RNA–Protein interactions for RNA: ENST00000546961.1

SCN8A-204, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-204ENST00000546961 H7BZZ5 65 aa6.89□□□□□ -1.31
SCN8A-204ENST00000546961 SMIM26A0A096LP01 95 aa6.86□□□□□ -1.31
SCN8A-204ENST00000546961 TNP1P09430 55 aa6.86□□□□□ -1.31
SCN8A-204ENST00000546961 PCP4P48539 62 aa6.84□□□□□ -1.31
SCN8A-204ENST00000546961 A8MU10 97 aa6.83□□□□□ -1.32
SCN8A-204ENST00000546961 KRTAP4-7Q9BYR0 210 aa6.79□□□□□ -1.32
SCN8A-204ENST00000546961 A0A1B0GU69 56 aa6.77□□□□□ -1.33
SCN8A-204ENST00000546961 ATP5EP56381 51 aaPredicted RBP6.75□□□□□ -1.33
SCN8A-204ENST00000546961 KRTAP5-7Q6L8G8 165 aa6.75□□□□□ -1.33
SCN8A-204ENST00000546961 KRTAP5-3Q6L8H2 238 aa6.75□□□□□ -1.33
SCN8A-204ENST00000546961 TMEM258P61165 79 aa6.73□□□□□ -1.33
SCN8A-204ENST00000546961 KRTAP12-3P60328 96 aa6.67□□□□□ -1.34
SCN8A-204ENST00000546961 KRTAP20-2Q3LI61 65 aa6.65□□□□□ -1.34
SCN8A-204ENST00000546961 SPRR5A0A1B0GTR4 108 aa6.58□□□□□ -1.36
SCN8A-204ENST00000546961 KRTAP5-5Q701N2 237 aaPredicted RBP6.56□□□□□ -1.36
SCN8A-204ENST00000546961 KRTAP12-4P60329 112 aa6.54□□□□□ -1.36
SCN8A-204ENST00000546961 PRR15LQ9BU68 103 aa6.46□□□□□ -1.38
SCN8A-204ENST00000546961 LOC100996750A0A140TA64 210 aa6.44□□□□□ -1.38
SCN8A-204ENST00000546961 SYNE1Q8NF91 8797 aaKnown RBP6.43□□□□□ -1.38
SCN8A-204ENST00000546961 RPS28P62857 69 aaKnown RBP6.34□□□□□ -1.39
SCN8A-204ENST00000546961 LINC01558Q9Y6Z2 57 aa6.32□□□□□ -1.4
SCN8A-204ENST00000546961 KRTAP25-1Q3LHN0 102 aa6.27□□□□□ -1.41
SCN8A-204ENST00000546961 V9GYY9 64 aa6.25□□□□□ -1.41
SCN8A-204ENST00000546961 UQCR11O14957 56 aa6.23□□□□□ -1.41
SCN8A-204ENST00000546961 Q1T7F1 81 aa6.23□□□□□ -1.41
SCN8A-204ENST00000546961 KRTAP19-4Q3LI73 84 aa6.22□□□□□ -1.41
SCN8A-204ENST00000546961 KRTAP4-11Q9BYQ6 195 aa6.18□□□□□ -1.42
SCN8A-204ENST00000546961 KRTAP15-1Q3LI76 137 aa6.11□□□□□ -1.43
SCN8A-204ENST00000546961 LCE3CQ5T5A8 94 aa6.11□□□□□ -1.43
SCN8A-204ENST00000546961 PSPHP1O15172 72 aa6.1□□□□□ -1.43
SCN8A-204ENST00000546961 MIR22HGQ0VDD5 57 aa6.06□□□□□ -1.44
SCN8A-204ENST00000546961 KRTAP5-2Q701N4 177 aa6.06□□□□□ -1.44
SCN8A-204ENST00000546961 KRTAP6-1Q3LI64 71 aa6.04□□□□□ -1.44
SCN8A-204ENST00000546961 K7ERS5 55 aa6.03□□□□□ -1.44
SCN8A-204ENST00000546961 MT1AP04731 61 aa6.03□□□□□ -1.44
SCN8A-204ENST00000546961 KRTAP23-1A1A580 65 aa5.99□□□□□ -1.45
SCN8A-204ENST00000546961 AHNAKQ09666 5890 aaKnown RBP5.98□□□□□ -1.45
SCN8A-204ENST00000546961 KRTAP5-8O75690 187 aa5.96□□□□□ -1.46
