RNA–Protein interactions for RNA: ENST00000549340.5

LETMD1-218, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 818 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-218ENST00000549340 KRTAP15-1Q3LI76 137 aa5.71□□□□□ -1.5
LETMD1-218ENST00000549340 USH2AO75445 5202 aa5.7□□□□□ -1.5
LETMD1-218ENST00000549340 KRTAP19-6Q3LI70 58 aa5.69□□□□□ -1.5
LETMD1-218ENST00000549340 SYNE2Q8WXH0 6885 aaKnown RBP5.64□□□□□ -1.51
LETMD1-218ENST00000549340 KRTAP12-3P60328 96 aa5.58□□□□□ -1.52
LETMD1-218ENST00000549340 MACF1Q9UPN3 7388 aaKnown RBP5.57□□□□□ -1.52
LETMD1-218ENST00000549340 FCGBPQ9Y6R7 5405 aaPredicted RBP5.55□□□□□ -1.52
LETMD1-218ENST00000549340 SSPOA2VEC9 5147 aa5.55□□□□□ -1.52
LETMD1-218ENST00000549340 SPRR5A0A1B0GTR4 108 aa5.47□□□□□ -1.53
LETMD1-218ENST00000549340 KRTAP19-5Q3LI72 72 aa5.47□□□□□ -1.53
LETMD1-218ENST00000549340 NEBP20929 6669 aa5.39□□□□□ -1.55
LETMD1-218ENST00000549340 KRTAP19-7Q3SYF9 63 aa5.37□□□□□ -1.55
LETMD1-218ENST00000549340 KRTAP20-1Q3LI63 56 aa5.36□□□□□ -1.55
LETMD1-218ENST00000549340 KRTAP6-3Q3LI67 103 aa5.36□□□□□ -1.55
LETMD1-218ENST00000549340 LUZP6Q538Z0 58 aa5.34□□□□□ -1.55
LETMD1-218ENST00000549340 NDUFAF8A1L188 74 aa5.29□□□□□ -1.56
LETMD1-218ENST00000549340 MT1EP04732 61 aa5.27□□□□□ -1.57
LETMD1-218ENST00000549340 LCE3CQ5T5A8 94 aa5.23□□□□□ -1.57
LETMD1-218ENST00000549340 KMT2DO14686 5537 aa5.21□□□□□ -1.58
LETMD1-218ENST00000549340 MT1LQ93083 61 aa5.2□□□□□ -1.58
LETMD1-218ENST00000549340 MUC12Q9UKN1 5478 aa5.16□□□□□ -1.58
LETMD1-218ENST00000549340 KRTAP19-3Q7Z4W3 81 aa5.05□□□□□ -1.6
LETMD1-218ENST00000549340 MT1GP13640 62 aa5.03□□□□□ -1.6
LETMD1-218ENST00000549340 SPRR2FQ96RM1 72 aa5.02□□□□□ -1.61
LETMD1-218ENST00000549340 KRTAP2-3P0C7H8 128 aa4.99□□□□□ -1.61
LETMD1-218ENST00000549340 KRTAP2-4Q9BYR9 128 aa4.99□□□□□ -1.61
LETMD1-218ENST00000549340 KRTAP5-9P26371 169 aa4.96□□□□□ -1.62
LETMD1-218ENST00000549340 MT1MQ8N339 61 aa4.96□□□□□ -1.62
LETMD1-218ENST00000549340 GPR98Q8WXG9 6306 aa4.95□□□□□ -1.62
LETMD1-218ENST00000549340 KRTAP9-6A8MVA2 160 aa4.92□□□□□ -1.62
LETMD1-218ENST00000549340 MDN1Q9NU22 5596 aa4.9□□□□□ -1.62
LETMD1-218ENST00000549340 LCE1AQ5T7P2 110 aa4.8□□□□□ -1.64
LETMD1-218ENST00000549340 KRTAP4-3Q9BYR4 195 aa4.8□□□□□ -1.64
LETMD1-218ENST00000549340 KRTAP2-2Q9BYT5 123 aa4.79□□□□□ -1.64
LETMD1-218ENST00000549340 KRTAP2-1Q9BYU5 128 aa4.79□□□□□ -1.64
LETMD1-218ENST00000549340 A0A0A0MQY5 61 aa4.76□□□□□ -1.65
LETMD1-218ENST00000549340 SPRR2EP22531 72 aa4.73□□□□□ -1.65
LETMD1-218ENST00000549340 SPRR2BP35325 72 aa4.73□□□□□ -1.65
