RNA–Protein interactions for RNA: ENST00000546942.1

SRSF9-202, Transcript of serine and arginine rich splicing factor 9, humanhuman

TSL 1 (best)

Gene SRSF9, Length 946 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF9-202ENST00000546942 PCP4P48539 62 aa9.45□□□□□ -0.9
SRSF9-202ENST00000546942 PP632Q6XCG6 107 aa9.45□□□□□ -0.9
SRSF9-202ENST00000546942 LCE3AQ5TA76 89 aa9.43□□□□□ -0.9
SRSF9-202ENST00000546942 K7ERS5 55 aa9.42□□□□□ -0.9
SRSF9-202ENST00000546942 RPS28P62857 69 aaKnown RBP9.41□□□□□ -0.9
SRSF9-202ENST00000546942 MT1LQ93083 61 aa9.39□□□□□ -0.91
SRSF9-202ENST00000546942 MT1MQ8N339 61 aa9.38□□□□□ -0.91
SRSF9-202ENST00000546942 A6NED7 52 aa9.24□□□□□ -0.93
SRSF9-202ENST00000546942 KRTAP4-3Q9BYR4 195 aa9.22□□□□□ -0.93
SRSF9-202ENST00000546942 KRTAP25-1Q3LHN0 102 aa9.2□□□□□ -0.94
SRSF9-202ENST00000546942 LCE1DQ5T752 114 aa9.2□□□□□ -0.94
SRSF9-202ENST00000546942 GPR98Q8WXG9 6306 aa9.14□□□□□ -0.95
SRSF9-202ENST00000546942 MT4P47944 62 aa9.14□□□□□ -0.95
SRSF9-202ENST00000546942 LCE4AQ5TA78 99 aa9.13□□□□□ -0.95
SRSF9-202ENST00000546942 KRTAP12-3P60328 96 aa9.06□□□□□ -0.96
SRSF9-202ENST00000546942 HMCN1Q96RW7 5635 aa9.04□□□□□ -0.96
SRSF9-202ENST00000546942 KRTAP4-7Q9BYR0 210 aa8.99□□□□□ -0.97
SRSF9-202ENST00000546942 KRTAP23-1A1A580 65 aa8.93□□□□□ -0.98
SRSF9-202ENST00000546942 KRTAP5-4Q6L8H1 288 aa8.92□□□□□ -0.98
SRSF9-202ENST00000546942 CDC42SE1Q9NRR8 79 aa8.91□□□□□ -0.98
SRSF9-202ENST00000546942 KRTAP4-6Q9BYQ5 205 aa8.84□□□□□ -0.99
SRSF9-202ENST00000546942 ROMO1P60602 79 aa8.77□□□□□ -1.01
SRSF9-202ENST00000546942 AHNAK2Q8IVF2 5795 aa8.73□□□□□ -1.01
SRSF9-202ENST00000546942 KRTAP19-4Q3LI73 84 aa8.72□□□□□ -1.01
SRSF9-202ENST00000546942 KRTAP5-5Q701N2 237 aaPredicted RBP8.56□□□□□ -1.04
SRSF9-202ENST00000546942 KRTAP15-1Q3LI76 137 aa8.54□□□□□ -1.04
SRSF9-202ENST00000546942 KRTAP5-10Q6L8G5 202 aa8.54□□□□□ -1.04
SRSF9-202ENST00000546942 LOC100996750A0A140TA64 210 aa8.53□□□□□ -1.04
SRSF9-202ENST00000546942 KRTAP20-2Q3LI61 65 aa8.47□□□□□ -1.05
SRSF9-202ENST00000546942 KRTAP12-4P60329 112 aa8.4□□□□□ -1.06
SRSF9-202ENST00000546942 SPRR5A0A1B0GTR4 108 aa8.38□□□□□ -1.07
SRSF9-202ENST00000546942 LCE3CQ5T5A8 94 aa8.34□□□□□ -1.07