SCN8A-204ENST00000546961 A6NED7 52 aa5.94□□□□□ -1.46
SCN8A-204ENST00000546961 KRTAP9-4Q9BYQ2 154 aa5.9□□□□□ -1.46
SCN8A-204ENST00000546961 MUC5ACP98088 5654 aa5.9□□□□□ -1.47
SCN8A-204ENST00000546961 MUC5BQ9HC84 5762 aaPredicted RBP5.89□□□□□ -1.47
SCN8A-204ENST00000546961 KRTAP6-2Q3LI66 62 aa5.85□□□□□ -1.47
SCN8A-204ENST00000546961 OBSCNQ5VST9 7968 aa5.83□□□□□ -1.48
SCN8A-204ENST00000546961 CDC42SE1Q9NRR8 79 aa5.82□□□□□ -1.48
SCN8A-204ENST00000546961 KRTAP9-6A8MVA2 160 aa5.77□□□□□ -1.49
SCN8A-204ENST00000546961 KRTAP9-9Q9BYP9 154 aa5.75□□□□□ -1.49
SCN8A-204ENST00000546961 SVIPQ8NHG7 77 aa5.71□□□□□ -1.5
SCN8A-204ENST00000546961 BRK1Q8WUW1 75 aa5.64□□□□□ -1.51
SCN8A-204ENST00000546961 MT3P25713 68 aa5.56□□□□□ -1.52
SCN8A-204ENST00000546961 PRO0628Q9UI54 55 aa5.55□□□□□ -1.52
SCN8A-204ENST00000546961 ROMO1P60602 79 aa5.54□□□□□ -1.52
SCN8A-204ENST00000546961 KRTAP5-1Q6L8H4 278 aa5.52□□□□□ -1.53
SCN8A-204ENST00000546961 PMAIP1Q13794 54 aa5.3□□□□□ -1.56
SCN8A-204ENST00000546961 LCE1EQ5T753 118 aa5.16□□□□□ -1.58
SCN8A-204ENST00000546961 KTN1-AS1Q86SY8 53 aa5.1□□□□□ -1.59
SCN8A-204ENST00000546961 PRAC1Q96KF2 57 aa5□□□□□ -1.61
SCN8A-204ENST00000546961 LCE1BQ5T7P3 118 aa4.95□□□□□ -1.62
SCN8A-204ENST00000546961 KRTAP4-2Q9BYR5 136 aa4.91□□□□□ -1.62
SCN8A-204ENST00000546961 LCE1CQ5T751 118 aa4.79□□□□□ -1.64
SCN8A-204ENST00000546961 KRTAP4-12Q9BQ66 201 aa4.65□□□□□ -1.67
SCN8A-204ENST00000546961 KRTAP5-11Q6L8G4 156 aa4.34□□□□□ -1.71
SCN8A-204ENST00000546961 LCE3DQ9BYE3 92 aa4.34□□□□□ -1.71
SCN8A-204ENST00000546961 LCE1FQ5T754 118 aa4.32□□□□□ -1.72
SCN8A-204ENST00000546961 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.29□□□□□ -1.72
SCN8A-204ENST00000546961 LUZP6Q538Z0 58 aa4.14□□□□□ -1.75
SCN8A-204ENST00000546961 PHGR1C9JFL3 82 aa4.1□□□□□ -1.75
SCN8A-204ENST00000546961 LCE3EQ5T5B0 92 aa4.02□□□□□ -1.77
SCN8A-204ENST00000546961 NDUFAF8A1L188 74 aa4□□□□□ -1.77
SCN8A-204ENST00000546961 H3BS24 57 aa3.99□□□□□ -1.77
SCN8A-204ENST00000546961 KRTAP21-2Q3LI59 83 aa3.97□□□□□ -1.77
SCN8A-204ENST00000546961 KRTAP4-4Q9BYR3 166 aa3.76□□□□□ -1.81
SCN8A-204ENST00000546961 A0A0A0MQY5 61 aa3.71□□□□□ -1.82
SCN8A-204ENST00000546961 MUC19Q7Z5P9 8384 aa3.64□□□□□ -1.83
SCN8A-204ENST00000546961 INE1O15225 51 aa3.4□□□□□ -1.87
SCN8A-204ENST00000546961 KRTAP21-1Q3LI58 79 aa3.1□□□□□ -1.91
SCN8A-204ENST00000546961 PRM1P04553 51 aa2.82□□□□□ -1.96
SCN8A-204ENST00000546961 MUC16Q8WXI7 14507 aa2.52□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 58 ms