RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 ANAPC13Q9BS18 74 aa4.14□□□□□ -1.75
TRAFD1-205ENST00000548277 LCE3AQ5TA76 89 aa4.12□□□□□ -1.75
TRAFD1-205ENST00000548277 C10orf95Q9H7T3 257 aa4.12□□□□□ -1.75
TRAFD1-205ENST00000548277 TNP1P09430 55 aa4.11□□□□□ -1.75
TRAFD1-205ENST00000548277 KRTAP5-3Q6L8H2 238 aa4.1□□□□□ -1.75
TRAFD1-205ENST00000548277 KRTAP5-7Q6L8G8 165 aa4.09□□□□□ -1.75
TRAFD1-205ENST00000548277 KRTAP4-7Q9BYR0 210 aa4.08□□□□□ -1.76
TRAFD1-205ENST00000548277 CCDC179H3BU77 68 aa4.07□□□□□ -1.76
TRAFD1-205ENST00000548277 PRR15LQ9BU68 103 aa4.06□□□□□ -1.76
TRAFD1-205ENST00000548277 SPRR5A0A1B0GTR4 108 aa4.04□□□□□ -1.76
TRAFD1-205ENST00000548277 ATP5EP56381 51 aaPredicted RBP4.02□□□□□ -1.77
TRAFD1-205ENST00000548277 LINC01558Q9Y6Z2 57 aa4.01□□□□□ -1.77
TRAFD1-205ENST00000548277 KRTAP20-2Q3LI61 65 aa4□□□□□ -1.77
TRAFD1-205ENST00000548277 KRTAP12-3P60328 96 aa3.96□□□□□ -1.78
TRAFD1-205ENST00000548277 LOC100996750A0A140TA64 210 aa3.93□□□□□ -1.78
TRAFD1-205ENST00000548277 UQCR11O14957 56 aa3.93□□□□□ -1.78
TRAFD1-205ENST00000548277 KRTAP12-4P60329 112 aa3.9□□□□□ -1.79
TRAFD1-205ENST00000548277 KRTAP5-5Q701N2 237 aaPredicted RBP3.89□□□□□ -1.79
TRAFD1-205ENST00000548277 TMEM258P61165 79 aa3.88□□□□□ -1.79
TRAFD1-205ENST00000548277 MIR22HGQ0VDD5 57 aa3.84□□□□□ -1.79
TRAFD1-205ENST00000548277 KRTAP25-1Q3LHN0 102 aa3.83□□□□□ -1.8
TRAFD1-205ENST00000548277 SYNE1Q8NF91 8797 aaKnown RBP3.82□□□□□ -1.8
TRAFD1-205ENST00000548277 K7ERS5 55 aa3.77□□□□□ -1.81
TRAFD1-205ENST00000548277 PSPHP1O15172 72 aa3.73□□□□□ -1.81
TRAFD1-205ENST00000548277 KRTAP4-11Q9BYQ6 195 aa3.72□□□□□ -1.81
TRAFD1-205ENST00000548277 KRTAP19-4Q3LI73 84 aa3.7□□□□□ -1.82
TRAFD1-205ENST00000548277 V9GYY9 64 aa3.7□□□□□ -1.82
TRAFD1-205ENST00000548277 KRTAP23-1A1A580 65 aa3.67□□□□□ -1.82
TRAFD1-205ENST00000548277 Q1T7F1 81 aa3.67□□□□□ -1.82
TRAFD1-205ENST00000548277 KRTAP15-1Q3LI76 137 aa3.67□□□□□ -1.82
TRAFD1-205ENST00000548277 LCE3CQ5T5A8 94 aa3.64□□□□□ -1.83
TRAFD1-205ENST00000548277 KRTAP5-8O75690 187 aa3.62□□□□□ -1.83
TRAFD1-205ENST00000548277 KRTAP6-1Q3LI64 71 aa3.6□□□□□ -1.83
TRAFD1-205ENST00000548277 KRTAP5-2Q701N4 177 aa3.6□□□□□ -1.83
TRAFD1-205ENST00000548277 A6NED7 52 aa3.59□□□□□ -1.83
TRAFD1-205ENST00000548277 MT1AP04731 61 aa3.56□□□□□ -1.84
TRAFD1-205ENST00000548277 CDC42SE1Q9NRR8 79 aa3.56□□□□□ -1.84
TRAFD1-205ENST00000548277 OBSCNQ5VST9 7968 aa3.53□□□□□ -1.84
TRAFD1-205ENST00000548277 ROMO1P60602 79 aa3.51□□□□□ -1.85
