RNA–Protein interactions for RNA: ENST00000549340.5

LETMD1-218, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 818 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-218ENST00000549340 KRTAP15-1Q3LI76 137 aa5.71□□□□□ -1.5
LETMD1-218ENST00000549340 USH2AO75445 5202 aa5.7□□□□□ -1.5
LETMD1-218ENST00000549340 KRTAP19-6Q3LI70 58 aa5.69□□□□□ -1.5
LETMD1-218ENST00000549340 SYNE2Q8WXH0 6885 aaKnown RBP5.64□□□□□ -1.51
LETMD1-218ENST00000549340 KRTAP12-3P60328 96 aa5.58□□□□□ -1.52
LETMD1-218ENST00000549340 MACF1Q9UPN3 7388 aaKnown RBP5.57□□□□□ -1.52
LETMD1-218ENST00000549340 FCGBPQ9Y6R7 5405 aaPredicted RBP5.55□□□□□ -1.52
LETMD1-218ENST00000549340 SSPOA2VEC9 5147 aa5.55□□□□□ -1.52
LETMD1-218ENST00000549340 SPRR5A0A1B0GTR4 108 aa5.47□□□□□ -1.53
LETMD1-218ENST00000549340 KRTAP19-5Q3LI72 72 aa5.47□□□□□ -1.53
LETMD1-218ENST00000549340 NEBP20929 6669 aa5.39□□□□□ -1.55
LETMD1-218ENST00000549340 KRTAP19-7Q3SYF9 63 aa5.37□□□□□ -1.55
LETMD1-218ENST00000549340 KRTAP20-1Q3LI63 56 aa5.36□□□□□ -1.55
LETMD1-218ENST00000549340 KRTAP6-3Q3LI67 103 aa5.36□□□□□ -1.55
LETMD1-218ENST00000549340 LUZP6Q538Z0 58 aa5.34□□□□□ -1.55
LETMD1-218ENST00000549340 NDUFAF8A1L188 74 aa5.29□□□□□ -1.56
LETMD1-218ENST00000549340 MT1EP04732 61 aa5.27□□□□□ -1.57
LETMD1-218ENST00000549340 LCE3CQ5T5A8 94 aa5.23□□□□□ -1.57
LETMD1-218ENST00000549340 KMT2DO14686 5537 aa5.21□□□□□ -1.58
LETMD1-218ENST00000549340 MT1LQ93083 61 aa5.2□□□□□ -1.58
LETMD1-218ENST00000549340 MUC12Q9UKN1 5478 aa5.16□□□□□ -1.58
LETMD1-218ENST00000549340 KRTAP19-3Q7Z4W3 81 aa5.05□□□□□ -1.6
LETMD1-218ENST00000549340 MT1GP13640 62 aa5.03□□□□□ -1.6
LETMD1-218ENST00000549340 SPRR2FQ96RM1 72 aa5.02□□□□□ -1.61
LETMD1-218ENST00000549340 KRTAP2-3P0C7H8 128 aa4.99□□□□□ -1.61
LETMD1-218ENST00000549340 KRTAP2-4Q9BYR9 128 aa4.99□□□□□ -1.61
LETMD1-218ENST00000549340 KRTAP5-9P26371 169 aa4.96□□□□□ -1.62
LETMD1-218ENST00000549340 MT1MQ8N339 61 aa4.96□□□□□ -1.62
LETMD1-218ENST00000549340 GPR98Q8WXG9 6306 aa4.95□□□□□ -1.62
LETMD1-218ENST00000549340 KRTAP9-6A8MVA2 160 aa4.92□□□□□ -1.62
LETMD1-218ENST00000549340 MDN1Q9NU22 5596 aa4.9□□□□□ -1.62
LETMD1-218ENST00000549340 LCE1AQ5T7P2 110 aa4.8□□□□□ -1.64
LETMD1-218ENST00000549340 KRTAP4-3Q9BYR4 195 aa4.8□□□□□ -1.64
LETMD1-218ENST00000549340 KRTAP2-2Q9BYT5 123 aa4.79□□□□□ -1.64
LETMD1-218ENST00000549340 KRTAP2-1Q9BYU5 128 aa4.79□□□□□ -1.64
LETMD1-218ENST00000549340 A0A0A0MQY5 61 aa4.76□□□□□ -1.65
LETMD1-218ENST00000549340 SPRR2EP22531 72 aa4.73□□□□□ -1.65
LETMD1-218ENST00000549340 SPRR2BP35325 72 aa4.73□□□□□ -1.65
