RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 LCE3CQ5T5A8 94 aa3.65□□□□□ -1.83
SMARCD1-205ENST00000548573 KRTAP4-11Q9BYQ6 195 aa3.59□□□□□ -1.83
SMARCD1-205ENST00000548573 KRTAP9-7A8MTY7 169 aa3.54□□□□□ -1.84
SMARCD1-205ENST00000548573 CRCT1Q9UGL9 99 aa3.53□□□□□ -1.84
SMARCD1-205ENST00000548573 LCE4AQ5TA78 99 aa3.53□□□□□ -1.84
SMARCD1-205ENST00000548573 KRTAP19-4Q3LI73 84 aa3.51□□□□□ -1.85
SMARCD1-205ENST00000548573 KRTAP9-6A8MVA2 160 aa3.5□□□□□ -1.85
SMARCD1-205ENST00000548573 KRTAP19-7Q3SYF9 63 aa3.48□□□□□ -1.85
SMARCD1-205ENST00000548573 KRTAP2-3P0C7H8 128 aa3.46□□□□□ -1.86
SMARCD1-205ENST00000548573 KRTAP2-4Q9BYR9 128 aa3.46□□□□□ -1.86
SMARCD1-205ENST00000548573 KRTAP2-1Q9BYU5 128 aa3.46□□□□□ -1.86
SMARCD1-205ENST00000548573 KMT2DO14686 5537 aa3.44□□□□□ -1.86
SMARCD1-205ENST00000548573 USH2AO75445 5202 aa3.44□□□□□ -1.86
SMARCD1-205ENST00000548573 LCE5AQ5TCM9 118 aa3.4□□□□□ -1.86
SMARCD1-205ENST00000548573 MT1LQ93083 61 aa3.39□□□□□ -1.87
SMARCD1-205ENST00000548573 MT1EP04732 61 aa3.38□□□□□ -1.87
SMARCD1-205ENST00000548573 KRTAP19-6Q3LI70 58 aa3.26□□□□□ -1.89
SMARCD1-205ENST00000548573 SSPOA2VEC9 5147 aa3.25□□□□□ -1.89
SMARCD1-205ENST00000548573 MT1GP13640 62 aa3.15□□□□□ -1.9
SMARCD1-205ENST00000548573 KRTAP4-3Q9BYR4 195 aa3.15□□□□□ -1.9
SMARCD1-205ENST00000548573 MT1MQ8N339 61 aa3.15□□□□□ -1.91
SMARCD1-205ENST00000548573 KRTAP19-3Q7Z4W3 81 aa3.14□□□□□ -1.91
SMARCD1-205ENST00000548573 FSIP2Q5CZC0 6907 aa3.08□□□□□ -1.92
SMARCD1-205ENST00000548573 FCGBPQ9Y6R7 5405 aaPredicted RBP3.06□□□□□ -1.92
SMARCD1-205ENST00000548573 KRTAP20-1Q3LI63 56 aa3.05□□□□□ -1.92
SMARCD1-205ENST00000548573 KRTAP12-4P60329 112 aa3.05□□□□□ -1.92
SMARCD1-205ENST00000548573 MUC12Q9UKN1 5478 aa2.99□□□□□ -1.93
SMARCD1-205ENST00000548573 GPR98Q8WXG9 6306 aa2.95□□□□□ -1.94
SMARCD1-205ENST00000548573 SPRR2FQ96RM1 72 aa2.95□□□□□ -1.94
SMARCD1-205ENST00000548573 NEBP20929 6669 aa2.95□□□□□ -1.94
SMARCD1-205ENST00000548573 MT1AP04731 61 aa2.93□□□□□ -1.94
SMARCD1-205ENST00000548573 KRTAP6-3Q3LI67 103 aa2.91□□□□□ -1.94
SMARCD1-205ENST00000548573 MACF1Q9UPN3 7388 aaKnown RBP2.89□□□□□ -1.95
SMARCD1-205ENST00000548573 KRTAP6-1Q3LI64 71 aa2.86□□□□□ -1.95
SMARCD1-205ENST00000548573 DSTQ03001 7570 aaKnown RBP2.85□□□□□ -1.95
SMARCD1-205ENST00000548573 KRTAP5-9P26371 169 aa2.84□□□□□ -1.95
SMARCD1-205ENST00000548573 LCE3DQ9BYE3 92 aa2.83□□□□□ -1.96
SMARCD1-205ENST00000548573 LCE3EQ5T5B0 92 aa2.81□□□□□ -1.96
SMARCD1-205ENST00000548573 SYNE2Q8WXH0 6885 aaKnown RBP2.8□□□□□ -1.96
