000549718 LOC100996750A0A140TA64 210 aa5.18□□□□□ -1.58
LINC00661-205ENST00000549718 PCP4P48539 62 aa5.16□□□□□ -1.58
LINC00661-205ENST00000549718 PSPHP1O15172 72 aa5.15□□□□□ -1.59
LINC00661-205ENST00000549718 KRTAP12-4P60329 112 aa5.15□□□□□ -1.59
LINC00661-205ENST00000549718 KRTAP5-7Q6L8G8 165 aa5.14□□□□□ -1.59
LINC00661-205ENST00000549718 KRTAP19-4Q3LI73 84 aa5.13□□□□□ -1.59
LINC00661-205ENST00000549718 SVIPQ8NHG7 77 aa5.12□□□□□ -1.59
LINC00661-205ENST00000549718 V9GYY9 64 aa5.12□□□□□ -1.59
LINC00661-205ENST00000549718 KRTAP23-1A1A580 65 aa5.09□□□□□ -1.59
LINC00661-205ENST00000549718 KRTAP15-1Q3LI76 137 aa5.08□□□□□ -1.6
LINC00661-205ENST00000549718 SYNE1Q8NF91 8797 aaKnown RBP5.08□□□□□ -1.6
LINC00661-205ENST00000549718 Q1T7F1 81 aa5.07□□□□□ -1.6
LINC00661-205ENST00000549718 LCE3CQ5T5A8 94 aa5.03□□□□□ -1.6
LINC00661-205ENST00000549718 A6NED7 52 aa4.97□□□□□ -1.61
LINC00661-205ENST00000549718 CDC42SE1Q9NRR8 79 aa4.94□□□□□ -1.62
LINC00661-205ENST00000549718 RPS28P62857 69 aaKnown RBP4.9□□□□□ -1.63
LINC00661-205ENST00000549718 MT1AP04731 61 aa4.89□□□□□ -1.63
LINC00661-205ENST00000549718 KRTAP6-1Q3LI64 71 aa4.86□□□□□ -1.63
LINC00661-205ENST00000549718 ROMO1P60602 79 aa4.85□□□□□ -1.63
LINC00661-205ENST00000549718 KRTAP5-2Q701N4 177 aa4.83□□□□□ -1.64
LINC00661-205ENST00000549718 KRTAP4-11Q9BYQ6 195 aa4.79□□□□□ -1.64
LINC00661-205ENST00000549718 KRTAP9-6A8MVA2 160 aa4.77□□□□□ -1.65
LINC00661-205ENST00000549718 KRTAP9-4Q9BYQ2 154 aa4.71□□□□□ -1.66
LINC00661-205ENST00000549718 KRTAP6-2Q3LI66 62 aa4.67□□□□□ -1.66
LINC00661-205ENST00000549718 KRTAP5-8O75690 187 aa4.65□□□□□ -1.67
LINC00661-205ENST00000549718 OBSCNQ5VST9 7968 aa4.58□□□□□ -1.68
LINC00661-205ENST00000549718 MUC5ACP98088 5654 aa4.48□□□□□ -1.69
LINC00661-205ENST00000549718 MT3P25713 68 aa4.46□□□□□ -1.7
LINC00661-205ENST00000549718 AHNAKQ09666 5890 aaKnown RBP4.46□□□□□ -1.7
LINC00661-205ENST00000549718 MUC5BQ9HC84 5762 aaPredicted RBP4.46□□□□□ -1.7
LINC00661-205ENST00000549718 KRTAP9-9Q9BYP9 154 aa4.41□□□□□ -1.7
LINC00661-205ENST00000549718 BRK1Q8WUW1 75 aa4.38□□□□□ -1.71
LINC00661-205ENST00000549718 KRTAP5-1Q6L8H4 278 aa4.35□□□□□ -1.71
LINC00661-205ENST00000549718 PMAIP1Q13794 54 aa4.11□□□□□ -1.75
LINC00661-205ENST00000549718 LCE1EQ5T753 118 aa4.11□□□□□ -1.75
LINC00661-205ENST00000549718 PRO0628Q9UI54 55 aa4.06□□□□□ -1.76
LINC00661-205ENST00000549718 PRAC1Q96KF2 57 aa3.94□□□□□ -1.78
LINC00661-205ENST00000549718 KRTAP4-2Q9BYR5 136 aa3.92□□□□□ -1.78
LINC00661-205ENST00000549718 LCE1BQ5T7P3 118 aa3.9□□□□□ -1.79
LINC00661-205ENST00000549718 KTN1-AS1Q86SY8 53 aa3.83□□□□□ -1.8
LINC00661-205ENST00000549718 LCE1CQ5T751 118 aa3.82□□□□□ -1.8
LINC00661-205ENST00000549718 H3BS24 57 aa3.74□□□□□ -1.81
LINC00661-205ENST00000549718 A0A0A0MQY5 61 aa3.65□□□□□ -1.83
LINC00661-205ENST00000549718 LCE3DQ9BYE3 92 aa3.6□□□□□ -1.83
LINC00661-205ENST00000549718 KRTAP4-12Q9BQ66 201 aa3.58□□□□□ -1.84
LINC00661-205ENST00000549718 KRTAP5-11Q6L8G4 156 aa3.49□□□□□ -1.85
LINC00661-205ENST00000549718 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.47□□□□□ -1.85
LINC00661-205ENST00000549718 LCE1FQ5T754 118 aa3.39□□□□□ -1.87
LINC00661-205ENST00000549718 LCE3EQ5T5B0 92 aa3.37□□□□□ -1.87
LINC00661-205ENST00000549718 LUZP6Q538Z0 58 aa3.23□□□□□ -1.89
LINC00661-205ENST00000549718 KRTAP21-2Q3LI59 83 aa3.2□□□□□ -1.9
LINC00661-205ENST00000549718 PHGR1C9JFL3 82 aa3.12□□□□□ -1.91
LINC00661-205ENST00000549718 KRTAP4-4Q9BYR3 166 aa2.96□□□□□ -1.94
LINC00661-205ENST00000549718 NDUFAF8A1L188 74 aa2.9□□□□□ -1.95
LINC00661-205ENST00000549718 MUC19Q7Z5P9 8384 aa2.84□□□□□ -1.96
LINC00661-205ENST00000549718 PRM1P04553 51 aa2.48□□□□□ -2.01
LINC00661-205ENST00000549718 KRTAP21-1Q3LI58 79 aa2.36□□□□□ -2.03
LINC00661-205ENST00000549718 INE1O15225 51 aa2.34□□□□□ -2.03
LINC00661-205ENST00000549718 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 90.5 ms