LETMD1-218ENST00000549340 SPRR2AP35326 72 aa4.73□□□□□ -1.65
LETMD1-218ENST00000549340 SPRR2DP22532 72 aa4.55□□□□□ -1.68
LETMD1-218ENST00000549340 INE1O15225 51 aa4.46□□□□□ -1.7
LETMD1-218ENST00000549340 KRTAP5-5Q701N2 237 aaPredicted RBP4.46□□□□□ -1.7
LETMD1-218ENST00000549340 MT1AP04731 61 aa4.45□□□□□ -1.7
LETMD1-218ENST00000549340 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.45□□□□□ -1.7
LETMD1-218ENST00000549340 DSTQ03001 7570 aaKnown RBP4.36□□□□□ -1.71
LETMD1-218ENST00000549340 KRTAP6-1Q3LI64 71 aa4.36□□□□□ -1.71
LETMD1-218ENST00000549340 AHNAK2Q8IVF2 5795 aa4.22□□□□□ -1.73
LETMD1-218ENST00000549340 KRTAP5-11Q6L8G4 156 aa4.21□□□□□ -1.74
LETMD1-218ENST00000549340 KRTAP5-4Q6L8H1 288 aa4.2□□□□□ -1.74
LETMD1-218ENST00000549340 HMCN1Q96RW7 5635 aa4.18□□□□□ -1.74
LETMD1-218ENST00000549340 KRTAP5-10Q6L8G5 202 aa4.17□□□□□ -1.74
LETMD1-218ENST00000549340 KRTAP5-7Q6L8G8 165 aa4.12□□□□□ -1.75
LETMD1-218ENST00000549340 KRTAP12-4P60329 112 aa4.1□□□□□ -1.75
LETMD1-218ENST00000549340 SYNE1Q8NF91 8797 aaKnown RBP4.09□□□□□ -1.75
LETMD1-218ENST00000549340 MT3P25713 68 aa4.02□□□□□ -1.77
LETMD1-218ENST00000549340 MT4P47944 62 aa3.98□□□□□ -1.77
LETMD1-218ENST00000549340 KRTAP6-2Q3LI66 62 aa3.97□□□□□ -1.77
LETMD1-218ENST00000549340 LCE3DQ9BYE3 92 aa3.96□□□□□ -1.78
LETMD1-218ENST00000549340 KRTAP20-2Q3LI61 65 aa3.89□□□□□ -1.79
LETMD1-218ENST00000549340 LCE1EQ5T753 118 aa3.89□□□□□ -1.79
LETMD1-218ENST00000549340 LCE3EQ5T5B0 92 aa3.88□□□□□ -1.79
LETMD1-218ENST00000549340 LCE1FQ5T754 118 aa3.85□□□□□ -1.79
LETMD1-218ENST00000549340 KRTAP5-2Q701N4 177 aa3.84□□□□□ -1.79
LETMD1-218ENST00000549340 KRTAP5-1Q6L8H4 278 aa3.81□□□□□ -1.8
LETMD1-218ENST00000549340 AHNAKQ09666 5890 aaKnown RBP3.74□□□□□ -1.81
LETMD1-218ENST00000549340 KRTAP4-4Q9BYR3 166 aa3.69□□□□□ -1.82
LETMD1-218ENST00000549340 MUC5ACP98088 5654 aa3.62□□□□□ -1.83
LETMD1-218ENST00000549340 MUC5BQ9HC84 5762 aaPredicted RBP3.56□□□□□ -1.84
LETMD1-218ENST00000549340 OBSCNQ5VST9 7968 aa3.55□□□□□ -1.84
LETMD1-218ENST00000549340 PRM1P04553 51 aa3.44□□□□□ -1.86
LETMD1-218ENST00000549340 KRTAP5-8O75690 187 aa3.36□□□□□ -1.87
LETMD1-218ENST00000549340 LCE1CQ5T751 118 aa3.21□□□□□ -1.9
LETMD1-218ENST00000549340 LCE1BQ5T7P3 118 aa3.21□□□□□ -1.9
LETMD1-218ENST00000549340 KRTAP21-2Q3LI59 83 aa2.86□□□□□ -1.95
LETMD1-218ENST00000549340 PHGR1C9JFL3 82 aa2.51□□□□□ -2.01
LETMD1-218ENST00000549340 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.06
LETMD1-218ENST00000549340 KRTAP21-1Q3LI58 79 aa2.16□□□□□ -2.06
LETMD1-218ENST00000549340 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 12.7 ms