RNA–Protein interactions for RNA: ENST00000547356.1

SMARCC2-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 741 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-204ENST00000547356 MT1MQ8N339 61 aa8.28□□□□□ -1.08
SMARCC2-204ENST00000547356 PP632Q6XCG6 107 aa8.25□□□□□ -1.09
SMARCC2-204ENST00000547356 Q1T7F1 81 aa8.21□□□□□ -1.1
SMARCC2-204ENST00000547356 V9GYY9 64 aa8.2□□□□□ -1.1
SMARCC2-204ENST00000547356 KRTAP4-3Q9BYR4 195 aa8.16□□□□□ -1.1
SMARCC2-204ENST00000547356 KRTAP12-3P60328 96 aa8.11□□□□□ -1.11
SMARCC2-204ENST00000547356 KRTAP4-9Q9BYQ8 210 aa8.11□□□□□ -1.11
SMARCC2-204ENST00000547356 K7ERS5 55 aa8.08□□□□□ -1.12
SMARCC2-204ENST00000547356 KRTAP25-1Q3LHN0 102 aa8.05□□□□□ -1.12
SMARCC2-204ENST00000547356 KRTAP4-7Q9BYR0 210 aa8.01□□□□□ -1.13
SMARCC2-204ENST00000547356 A6NED7 52 aa7.97□□□□□ -1.13
SMARCC2-204ENST00000547356 LCE1DQ5T752 114 aa7.91□□□□□ -1.14
SMARCC2-204ENST00000547356 PCP4P48539 62 aa7.89□□□□□ -1.15
SMARCC2-204ENST00000547356 LCE4AQ5TA78 99 aa7.87□□□□□ -1.15
SMARCC2-204ENST00000547356 MT4P47944 62 aa7.86□□□□□ -1.15
SMARCC2-204ENST00000547356 RPS28P62857 69 aaKnown RBP7.83□□□□□ -1.16
SMARCC2-204ENST00000547356 KRTAP5-4Q6L8H1 288 aa7.78□□□□□ -1.16
SMARCC2-204ENST00000547356 HMCN1Q96RW7 5635 aa7.73□□□□□ -1.17
SMARCC2-204ENST00000547356 CDC42SE1Q9NRR8 79 aa7.71□□□□□ -1.18
SMARCC2-204ENST00000547356 KRTAP23-1A1A580 65 aa7.7□□□□□ -1.18
SMARCC2-204ENST00000547356 AHNAK2Q8IVF2 5795 aa7.69□□□□□ -1.18
SMARCC2-204ENST00000547356 KRTAP4-6Q9BYQ5 205 aa7.66□□□□□ -1.18
SMARCC2-204ENST00000547356 ROMO1P60602 79 aa7.61□□□□□ -1.19
SMARCC2-204ENST00000547356 KRTAP15-1Q3LI76 137 aa7.61□□□□□ -1.19
SMARCC2-204ENST00000547356 KRTAP5-10Q6L8G5 202 aa7.61□□□□□ -1.19
SMARCC2-204ENST00000547356 LOC100996750A0A140TA64 210 aa7.58□□□□□ -1.2
SMARCC2-204ENST00000547356 KRTAP5-5Q701N2 237 aaPredicted RBP7.56□□□□□ -1.2
SMARCC2-204ENST00000547356 KRTAP19-4Q3LI73 84 aa7.49□□□□□ -1.21
SMARCC2-204ENST00000547356 LCE3CQ5T5A8 94 aa7.48□□□□□ -1.21
SMARCC2-204ENST00000547356 KRTAP5-7Q6L8G8 165 aa7.43□□□□□ -1.22
SMARCC2-204ENST00000547356 KRTAP20-2Q3LI61 65 aa7.36□□□□□ -1.23
SMARCC2-204ENST00000547356 SPRR5A0A1B0GTR4 108 aa7.3□□□□□ -1.24
SMARCC2-204ENST00000547356 KRTAP12-4P60329 112 aa7.28□□□□□ -1.24
SMARCC2-204ENST00000547356 SYNE1Q8NF91 8797 aaKnown RBP7.24□□□□□ -1.25
SMARCC2-204ENST00000547356 KRTAP5-3Q6L8H2 238 aa7.21□□□□□ -1.26
SMARCC2-204ENST00000547356 KRTAP9-6A8MVA2 160 aa7.13□□□□□ -1.27
SMARCC2-204ENST00000547356 MT1AP04731 61 aa7.08□□□□□ -1.28
SMARCC2-204ENST00000547356 KRTAP6-1Q3LI64 71 aa7.07□□□□□ -1.28
