RNA–Protein interactions for RNA: ENST00000549131.1

LINC00661-203, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-203ENST00000549131 UQCR11O14957 56 aa5.18□□□□□ -1.58
LINC00661-203ENST00000549131 GPR98Q8WXG9 6306 aa5.12□□□□□ -1.59
LINC00661-203ENST00000549131 KRTAP4-3Q9BYR4 195 aa5.1□□□□□ -1.59
LINC00661-203ENST00000549131 LCE1DQ5T752 114 aa5.09□□□□□ -1.59
LINC00661-203ENST00000549131 KRTAP12-3P60328 96 aa5.06□□□□□ -1.6
LINC00661-203ENST00000549131 MIR22HGQ0VDD5 57 aa5.06□□□□□ -1.6
LINC00661-203ENST00000549131 LCE4AQ5TA78 99 aa5.06□□□□□ -1.6
LINC00661-203ENST00000549131 MT4P47944 62 aa5.05□□□□□ -1.6
LINC00661-203ENST00000549131 HMCN1Q96RW7 5635 aa5.03□□□□□ -1.6
LINC00661-203ENST00000549131 K7ERS5 55 aa5□□□□□ -1.61
LINC00661-203ENST00000549131 PSPHP1O15172 72 aa4.98□□□□□ -1.61
LINC00661-203ENST00000549131 KRTAP25-1Q3LHN0 102 aa4.98□□□□□ -1.61
LINC00661-203ENST00000549131 KRTAP4-7Q9BYR0 210 aa4.98□□□□□ -1.61
LINC00661-203ENST00000549131 V9GYY9 64 aa4.96□□□□□ -1.62
LINC00661-203ENST00000549131 KRTAP5-4Q6L8H1 288 aa4.95□□□□□ -1.62
LINC00661-203ENST00000549131 Q1T7F1 81 aa4.91□□□□□ -1.62
LINC00661-203ENST00000549131 RPS28P62857 69 aaKnown RBP4.88□□□□□ -1.63
LINC00661-203ENST00000549131 AHNAK2Q8IVF2 5795 aa4.87□□□□□ -1.63
LINC00661-203ENST00000549131 KRTAP4-6Q9BYQ5 205 aa4.87□□□□□ -1.63
LINC00661-203ENST00000549131 A6NED7 52 aa4.82□□□□□ -1.64
LINC00661-203ENST00000549131 KRTAP5-5Q701N2 237 aaPredicted RBP4.76□□□□□ -1.65
LINC00661-203ENST00000549131 KRTAP23-1A1A580 65 aa4.75□□□□□ -1.65
LINC00661-203ENST00000549131 CDC42SE1Q9NRR8 79 aa4.73□□□□□ -1.65
LINC00661-203ENST00000549131 LOC100996750A0A140TA64 210 aa4.72□□□□□ -1.65
LINC00661-203ENST00000549131 KRTAP19-4Q3LI73 84 aa4.71□□□□□ -1.66
LINC00661-203ENST00000549131 KRTAP15-1Q3LI76 137 aa4.71□□□□□ -1.66
LINC00661-203ENST00000549131 KRTAP5-10Q6L8G5 202 aa4.71□□□□□ -1.66
LINC00661-203ENST00000549131 KRTAP20-2Q3LI61 65 aa4.7□□□□□ -1.66
LINC00661-203ENST00000549131 SPRR5A0A1B0GTR4 108 aa4.66□□□□□ -1.66
LINC00661-203ENST00000549131 KRTAP12-4P60329 112 aa4.66□□□□□ -1.66
LINC00661-203ENST00000549131 LCE3CQ5T5A8 94 aa4.65□□□□□ -1.67
LINC00661-203ENST00000549131 ROMO1P60602 79 aa4.63□□□□□ -1.67
LINC00661-203ENST00000549131 SYNE1Q8NF91 8797 aaKnown RBP4.6□□□□□ -1.67
LINC00661-203ENST00000549131 KRTAP5-3Q6L8H2 238 aa4.6□□□□□ -1.67
LINC00661-203ENST00000549131 KRTAP5-7Q6L8G8 165 aa4.52□□□□□ -1.69
LINC00661-203ENST00000549131 BRK1Q8WUW1 75 aa4.47□□□□□ -1.69
LINC00661-203ENST00000549131 MT1AP04731 61 aa4.46□□□□□ -1.7
LINC00661-203ENST00000549131 KRTAP6-1Q3LI64 71 aa4.43□□□□□ -1.7
LINC00661-203ENST00000549131 KRTAP9-6A8MVA2 160 aa4.38□□□□□ -1.71
