RNA–Protein interactions for RNA: ENST00000548598.5

RACGAP1-213, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 4

Gene RACGAP1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-213ENST00000548598 LCE4AQ5TA78 99 aa5.91□□□□□ -1.46
RACGAP1-213ENST00000548598 LINC01558Q9Y6Z2 57 aa5.89□□□□□ -1.47
RACGAP1-213ENST00000548598 KRTAP4-3Q9BYR4 195 aa5.85□□□□□ -1.47
RACGAP1-213ENST00000548598 KRTAP5-4Q6L8H1 288 aa5.83□□□□□ -1.48
RACGAP1-213ENST00000548598 MT4P47944 62 aa5.81□□□□□ -1.48
RACGAP1-213ENST00000548598 KRTAP12-3P60328 96 aa5.75□□□□□ -1.49
RACGAP1-213ENST00000548598 UQCR11O14957 56 aa5.74□□□□□ -1.49
RACGAP1-213ENST00000548598 TMEM258P61165 79 aa5.74□□□□□ -1.49
RACGAP1-213ENST00000548598 AHNAK2Q8IVF2 5795 aa5.7□□□□□ -1.5
RACGAP1-213ENST00000548598 KRTAP4-7Q9BYR0 210 aa5.7□□□□□ -1.5
RACGAP1-213ENST00000548598 KRTAP4-6Q9BYQ5 205 aa5.67□□□□□ -1.5
RACGAP1-213ENST00000548598 KRTAP25-1Q3LHN0 102 aa5.61□□□□□ -1.51
RACGAP1-213ENST00000548598 MIR22HGQ0VDD5 57 aa5.59□□□□□ -1.51
RACGAP1-213ENST00000548598 KRTAP5-10Q6L8G5 202 aa5.58□□□□□ -1.52
RACGAP1-213ENST00000548598 KRTAP5-5Q701N2 237 aaPredicted RBP5.58□□□□□ -1.52
RACGAP1-213ENST00000548598 KRTAP20-2Q3LI61 65 aa5.48□□□□□ -1.53
RACGAP1-213ENST00000548598 K7ERS5 55 aa5.47□□□□□ -1.53
RACGAP1-213ENST00000548598 KRTAP19-4Q3LI73 84 aa5.46□□□□□ -1.54
RACGAP1-213ENST00000548598 SPRR5A0A1B0GTR4 108 aa5.45□□□□□ -1.54
RACGAP1-213ENST00000548598 KRTAP23-1A1A580 65 aa5.43□□□□□ -1.54
RACGAP1-213ENST00000548598 V9GYY9 64 aa5.43□□□□□ -1.54
RACGAP1-213ENST00000548598 KRTAP5-3Q6L8H2 238 aa5.42□□□□□ -1.54
RACGAP1-213ENST00000548598 LOC100996750A0A140TA64 210 aa5.41□□□□□ -1.54
RACGAP1-213ENST00000548598 PSPHP1O15172 72 aa5.41□□□□□ -1.54
RACGAP1-213ENST00000548598 Q1T7F1 81 aa5.41□□□□□ -1.54
RACGAP1-213ENST00000548598 SYNE1Q8NF91 8797 aaKnown RBP5.4□□□□□ -1.55
RACGAP1-213ENST00000548598 KRTAP12-4P60329 112 aa5.37□□□□□ -1.55
RACGAP1-213ENST00000548598 KRTAP5-7Q6L8G8 165 aa5.36□□□□□ -1.55
RACGAP1-213ENST00000548598 KRTAP15-1Q3LI76 137 aa5.35□□□□□ -1.55
RACGAP1-213ENST00000548598 LCE3CQ5T5A8 94 aa5.29□□□□□ -1.56
RACGAP1-213ENST00000548598 A6NED7 52 aa5.22□□□□□ -1.57
RACGAP1-213ENST00000548598 CDC42SE1Q9NRR8 79 aa5.2□□□□□ -1.58
RACGAP1-213ENST00000548598 MT1AP04731 61 aa5.13□□□□□ -1.59
RACGAP1-213ENST00000548598 SVIPQ8NHG7 77 aa5.12□□□□□ -1.59
RACGAP1-213ENST00000548598 ROMO1P60602 79 aa5.11□□□□□ -1.59
RACGAP1-213ENST00000548598 KRTAP6-1Q3LI64 71 aa5.1□□□□□ -1.59
RACGAP1-213ENST00000548598 KRTAP5-2Q701N4 177 aa5.1□□□□□ -1.59
RACGAP1-213ENST00000548598 KRTAP9-6A8MVA2 160 aa5.03□□□□□ -1.6
