RNA–Protein interactions for RNA: ENST00000548158.1

RACGAP1-210, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 4

Gene RACGAP1, Length 596 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-210ENST00000548158 KRTAP5-1Q6L8H4 278 aa2.28□□□□□ -2.04
RACGAP1-210ENST00000548158 LCE1AQ5T7P2 110 aa2.27□□□□□ -2.05
RACGAP1-210ENST00000548158 KRTAP5-4Q6L8H1 288 aa2.26□□□□□ -2.05
RACGAP1-210ENST00000548158 TNP1P09430 55 aa2.23□□□□□ -2.05
RACGAP1-210ENST00000548158 LCE1EQ5T753 118 aa2.23□□□□□ -2.05
RACGAP1-210ENST00000548158 LCE1FQ5T754 118 aa2.21□□□□□ -2.06
RACGAP1-210ENST00000548158 KRTAP4-4Q9BYR3 166 aa2.21□□□□□ -2.06
RACGAP1-210ENST00000548158 MT1BP07438 61 aa2.19□□□□□ -2.06
RACGAP1-210ENST00000548158 SPRR5A0A1B0GTR4 108 aa2.16□□□□□ -2.06
RACGAP1-210ENST00000548158 KRTAP10-5P60370 271 aa2.16□□□□□ -2.06
RACGAP1-210ENST00000548158 KRTAP19-6Q3LI70 58 aa2.16□□□□□ -2.06
RACGAP1-210ENST00000548158 C10orf95Q9H7T3 257 aa2.15□□□□□ -2.07
RACGAP1-210ENST00000548158 MT1XP80297 61 aa2.12□□□□□ -2.07
RACGAP1-210ENST00000548158 KRTAP10-12P60413 245 aa2.08□□□□□ -2.08
RACGAP1-210ENST00000548158 USH2AO75445 5202 aa2.06□□□□□ -2.08
RACGAP1-210ENST00000548158 KRTAP8-1Q8IUC2 63 aa2.05□□□□□ -2.08
RACGAP1-210ENST00000548158 CRCT1Q9UGL9 99 aa2.05□□□□□ -2.08
RACGAP1-210ENST00000548158 LCE3CQ5T5A8 94 aa2.01□□□□□ -2.09
RACGAP1-210ENST00000548158 SSPOA2VEC9 5147 aa1.99□□□□□ -2.09
RACGAP1-210ENST00000548158 KRTAP12-3P60328 96 aa1.99□□□□□ -2.09
RACGAP1-210ENST00000548158 LCE3AQ5TA76 89 aa1.98□□□□□ -2.09
RACGAP1-210ENST00000548158 FCGBPQ9Y6R7 5405 aaPredicted RBP1.95□□□□□ -2.1
RACGAP1-210ENST00000548158 FSIP2Q5CZC0 6907 aa1.94□□□□□ -2.1
RACGAP1-210ENST00000548158 KRTAP6-3Q3LI67 103 aa1.92□□□□□ -2.1
RACGAP1-210ENST00000548158 KRTAP5-2Q701N4 177 aa1.92□□□□□ -2.1
RACGAP1-210ENST00000548158 KRTAP4-3Q9BYR4 195 aa1.92□□□□□ -2.1
RACGAP1-210ENST00000548158 OBSCNQ5VST9 7968 aa1.91□□□□□ -2.1
RACGAP1-210ENST00000548158 KRTAP19-5Q3LI72 72 aa1.9□□□□□ -2.11
RACGAP1-210ENST00000548158 MT1EP04732 61 aa1.89□□□□□ -2.11
RACGAP1-210ENST00000548158 MT1GP13640 62 aa1.89□□□□□ -2.11
RACGAP1-210ENST00000548158 KRTAP19-7Q3SYF9 63 aa1.89□□□□□ -2.11
RACGAP1-210ENST00000548158 KRTAP12-4P60329 112 aa1.87□□□□□ -2.11
RACGAP1-210ENST00000548158 SPRR2FQ96RM1 72 aa1.86□□□□□ -2.11
RACGAP1-210ENST00000548158 KRTAP19-3Q7Z4W3 81 aa1.85□□□□□ -2.11
RACGAP1-210ENST00000548158 MT1LQ93083 61 aa1.85□□□□□ -2.11
RACGAP1-210ENST00000548158 MACF1Q9UPN3 7388 aaKnown RBP1.84□□□□□ -2.11
RACGAP1-210ENST00000548158 LCE3EQ5T5B0 92 aa1.83□□□□□ -2.12
RACGAP1-210ENST00000548158 KRTAP9-6A8MVA2 160 aa1.82□□□□□ -2.12