SMARCD1-205ENST00000548573 SYNE1Q8NF91 8797 aaKnown RBP2.79□□□□□ -1.96
SMARCD1-205ENST00000548573 KRTAP5-5Q701N2 237 aaPredicted RBP2.79□□□□□ -1.96
SMARCD1-205ENST00000548573 KRTAP2-2Q9BYT5 123 aa2.79□□□□□ -1.96
SMARCD1-205ENST00000548573 LCE1AQ5T7P2 110 aa2.77□□□□□ -1.97
SMARCD1-205ENST00000548573 SPRR2EP22531 72 aa2.75□□□□□ -1.97
SMARCD1-205ENST00000548573 SPRR2BP35325 72 aa2.75□□□□□ -1.97
SMARCD1-205ENST00000548573 SPRR2AP35326 72 aa2.75□□□□□ -1.97
SMARCD1-205ENST00000548573 PRM1P04553 51 aa2.7□□□□□ -1.98
SMARCD1-205ENST00000548573 MDN1Q9NU22 5596 aa2.68□□□□□ -1.98
SMARCD1-205ENST00000548573 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.67□□□□□ -1.98
SMARCD1-205ENST00000548573 SPRR2DP22532 72 aa2.64□□□□□ -1.99
SMARCD1-205ENST00000548573 KRTAP6-2Q3LI66 62 aa2.61□□□□□ -1.99
SMARCD1-205ENST00000548573 MT3P25713 68 aa2.56□□□□□ -2
SMARCD1-205ENST00000548573 KRTAP5-7Q6L8G8 165 aa2.53□□□□□ -2
SMARCD1-205ENST00000548573 LCE1FQ5T754 118 aa2.52□□□□□ -2.01
SMARCD1-205ENST00000548573 KRTAP5-10Q6L8G5 202 aa2.45□□□□□ -2.02
SMARCD1-205ENST00000548573 LCE1EQ5T753 118 aa2.42□□□□□ -2.02
SMARCD1-205ENST00000548573 AHNAK2Q8IVF2 5795 aa2.41□□□□□ -2.02
SMARCD1-205ENST00000548573 KRTAP5-4Q6L8H1 288 aa2.4□□□□□ -2.02
SMARCD1-205ENST00000548573 KRTAP5-11Q6L8G4 156 aa2.38□□□□□ -2.03
SMARCD1-205ENST00000548573 MUC5BQ9HC84 5762 aaPredicted RBP2.37□□□□□ -2.03
SMARCD1-205ENST00000548573 OBSCNQ5VST9 7968 aa2.36□□□□□ -2.03
SMARCD1-205ENST00000548573 AHNAKQ09666 5890 aaKnown RBP2.35□□□□□ -2.03
SMARCD1-205ENST00000548573 MT4P47944 62 aa2.3□□□□□ -2.04
SMARCD1-205ENST00000548573 KRTAP5-2Q701N4 177 aa2.27□□□□□ -2.05
SMARCD1-205ENST00000548573 KRTAP5-1Q6L8H4 278 aa2.25□□□□□ -2.05
SMARCD1-205ENST00000548573 KRTAP20-2Q3LI61 65 aa2.24□□□□□ -2.05
SMARCD1-205ENST00000548573 KRTAP4-4Q9BYR3 166 aa2.2□□□□□ -2.06
SMARCD1-205ENST00000548573 HMCN1Q96RW7 5635 aa2.19□□□□□ -2.06
SMARCD1-205ENST00000548573 MUC5ACP98088 5654 aa2.11□□□□□ -2.07
SMARCD1-205ENST00000548573 LCE1BQ5T7P3 118 aa2.01□□□□□ -2.09
SMARCD1-205ENST00000548573 LCE1CQ5T751 118 aa1.97□□□□□ -2.09
SMARCD1-205ENST00000548573 KRTAP21-2Q3LI59 83 aa1.86□□□□□ -2.11
SMARCD1-205ENST00000548573 KRTAP5-8O75690 187 aa1.85□□□□□ -2.11
SMARCD1-205ENST00000548573 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
SMARCD1-205ENST00000548573 MUC19Q7Z5P9 8384 aa1.55□□□□□ -2.16
SMARCD1-205ENST00000548573 PHGR1C9JFL3 82 aa1.44□□□□□ -2.18
SMARCD1-205ENST00000548573 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 110.1 ms