RACGAP1-213ENST00000548598 RPS28P62857 69 aaKnown RBP5.03□□□□□ -1.6
RACGAP1-213ENST00000548598 KRTAP4-11Q9BYQ6 195 aa5.01□□□□□ -1.61
RACGAP1-213ENST00000548598 KRTAP9-4Q9BYQ2 154 aa4.95□□□□□ -1.62
RACGAP1-213ENST00000548598 KRTAP6-2Q3LI66 62 aa4.87□□□□□ -1.63
RACGAP1-213ENST00000548598 KRTAP5-8O75690 187 aa4.86□□□□□ -1.63
RACGAP1-213ENST00000548598 OBSCNQ5VST9 7968 aa4.85□□□□□ -1.63
RACGAP1-213ENST00000548598 PCP4P48539 62 aa4.78□□□□□ -1.64
RACGAP1-213ENST00000548598 MUC5BQ9HC84 5762 aaPredicted RBP4.74□□□□□ -1.65
RACGAP1-213ENST00000548598 MT3P25713 68 aa4.68□□□□□ -1.66
RACGAP1-213ENST00000548598 AHNAKQ09666 5890 aaKnown RBP4.67□□□□□ -1.66
RACGAP1-213ENST00000548598 MUC5ACP98088 5654 aa4.67□□□□□ -1.66
RACGAP1-213ENST00000548598 KRTAP5-1Q6L8H4 278 aa4.58□□□□□ -1.68
RACGAP1-213ENST00000548598 KRTAP9-9Q9BYP9 154 aa4.58□□□□□ -1.68
RACGAP1-213ENST00000548598 LCE1EQ5T753 118 aa4.34□□□□□ -1.71
RACGAP1-213ENST00000548598 BRK1Q8WUW1 75 aa4.33□□□□□ -1.72
RACGAP1-213ENST00000548598 KRTAP4-2Q9BYR5 136 aa4.13□□□□□ -1.75
RACGAP1-213ENST00000548598 PMAIP1Q13794 54 aa4.05□□□□□ -1.76
RACGAP1-213ENST00000548598 LCE1CQ5T751 118 aa4.04□□□□□ -1.76
RACGAP1-213ENST00000548598 LCE1BQ5T7P3 118 aa4.04□□□□□ -1.76
RACGAP1-213ENST00000548598 PRAC1Q96KF2 57 aa3.97□□□□□ -1.77
RACGAP1-213ENST00000548598 H3BS24 57 aa3.96□□□□□ -1.78
RACGAP1-213ENST00000548598 LCE3DQ9BYE3 92 aa3.79□□□□□ -1.8
RACGAP1-213ENST00000548598 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.69□□□□□ -1.82
RACGAP1-213ENST00000548598 KRTAP4-12Q9BQ66 201 aa3.69□□□□□ -1.82
RACGAP1-213ENST00000548598 KRTAP5-11Q6L8G4 156 aa3.68□□□□□ -1.82
RACGAP1-213ENST00000548598 PRO0628Q9UI54 55 aa3.64□□□□□ -1.83
RACGAP1-213ENST00000548598 LCE1FQ5T754 118 aa3.59□□□□□ -1.83
RACGAP1-213ENST00000548598 A0A0A0MQY5 61 aa3.54□□□□□ -1.84
RACGAP1-213ENST00000548598 LCE3EQ5T5B0 92 aa3.54□□□□□ -1.84
RACGAP1-213ENST00000548598 KTN1-AS1Q86SY8 53 aa3.54□□□□□ -1.84
RACGAP1-213ENST00000548598 KRTAP21-2Q3LI59 83 aa3.38□□□□□ -1.87
RACGAP1-213ENST00000548598 LUZP6Q538Z0 58 aa3.34□□□□□ -1.87
RACGAP1-213ENST00000548598 PHGR1C9JFL3 82 aa3.21□□□□□ -1.9
RACGAP1-213ENST00000548598 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
RACGAP1-213ENST00000548598 MUC19Q7Z5P9 8384 aa2.98□□□□□ -1.93
RACGAP1-213ENST00000548598 PRM1P04553 51 aa2.61□□□□□ -1.99
RACGAP1-213ENST00000548598 NDUFAF8A1L188 74 aa2.53□□□□□ -2
RACGAP1-213ENST00000548598 KRTAP21-1Q3LI58 79 aa2.45□□□□□ -2.02
RACGAP1-213ENST00000548598 INE1O15225 51 aa2.25□□□□□ -2.05
RACGAP1-213ENST00000548598 MUC16Q8WXI7 14507 aa2.06□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 197 ms