RNA–Protein interactions for RNA: ENST00000548560.1

SP1-203, Transcript of Sp1 transcription factor, humanhuman

TSL 2

Gene SP1, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-203ENST00000548560 KRTAP10-12P60413 245 aa3.5□□□□□ -1.85
SP1-203ENST00000548560 KRTAP8-1Q8IUC2 63 aa3.5□□□□□ -1.85
SP1-203ENST00000548560 LINC01558Q9Y6Z2 57 aa3.5□□□□□ -1.85
SP1-203ENST00000548560 RPS28P62857 69 aaKnown RBP3.48□□□□□ -1.85
SP1-203ENST00000548560 SPRR2FQ96RM1 72 aa3.47□□□□□ -1.85
SP1-203ENST00000548560 PSPHP1O15172 72 aa3.46□□□□□ -1.86
SP1-203ENST00000548560 KRTAP12-1P59990 96 aa3.46□□□□□ -1.86
SP1-203ENST00000548560 KRTAP2-3P0C7H8 128 aa3.44□□□□□ -1.86
SP1-203ENST00000548560 KRTAP2-4Q9BYR9 128 aa3.44□□□□□ -1.86
SP1-203ENST00000548560 UQCR11O14957 56 aa3.42□□□□□ -1.86
SP1-203ENST00000548560 LCE3CQ5T5A8 94 aa3.41□□□□□ -1.86
SP1-203ENST00000548560 LCE1EQ5T753 118 aa3.4□□□□□ -1.87
SP1-203ENST00000548560 SPRR2EP22531 72 aa3.39□□□□□ -1.87
SP1-203ENST00000548560 SPRR2BP35325 72 aa3.39□□□□□ -1.87
SP1-203ENST00000548560 SPRR2AP35326 72 aa3.39□□□□□ -1.87
SP1-203ENST00000548560 PRO0628Q9UI54 55 aa3.37□□□□□ -1.87
SP1-203ENST00000548560 MIR22HGQ0VDD5 57 aa3.35□□□□□ -1.87
SP1-203ENST00000548560 Q1T7F1 81 aa3.34□□□□□ -1.87
SP1-203ENST00000548560 KRTAP2-1Q9BYU5 128 aa3.32□□□□□ -1.88
SP1-203ENST00000548560 K7ERS5 55 aa3.31□□□□□ -1.88
SP1-203ENST00000548560 TNP1P09430 55 aa3.31□□□□□ -1.88
SP1-203ENST00000548560 LUZP6Q538Z0 58 aa3.29□□□□□ -1.88
SP1-203ENST00000548560 SPRR2DP22532 72 aa3.28□□□□□ -1.88
SP1-203ENST00000548560 C10orf95Q9H7T3 257 aa3.28□□□□□ -1.88
SP1-203ENST00000548560 A6NED7 52 aa3.27□□□□□ -1.89
SP1-203ENST00000548560 KRTAP19-7Q3SYF9 63 aa3.24□□□□□ -1.89
SP1-203ENST00000548560 MT1EP04732 61 aa3.22□□□□□ -1.89
SP1-203ENST00000548560 KRTAP19-5Q3LI72 72 aa3.21□□□□□ -1.9
SP1-203ENST00000548560 LCE3AQ5TA76 89 aa3.21□□□□□ -1.9
SP1-203ENST00000548560 KRTAP25-1Q3LHN0 102 aa3.18□□□□□ -1.9
SP1-203ENST00000548560 KRTAP19-3Q7Z4W3 81 aa3.18□□□□□ -1.9
SP1-203ENST00000548560 PP632Q6XCG6 107 aa3.14□□□□□ -1.91
SP1-203ENST00000548560 CDC42SE1Q9NRR8 79 aa3.13□□□□□ -1.91
SP1-203ENST00000548560 MT1GP13640 62 aa3.12□□□□□ -1.91
SP1-203ENST00000548560 KRTAP5-1Q6L8H4 278 aa3.12□□□□□ -1.91
SP1-203ENST00000548560 LCE3EQ5T5B0 92 aa3.11□□□□□ -1.91
SP1-203ENST00000548560 KRTAP12-3P60328 96 aa3.1□□□□□ -1.91
SP1-203ENST00000548560 MT1LQ93083 61 aa3.1□□□□□ -1.91