LINC00661-203ENST00000549131 KRTAP5-2Q701N4 177 aa4.34□□□□□ -1.71
LINC00661-203ENST00000549131 KRTAP9-4Q9BYQ2 154 aa4.28□□□□□ -1.72
LINC00661-203ENST00000549131 KRTAP4-11Q9BYQ6 195 aa4.28□□□□□ -1.72
LINC00661-203ENST00000549131 PRO0628Q9UI54 55 aa4.26□□□□□ -1.73
LINC00661-203ENST00000549131 KRTAP6-2Q3LI66 62 aa4.24□□□□□ -1.73
LINC00661-203ENST00000549131 PMAIP1Q13794 54 aa4.19□□□□□ -1.74
LINC00661-203ENST00000549131 KRTAP5-8O75690 187 aa4.14□□□□□ -1.75
LINC00661-203ENST00000549131 OBSCNQ5VST9 7968 aa4.12□□□□□ -1.75
LINC00661-203ENST00000549131 MT3P25713 68 aa4.07□□□□□ -1.76
LINC00661-203ENST00000549131 AHNAKQ09666 5890 aaKnown RBP4.01□□□□□ -1.77
LINC00661-203ENST00000549131 MUC5ACP98088 5654 aa4□□□□□ -1.77
LINC00661-203ENST00000549131 KTN1-AS1Q86SY8 53 aa3.99□□□□□ -1.77
LINC00661-203ENST00000549131 MUC5BQ9HC84 5762 aaPredicted RBP3.99□□□□□ -1.77
LINC00661-203ENST00000549131 PRAC1Q96KF2 57 aa3.95□□□□□ -1.78
LINC00661-203ENST00000549131 KRTAP9-9Q9BYP9 154 aa3.94□□□□□ -1.78
LINC00661-203ENST00000549131 KRTAP5-1Q6L8H4 278 aa3.89□□□□□ -1.79
LINC00661-203ENST00000549131 SVIPQ8NHG7 77 aa3.84□□□□□ -1.79
LINC00661-203ENST00000549131 LCE1EQ5T753 118 aa3.71□□□□□ -1.82
LINC00661-203ENST00000549131 LCE1BQ5T7P3 118 aa3.55□□□□□ -1.84
LINC00661-203ENST00000549131 KRTAP4-2Q9BYR5 136 aa3.52□□□□□ -1.85
LINC00661-203ENST00000549131 LCE1CQ5T751 118 aa3.45□□□□□ -1.86
LINC00661-203ENST00000549131 LCE3DQ9BYE3 92 aa3.35□□□□□ -1.87
LINC00661-203ENST00000549131 LUZP6Q538Z0 58 aa3.28□□□□□ -1.88
LINC00661-203ENST00000549131 KRTAP4-12Q9BQ66 201 aa3.22□□□□□ -1.89
LINC00661-203ENST00000549131 LCE3EQ5T5B0 92 aa3.15□□□□□ -1.91
LINC00661-203ENST00000549131 KRTAP5-11Q6L8G4 156 aa3.14□□□□□ -1.91
LINC00661-203ENST00000549131 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.13□□□□□ -1.91
LINC00661-203ENST00000549131 NDUFAF8A1L188 74 aa3.07□□□□□ -1.92
LINC00661-203ENST00000549131 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
LINC00661-203ENST00000549131 KRTAP21-2Q3LI59 83 aa2.9□□□□□ -1.95
LINC00661-203ENST00000549131 PHGR1C9JFL3 82 aa2.77□□□□□ -1.97
LINC00661-203ENST00000549131 KRTAP4-4Q9BYR3 166 aa2.7□□□□□ -1.98
LINC00661-203ENST00000549131 A0A0A0MQY5 61 aa2.69□□□□□ -1.98
LINC00661-203ENST00000549131 MUC19Q7Z5P9 8384 aa2.54□□□□□ -2
LINC00661-203ENST00000549131 INE1O15225 51 aa2.52□□□□□ -2.01
LINC00661-203ENST00000549131 H3BS24 57 aa2.45□□□□□ -2.02
LINC00661-203ENST00000549131 PRM1P04553 51 aa2.38□□□□□ -2.03
LINC00661-203ENST00000549131 KRTAP21-1Q3LI58 79 aa2.09□□□□□ -2.07
LINC00661-203ENST00000549131 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 42.1 ms