TRAFD1-205ENST00000548277 MUC5ACP98088 5654 aa3.5□□□□□ -1.85
TRAFD1-205ENST00000548277 KRTAP6-2Q3LI66 62 aa3.5□□□□□ -1.85
TRAFD1-205ENST00000548277 KRTAP9-4Q9BYQ2 154 aa3.5□□□□□ -1.85
TRAFD1-205ENST00000548277 AHNAKQ09666 5890 aaKnown RBP3.5□□□□□ -1.85
TRAFD1-205ENST00000548277 RPS28P62857 69 aaKnown RBP3.49□□□□□ -1.85
TRAFD1-205ENST00000548277 KRTAP9-9Q9BYP9 154 aa3.48□□□□□ -1.85
TRAFD1-205ENST00000548277 MUC5BQ9HC84 5762 aaPredicted RBP3.48□□□□□ -1.85
TRAFD1-205ENST00000548277 KRTAP9-6A8MVA2 160 aa3.44□□□□□ -1.86
TRAFD1-205ENST00000548277 KRTAP4-12Q9BQ66 201 aa3.43□□□□□ -1.86
TRAFD1-205ENST00000548277 KRTAP5-1Q6L8H4 278 aa3.31□□□□□ -1.88
TRAFD1-205ENST00000548277 MT3P25713 68 aa3.29□□□□□ -1.88
TRAFD1-205ENST00000548277 PCP4P48539 62 aa3.25□□□□□ -1.89
TRAFD1-205ENST00000548277 KRTAP4-2Q9BYR5 136 aa3.06□□□□□ -1.92
TRAFD1-205ENST00000548277 LCE1EQ5T753 118 aa3.03□□□□□ -1.92
TRAFD1-205ENST00000548277 LCE1BQ5T7P3 118 aa3□□□□□ -1.93
TRAFD1-205ENST00000548277 BRK1Q8WUW1 75 aa2.97□□□□□ -1.93
TRAFD1-205ENST00000548277 H3BS24 57 aa2.82□□□□□ -1.96
TRAFD1-205ENST00000548277 LCE1CQ5T751 118 aa2.82□□□□□ -1.96
TRAFD1-205ENST00000548277 PMAIP1Q13794 54 aa2.79□□□□□ -1.96
TRAFD1-205ENST00000548277 PRAC1Q96KF2 57 aa2.73□□□□□ -1.97
TRAFD1-205ENST00000548277 LCE3DQ9BYE3 92 aa2.61□□□□□ -1.99
TRAFD1-205ENST00000548277 KRTAP5-11Q6L8G4 156 aa2.57□□□□□ -2
TRAFD1-205ENST00000548277 LCE1FQ5T754 118 aa2.55□□□□□ -2
TRAFD1-205ENST00000548277 PHGR1C9JFL3 82 aa2.52□□□□□ -2.01
TRAFD1-205ENST00000548277 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.5□□□□□ -2.01
TRAFD1-205ENST00000548277 PRO0628Q9UI54 55 aa2.45□□□□□ -2.02
TRAFD1-205ENST00000548277 LCE3EQ5T5B0 92 aa2.44□□□□□ -2.02
TRAFD1-205ENST00000548277 KTN1-AS1Q86SY8 53 aa2.38□□□□□ -2.03
TRAFD1-205ENST00000548277 KRTAP21-2Q3LI59 83 aa2.35□□□□□ -2.03
TRAFD1-205ENST00000548277 SVIPQ8NHG7 77 aa2.32□□□□□ -2.04
TRAFD1-205ENST00000548277 LUZP6Q538Z0 58 aa2.31□□□□□ -2.04
TRAFD1-205ENST00000548277 KRTAP4-4Q9BYR3 166 aa2.3□□□□□ -2.04
TRAFD1-205ENST00000548277 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
TRAFD1-205ENST00000548277 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
TRAFD1-205ENST00000548277 PRM1P04553 51 aa1.79□□□□□ -2.12
TRAFD1-205ENST00000548277 NDUFAF8A1L188 74 aa1.72□□□□□ -2.13
TRAFD1-205ENST00000548277 MUC16Q8WXI7 14507 aa1.55□□□□□ -2.16
TRAFD1-205ENST00000548277 INE1O15225 51 aa1.33□□□□□ -2.2
TRAFD1-205ENST00000548277 A0A0A0MQY5 61 aa1.26□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 199.8 ms