RNA–Protein interactions for RNA: ENST00000549205.1

ERBB3-208, Transcript of erb-b2 receptor tyrosine kinase 3, human

TSL 5

Gene ERBB3, Length 971 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB3-208	ENST00000549205	NEB	P20929	6669 aa		4.48	□□□□□ -1.69
ERBB3-208	ENST00000549205	SPRR2E	P22531	72 aa		4.37	□□□□□ -1.71
ERBB3-208	ENST00000549205	SPRR2B	P35325	72 aa		4.37	□□□□□ -1.71
ERBB3-208	ENST00000549205	SPRR2A	P35326	72 aa		4.37	□□□□□ -1.71
ERBB3-208	ENST00000549205	KRTAP15-1	Q3LI76	137 aa		4.37	□□□□□ -1.71
ERBB3-208	ENST00000549205	LCE1A	Q5T7P2	110 aa		4.37	□□□□□ -1.71
ERBB3-208	ENST00000549205	MT1L	Q93083	61 aa		4.37	□□□□□ -1.71
ERBB3-208	ENST00000549205	KRTAP19-3	Q7Z4W3	81 aa		4.35	□□□□□ -1.71
ERBB3-208	ENST00000549205	LCE5A	Q5TCM9	118 aa		4.31	□□□□□ -1.72
ERBB3-208	ENST00000549205	MT1G	P13640	62 aa		4.3	□□□□□ -1.72
ERBB3-208	ENST00000549205	KRTAP19-4	Q3LI73	84 aa		4.27	□□□□□ -1.73
ERBB3-208	ENST00000549205	MT1M	Q8N339	61 aa		4.25	□□□□□ -1.73
ERBB3-208	ENST00000549205	SPRR2D	P22532	72 aa		4.21	□□□□□ -1.74
ERBB3-208	ENST00000549205	LCE3C	Q5T5A8	94 aa		4.2	□□□□□ -1.74
ERBB3-208	ENST00000549205	KRTAP4-7	Q9BYR0	210 aa		4.18	□□□□□ -1.74
ERBB3-208	ENST00000549205	DST	Q03001	7570 aa	Known RBP	4.14	□□□□□ -1.75
ERBB3-208	ENST00000549205	KRTAP4-3	Q9BYR4	195 aa		4.14	□□□□□ -1.75
ERBB3-208	ENST00000549205	LCE3B	Q5TA77	95 aa		4.06	□□□□□ -1.76
ERBB3-208	ENST00000549205	KRTAP2-3	P0C7H8	128 aa		4.05	□□□□□ -1.76
ERBB3-208	ENST00000549205	KRTAP2-4	Q9BYR9	128 aa		4.05	□□□□□ -1.76
ERBB3-208	ENST00000549205	KRTAP20-1	Q3LI63	56 aa		4.03	□□□□□ -1.76
ERBB3-208	ENST00000549205	SPRR5	A0A1B0GTR4	108 aa		4	□□□□□ -1.77
ERBB3-208	ENST00000549205	KRTAP9-6	A8MVA2	160 aa		3.96	□□□□□ -1.78
ERBB3-208	ENST00000549205	LOC100996750	A0A140TA64	210 aa		3.94	□□□□□ -1.78
ERBB3-208	ENST00000549205	KRTAP2-2	Q9BYT5	123 aa		3.94	□□□□□ -1.78
ERBB3-208	ENST00000549205	KRTAP2-1	Q9BYU5	128 aa		3.94	□□□□□ -1.78
ERBB3-208	ENST00000549205	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.85	□□□□□ -1.79
ERBB3-208	ENST00000549205	KRTAP5-4	Q6L8H1	288 aa		3.78	□□□□□ -1.8
ERBB3-208	ENST00000549205	LCE4A	Q5TA78	99 aa		3.75	□□□□□ -1.81
ERBB3-208	ENST00000549205	LUZP6	Q538Z0	58 aa		3.74	□□□□□ -1.81
ERBB3-208	ENST00000549205	HMCN1	Q96RW7	5635 aa		3.74	□□□□□ -1.81
ERBB3-208	ENST00000549205	MT1A	P04731	61 aa		3.73	□□□□□ -1.81
ERBB3-208	ENST00000549205	KRTAP6-1	Q3LI64	71 aa		3.68	□□□□□ -1.82
ERBB3-208	ENST00000549205	SYNE1	Q8NF91	8797 aa	Known RBP	3.68	□□□□□ -1.82
ERBB3-208	ENST00000549205	MT4	P47944	62 aa		3.65	□□□□□ -1.83
ERBB3-208	ENST00000549205	KRTAP4-9	Q9BYQ8	210 aa		3.65	□□□□□ -1.83
ERBB3-208	ENST00000549205	KRTAP12-4	P60329	112 aa		3.63	□□□□□ -1.83
ERBB3-208	ENST00000549205	LCE1D	Q5T752	114 aa		3.63	□□□□□ -1.83