LETMD1-218ENST00000549340 SPRR2AP35326 72 aa4.73□□□□□ -1.65
LETMD1-218ENST00000549340 SPRR2DP22532 72 aa4.55□□□□□ -1.68
LETMD1-218ENST00000549340 INE1O15225 51 aa4.46□□□□□ -1.7
LETMD1-218ENST00000549340 KRTAP5-5Q701N2 237 aaPredicted RBP4.46□□□□□ -1.7
LETMD1-218ENST00000549340 MT1AP04731 61 aa4.45□□□□□ -1.7
LETMD1-218ENST00000549340 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.45□□□□□ -1.7
LETMD1-218ENST00000549340 DSTQ03001 7570 aaKnown RBP4.36□□□□□ -1.71
LETMD1-218ENST00000549340 KRTAP6-1Q3LI64 71 aa4.36□□□□□ -1.71
LETMD1-218ENST00000549340 AHNAK2Q8IVF2 5795 aa4.22□□□□□ -1.73
LETMD1-218ENST00000549340 KRTAP5-11Q6L8G4 156 aa4.21□□□□□ -1.74
LETMD1-218ENST00000549340 KRTAP5-4Q6L8H1 288 aa4.2□□□□□ -1.74
LETMD1-218ENST00000549340 HMCN1Q96RW7 5635 aa4.18□□□□□ -1.74
LETMD1-218ENST00000549340 KRTAP5-10Q6L8G5 202 aa4.17□□□□□ -1.74
LETMD1-218ENST00000549340 KRTAP5-7Q6L8G8 165 aa4.12□□□□□ -1.75
LETMD1-218ENST00000549340 KRTAP12-4P60329 112 aa4.1□□□□□ -1.75
LETMD1-218ENST00000549340 SYNE1Q8NF91 8797 aaKnown RBP4.09□□□□□ -1.75
LETMD1-218ENST00000549340 MT3P25713 68 aa4.02□□□□□ -1.77
LETMD1-218ENST00000549340 MT4P47944 62 aa3.98□□□□□ -1.77
LETMD1-218ENST00000549340 KRTAP6-2Q3LI66 62 aa3.97□□□□□ -1.77
LETMD1-218ENST00000549340 LCE3DQ9BYE3 92 aa3.96□□□□□ -1.78
LETMD1-218ENST00000549340 KRTAP20-2Q3LI61 65 aa3.89□□□□□ -1.79
LETMD1-218ENST00000549340 LCE1EQ5T753 118 aa3.89□□□□□ -1.79
LETMD1-218ENST00000549340 LCE3EQ5T5B0 92 aa3.88□□□□□ -1.79
LETMD1-218ENST00000549340 LCE1FQ5T754 118 aa3.85□□□□□ -1.79
LETMD1-218ENST00000549340 KRTAP5-2Q701N4 177 aa3.84□□□□□ -1.79
LETMD1-218ENST00000549340 KRTAP5-1Q6L8H4 278 aa3.81□□□□□ -1.8
LETMD1-218ENST00000549340 AHNAKQ09666 5890 aaKnown RBP3.74□□□□□ -1.81
LETMD1-218ENST00000549340 KRTAP4-4Q9BYR3 166 aa3.69□□□□□ -1.82
LETMD1-218ENST00000549340 MUC5ACP98088 5654 aa3.62□□□□□ -1.83
LETMD1-218ENST00000549340 MUC5BQ9HC84 5762 aaPredicted RBP3.56□□□□□ -1.84
LETMD1-218ENST00000549340 OBSCNQ5VST9 7968 aa3.55□□□□□ -1.84
LETMD1-218ENST00000549340 PRM1P04553 51 aa3.44□□□□□ -1.86
LETMD1-218ENST00000549340 KRTAP5-8O75690 187 aa3.36□□□□□ -1.87
LETMD1-218ENST00000549340 LCE1CQ5T751 118 aa3.21□□□□□ -1.9
LETMD1-218ENST00000549340 LCE1BQ5T7P3 118 aa3.21□□□□□ -1.9
LETMD1-218ENST00000549340 KRTAP21-2Q3LI59 83 aa2.86□□□□□ -1.95
LETMD1-218ENST00000549340 PHGR1C9JFL3 82 aa2.51□□□□□ -2.01
LETMD1-218ENST00000549340 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.06
LETMD1-218ENST00000549340 KRTAP21-1Q3LI58 79 aa2.16□□□□□ -2.06
LETMD1-218ENST00000549340 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 12.2 ms