RACGAP1-210ENST00000548158 SYNE2Q8WXH0 6885 aaKnown RBP1.79□□□□□ -2.12
RACGAP1-210ENST00000548158 KMT2DO14686 5537 aa1.78□□□□□ -2.12
RACGAP1-210ENST00000548158 SPRR2EP22531 72 aa1.77□□□□□ -2.13
RACGAP1-210ENST00000548158 SPRR2BP35325 72 aa1.77□□□□□ -2.13
RACGAP1-210ENST00000548158 SPRR2AP35326 72 aa1.77□□□□□ -2.13
RACGAP1-210ENST00000548158 MT1MQ8N339 61 aa1.77□□□□□ -2.13
RACGAP1-210ENST00000548158 NEBP20929 6669 aa1.75□□□□□ -2.13
RACGAP1-210ENST00000548158 MDN1Q9NU22 5596 aa1.73□□□□□ -2.13
RACGAP1-210ENST00000548158 SPRR2DP22532 72 aa1.73□□□□□ -2.13
RACGAP1-210ENST00000548158 LCE3DQ9BYE3 92 aa1.7□□□□□ -2.14
RACGAP1-210ENST00000548158 MUC12Q9UKN1 5478 aa1.68□□□□□ -2.14
RACGAP1-210ENST00000548158 KRTAP5-8O75690 187 aa1.68□□□□□ -2.14
RACGAP1-210ENST00000548158 KRTAP2-3P0C7H8 128 aa1.68□□□□□ -2.14
RACGAP1-210ENST00000548158 KRTAP2-4Q9BYR9 128 aa1.68□□□□□ -2.14
RACGAP1-210ENST00000548158 KRTAP2-1Q9BYU5 128 aa1.64□□□□□ -2.15
RACGAP1-210ENST00000548158 MT1AP04731 61 aa1.62□□□□□ -2.15
RACGAP1-210ENST00000548158 KRTAP20-1Q3LI63 56 aa1.62□□□□□ -2.15
RACGAP1-210ENST00000548158 KRTAP5-5Q701N2 237 aaPredicted RBP1.61□□□□□ -2.15
RACGAP1-210ENST00000548158 DSTQ03001 7570 aaKnown RBP1.53□□□□□ -2.17
RACGAP1-210ENST00000548158 KRTAP6-1Q3LI64 71 aa1.49□□□□□ -2.17
RACGAP1-210ENST00000548158 KRTAP20-2Q3LI61 65 aa1.45□□□□□ -2.18
RACGAP1-210ENST00000548158 HMCN1Q96RW7 5635 aa1.43□□□□□ -2.18
RACGAP1-210ENST00000548158 SYNE1Q8NF91 8797 aaKnown RBP1.43□□□□□ -2.18
RACGAP1-210ENST00000548158 MT4P47944 62 aa1.41□□□□□ -2.18
RACGAP1-210ENST00000548158 LCE1CQ5T751 118 aa1.41□□□□□ -2.18
RACGAP1-210ENST00000548158 LCE1BQ5T7P3 118 aa1.41□□□□□ -2.18
RACGAP1-210ENST00000548158 KRTAP6-2Q3LI66 62 aa1.4□□□□□ -2.19
RACGAP1-210ENST00000548158 GPR98Q8WXG9 6306 aa1.27□□□□□ -2.21
RACGAP1-210ENST00000548158 AHNAK2Q8IVF2 5795 aa1.27□□□□□ -2.21
RACGAP1-210ENST00000548158 KRTAP5-7Q6L8G8 165 aa1.25□□□□□ -2.21
RACGAP1-210ENST00000548158 KRTAP5-10Q6L8G5 202 aa1.23□□□□□ -2.21
RACGAP1-210ENST00000548158 PRM1P04553 51 aa1.22□□□□□ -2.21
RACGAP1-210ENST00000548158 MUC5ACP98088 5654 aa1.18□□□□□ -2.22
RACGAP1-210ENST00000548158 MUC19Q7Z5P9 8384 aa1.17□□□□□ -2.22
RACGAP1-210ENST00000548158 MUC5BQ9HC84 5762 aaPredicted RBP1.07□□□□□ -2.24
RACGAP1-210ENST00000548158 AHNAKQ09666 5890 aaKnown RBP1.07□□□□□ -2.24
RACGAP1-210ENST00000548158 KRTAP21-2Q3LI59 83 aa1.02□□□□□ -2.25
RACGAP1-210ENST00000548158 KRTAP21-1Q3LI58 79 aa0.99□□□□□ -2.25
RACGAP1-210ENST00000548158 PHGR1C9JFL3 82 aa0.91□□□□□ -2.26
RACGAP1-210ENST00000548158 MUC16Q8WXI7 14507 aa0.55□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 68 ms