ERBB3-208	ENST00000549205	KRTAP4-6	Q9BYQ5	205 aa		3.6	□□□□□ -1.83
ERBB3-208	ENST00000549205	KRTAP9-4	Q9BYQ2	154 aa		3.54	□□□□□ -1.84
ERBB3-208	ENST00000549205	KRTAP20-2	Q3LI61	65 aa		3.53	□□□□□ -1.84
ERBB3-208	ENST00000549205		H3BS24	57 aa		3.5	□□□□□ -1.85
ERBB3-208	ENST00000549205	NDUFAF8	A1L188	74 aa		3.49	□□□□□ -1.85
ERBB3-208	ENST00000549205	AHNAK2	Q8IVF2	5795 aa		3.48	□□□□□ -1.85
ERBB3-208	ENST00000549205	KRTAP6-2	Q3LI66	62 aa		3.43	□□□□□ -1.86
ERBB3-208	ENST00000549205	KRTAP5-3	Q6L8H2	238 aa		3.41	□□□□□ -1.86
ERBB3-208	ENST00000549205	KRTAP5-2	Q701N4	177 aa		3.4	□□□□□ -1.87
ERBB3-208	ENST00000549205	MT3	P25713	68 aa		3.38	□□□□□ -1.87
ERBB3-208	ENST00000549205	GPR98	Q8WXG9	6306 aa		3.31	□□□□□ -1.88
ERBB3-208	ENST00000549205	OBSCN	Q5VST9	7968 aa		3.18	□□□□□ -1.9
ERBB3-208	ENST00000549205	KRTAP5-10	Q6L8G5	202 aa		3.14	□□□□□ -1.91
ERBB3-208	ENST00000549205	LCE3D	Q9BYE3	92 aa		3.12	□□□□□ -1.91
ERBB3-208	ENST00000549205	KRTAP4-11	Q9BYQ6	195 aa		3.11	□□□□□ -1.91
ERBB3-208	ENST00000549205		A0A0A0MQY5	61 aa		3.07	□□□□□ -1.92
ERBB3-208	ENST00000549205	MUC5AC	P98088	5654 aa		3.05	□□□□□ -1.92
ERBB3-208	ENST00000549205	LCE3E	Q5T5B0	92 aa		3.01	□□□□□ -1.93
ERBB3-208	ENST00000549205	KRTAP5-8	O75690	187 aa		3	□□□□□ -1.93
ERBB3-208	ENST00000549205	LCE1E	Q5T753	118 aa		2.99	□□□□□ -1.93
ERBB3-208	ENST00000549205	KRTAP5-7	Q6L8G8	165 aa		2.95	□□□□□ -1.94
ERBB3-208	ENST00000549205	KRTAP5-1	Q6L8H4	278 aa		2.95	□□□□□ -1.94
ERBB3-208	ENST00000549205	INE1	O15225	51 aa		2.89	□□□□□ -1.95
ERBB3-208	ENST00000549205	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.81	□□□□□ -1.96
ERBB3-208	ENST00000549205	KRTAP4-2	Q9BYR5	136 aa		2.79	□□□□□ -1.96
ERBB3-208	ENST00000549205	AHNAK	Q09666	5890 aa	Known RBP	2.78	□□□□□ -1.96
ERBB3-208	ENST00000549205	LCE1C	Q5T751	118 aa		2.78	□□□□□ -1.96
ERBB3-208	ENST00000549205	LCE1B	Q5T7P3	118 aa		2.78	□□□□□ -1.96
ERBB3-208	ENST00000549205	KRTAP9-9	Q9BYP9	154 aa		2.75	□□□□□ -1.97
ERBB3-208	ENST00000549205	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.59	□□□□□ -1.99
ERBB3-208	ENST00000549205	PRM1	P04553	51 aa		2.53	□□□□□ -2
ERBB3-208	ENST00000549205	KRTAP5-11	Q6L8G4	156 aa		2.48	□□□□□ -2.01
ERBB3-208	ENST00000549205	KRTAP21-2	Q3LI59	83 aa		2.42	□□□□□ -2.02
ERBB3-208	ENST00000549205	KRTAP4-12	Q9BQ66	201 aa		2.36	□□□□□ -2.03
ERBB3-208	ENST00000549205	LCE1F	Q5T754	118 aa		2.29	□□□□□ -2.04
ERBB3-208	ENST00000549205	KRTAP4-4	Q9BYR3	166 aa		2.15	□□□□□ -2.07
ERBB3-208	ENST00000549205	PHGR1	C9JFL3	82 aa		2.13	□□□□□ -2.07
ERBB3-208	ENST00000549205	MUC19	Q7Z5P9	8384 aa		1.92	□□□□□ -2.1
ERBB3-208	ENST00000549205	KRTAP21-1	Q3LI58	79 aa		1.51	□□□□□ -2.17
ERBB3-208	ENST00000549205	MUC16	Q8WXI7	14507 aa		1.39	□□□□□ -2.19

Retrieved 78 of 20,778 RNA–protein pairs in 70.5 ms