SMARCC2-204ENST00000547356 BRK1Q8WUW1 75 aa6.96□□□□□ -1.3
SMARCC2-204ENST00000547356 KRTAP5-2Q701N4 177 aa6.85□□□□□ -1.31
SMARCC2-204ENST00000547356 KRTAP9-4Q9BYQ2 154 aa6.82□□□□□ -1.32
SMARCC2-204ENST00000547356 KRTAP6-2Q3LI66 62 aa6.72□□□□□ -1.33
SMARCC2-204ENST00000547356 KRTAP4-11Q9BYQ6 195 aa6.67□□□□□ -1.34
SMARCC2-204ENST00000547356 AHNAKQ09666 5890 aaKnown RBP6.61□□□□□ -1.35
SMARCC2-204ENST00000547356 PMAIP1Q13794 54 aa6.51□□□□□ -1.37
SMARCC2-204ENST00000547356 MUC5ACP98088 5654 aa6.48□□□□□ -1.37
SMARCC2-204ENST00000547356 KRTAP5-8O75690 187 aa6.46□□□□□ -1.38
SMARCC2-204ENST00000547356 MUC5BQ9HC84 5762 aaPredicted RBP6.46□□□□□ -1.38
SMARCC2-204ENST00000547356 MT3P25713 68 aa6.44□□□□□ -1.38
SMARCC2-204ENST00000547356 PRAC1Q96KF2 57 aa6.37□□□□□ -1.39
SMARCC2-204ENST00000547356 OBSCNQ5VST9 7968 aa6.34□□□□□ -1.4
SMARCC2-204ENST00000547356 KRTAP5-1Q6L8H4 278 aa6.13□□□□□ -1.43
SMARCC2-204ENST00000547356 KRTAP9-9Q9BYP9 154 aa6.06□□□□□ -1.44
SMARCC2-204ENST00000547356 PRO0628Q9UI54 55 aa6.05□□□□□ -1.44
SMARCC2-204ENST00000547356 LCE1EQ5T753 118 aa5.85□□□□□ -1.47
SMARCC2-204ENST00000547356 KTN1-AS1Q86SY8 53 aa5.8□□□□□ -1.48
SMARCC2-204ENST00000547356 SVIPQ8NHG7 77 aa5.61□□□□□ -1.51
SMARCC2-204ENST00000547356 LCE1BQ5T7P3 118 aa5.6□□□□□ -1.51
SMARCC2-204ENST00000547356 KRTAP4-2Q9BYR5 136 aa5.6□□□□□ -1.51
SMARCC2-204ENST00000547356 KRTAP4-12Q9BQ66 201 aa5.51□□□□□ -1.53
SMARCC2-204ENST00000547356 H3BS24 57 aa5.46□□□□□ -1.54
SMARCC2-204ENST00000547356 LCE1CQ5T751 118 aa5.44□□□□□ -1.54
SMARCC2-204ENST00000547356 LCE3DQ9BYE3 92 aa5.4□□□□□ -1.54
SMARCC2-204ENST00000547356 LUZP6Q538Z0 58 aa5.22□□□□□ -1.57
SMARCC2-204ENST00000547356 LCE3EQ5T5B0 92 aa5.1□□□□□ -1.59
SMARCC2-204ENST00000547356 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.96□□□□□ -1.62
SMARCC2-204ENST00000547356 KRTAP5-11Q6L8G4 156 aa4.93□□□□□ -1.62
SMARCC2-204ENST00000547356 LCE1FQ5T754 118 aa4.71□□□□□ -1.66
SMARCC2-204ENST00000547356 KRTAP21-2Q3LI59 83 aa4.64□□□□□ -1.67
SMARCC2-204ENST00000547356 PHGR1C9JFL3 82 aa4.49□□□□□ -1.69
SMARCC2-204ENST00000547356 NDUFAF8A1L188 74 aa4.31□□□□□ -1.72
SMARCC2-204ENST00000547356 KRTAP4-4Q9BYR3 166 aa4.3□□□□□ -1.72
SMARCC2-204ENST00000547356 PRM1P04553 51 aa3.94□□□□□ -1.78
SMARCC2-204ENST00000547356 MUC19Q7Z5P9 8384 aa3.9□□□□□ -1.79
SMARCC2-204ENST00000547356 KRTAP21-1Q3LI58 79 aa3.38□□□□□ -1.87
SMARCC2-204ENST00000547356 INE1O15225 51 aa3.36□□□□□ -1.87
SMARCC2-204ENST00000547356 A0A0A0MQY5 61 aa3.29□□□□□ -1.88
SMARCC2-204ENST00000547356 MUC16Q8WXI7 14507 aa2.85□□□□□ -1.95
Retrieved 78 of 20,778 RNA–protein pairs in 66.7 ms