SP1-203ENST00000548560 DSTQ03001 7570 aaKnown RBP3.09□□□□□ -1.91
SP1-203ENST00000548560 BRK1Q8WUW1 75 aa3.09□□□□□ -1.91
SP1-203ENST00000548560 ROMO1P60602 79 aa3.06□□□□□ -1.92
SP1-203ENST00000548560 MT1MQ8N339 61 aa3.06□□□□□ -1.92
SP1-203ENST00000548560 GPR98Q8WXG9 6306 aa3.06□□□□□ -1.92
SP1-203ENST00000548560 KRTAP5-4Q6L8H1 288 aa3.01□□□□□ -1.93
SP1-203ENST00000548560 KRTAP9-6A8MVA2 160 aa3□□□□□ -1.93
SP1-203ENST00000548560 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
SP1-203ENST00000548560 PMAIP1Q13794 54 aa2.98□□□□□ -1.93
SP1-203ENST00000548560 KRTAP4-3Q9BYR4 195 aa2.96□□□□□ -1.94
SP1-203ENST00000548560 KTN1-AS1Q86SY8 53 aa2.92□□□□□ -1.94
SP1-203ENST00000548560 HMCN1Q96RW7 5635 aa2.89□□□□□ -1.95
SP1-203ENST00000548560 MT4P47944 62 aa2.87□□□□□ -1.95
SP1-203ENST00000548560 KRTAP5-10Q6L8G5 202 aa2.86□□□□□ -1.95
SP1-203ENST00000548560 SPRR5A0A1B0GTR4 108 aa2.85□□□□□ -1.95
SP1-203ENST00000548560 AHNAK2Q8IVF2 5795 aa2.83□□□□□ -1.96
SP1-203ENST00000548560 KRTAP5-5Q701N2 237 aaPredicted RBP2.77□□□□□ -1.97
SP1-203ENST00000548560 KRTAP5-7Q6L8G8 165 aa2.76□□□□□ -1.97
SP1-203ENST00000548560 OBSCNQ5VST9 7968 aa2.73□□□□□ -1.97
SP1-203ENST00000548560 KRTAP12-4P60329 112 aa2.73□□□□□ -1.97
SP1-203ENST00000548560 LCE3DQ9BYE3 92 aa2.69□□□□□ -1.98
SP1-203ENST00000548560 KRTAP20-2Q3LI61 65 aa2.68□□□□□ -1.98
SP1-203ENST00000548560 MT1AP04731 61 aa2.65□□□□□ -1.99
SP1-203ENST00000548560 SYNE1Q8NF91 8797 aaKnown RBP2.61□□□□□ -1.99
SP1-203ENST00000548560 KRTAP6-1Q3LI64 71 aa2.61□□□□□ -1.99
SP1-203ENST00000548560 KRTAP5-2Q701N4 177 aa2.54□□□□□ -2
SP1-203ENST00000548560 KRTAP6-2Q3LI66 62 aa2.48□□□□□ -2.01
SP1-203ENST00000548560 KRTAP5-8O75690 187 aa2.44□□□□□ -2.02
SP1-203ENST00000548560 MUC5ACP98088 5654 aa2.39□□□□□ -2.03
SP1-203ENST00000548560 MUC5BQ9HC84 5762 aaPredicted RBP2.32□□□□□ -2.04
SP1-203ENST00000548560 AHNAKQ09666 5890 aaKnown RBP2.32□□□□□ -2.04
SP1-203ENST00000548560 LCE1CQ5T751 118 aa2.21□□□□□ -2.06
SP1-203ENST00000548560 LCE1BQ5T7P3 118 aa2.21□□□□□ -2.06
SP1-203ENST00000548560 INE1O15225 51 aa2.02□□□□□ -2.09
SP1-203ENST00000548560 MUC19Q7Z5P9 8384 aa1.88□□□□□ -2.11
SP1-203ENST00000548560 KRTAP21-2Q3LI59 83 aa1.7□□□□□ -2.14
SP1-203ENST00000548560 PHGR1C9JFL3 82 aa1.63□□□□□ -2.15
SP1-203ENST00000548560 PRM1P04553 51 aa1.57□□□□□ -2.16
SP1-203ENST00000548560 KRTAP21-1Q3LI58 79 aa1.22□□□□□ -2.21
SP1-203ENST00000548560 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 243.3 ms