SRSF9-202ENST00000546942 KRTAP5-3Q6L8H2 238 aa8.34□□□□□ -1.07
SRSF9-202ENST00000546942 SYNE1Q8NF91 8797 aaKnown RBP8.25□□□□□ -1.09
SRSF9-202ENST00000546942 BRK1Q8WUW1 75 aa8.21□□□□□ -1.1
SRSF9-202ENST00000546942 KRTAP5-7Q6L8G8 165 aa8.2□□□□□ -1.1
SRSF9-202ENST00000546942 MT1AP04731 61 aa7.97□□□□□ -1.13
SRSF9-202ENST00000546942 KRTAP6-1Q3LI64 71 aa7.97□□□□□ -1.13
SRSF9-202ENST00000546942 KRTAP9-6A8MVA2 160 aa7.87□□□□□ -1.15
SRSF9-202ENST00000546942 KRTAP5-2Q701N4 177 aa7.8□□□□□ -1.16
SRSF9-202ENST00000546942 PMAIP1Q13794 54 aa7.77□□□□□ -1.17
SRSF9-202ENST00000546942 KRTAP4-11Q9BYQ6 195 aa7.75□□□□□ -1.17
SRSF9-202ENST00000546942 KRTAP9-4Q9BYQ2 154 aa7.73□□□□□ -1.17
SRSF9-202ENST00000546942 KRTAP6-2Q3LI66 62 aa7.64□□□□□ -1.19
SRSF9-202ENST00000546942 KRTAP5-8O75690 187 aa7.48□□□□□ -1.21
SRSF9-202ENST00000546942 PRO0628Q9UI54 55 aa7.44□□□□□ -1.22
SRSF9-202ENST00000546942 OBSCNQ5VST9 7968 aa7.34□□□□□ -1.24
SRSF9-202ENST00000546942 PRAC1Q96KF2 57 aa7.32□□□□□ -1.24
SRSF9-202ENST00000546942 MT3P25713 68 aa7.31□□□□□ -1.24
SRSF9-202ENST00000546942 MUC5BQ9HC84 5762 aaPredicted RBP7.18□□□□□ -1.26
SRSF9-202ENST00000546942 AHNAKQ09666 5890 aaKnown RBP7.16□□□□□ -1.26
SRSF9-202ENST00000546942 MUC5ACP98088 5654 aa7.15□□□□□ -1.27
SRSF9-202ENST00000546942 KRTAP9-9Q9BYP9 154 aa7.14□□□□□ -1.27
SRSF9-202ENST00000546942 KTN1-AS1Q86SY8 53 aa7.05□□□□□ -1.28
SRSF9-202ENST00000546942 KRTAP5-1Q6L8H4 278 aa7.03□□□□□ -1.28
SRSF9-202ENST00000546942 LCE1EQ5T753 118 aa6.67□□□□□ -1.34
SRSF9-202ENST00000546942 SVIPQ8NHG7 77 aa6.67□□□□□ -1.34
SRSF9-202ENST00000546942 LCE1BQ5T7P3 118 aa6.41□□□□□ -1.38
SRSF9-202ENST00000546942 KRTAP4-2Q9BYR5 136 aa6.35□□□□□ -1.39
SRSF9-202ENST00000546942 LUZP6Q538Z0 58 aa6.3□□□□□ -1.4
SRSF9-202ENST00000546942 LCE1CQ5T751 118 aa6.21□□□□□ -1.42
SRSF9-202ENST00000546942 LCE3DQ9BYE3 92 aa6.09□□□□□ -1.43
SRSF9-202ENST00000546942 KRTAP4-12Q9BQ66 201 aa5.87□□□□□ -1.47
SRSF9-202ENST00000546942 LCE3EQ5T5B0 92 aa5.78□□□□□ -1.48
SRSF9-202ENST00000546942 KRTAP5-11Q6L8G4 156 aa5.62□□□□□ -1.51
SRSF9-202ENST00000546942 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.61□□□□□ -1.51
SRSF9-202ENST00000546942 LCE1FQ5T754 118 aa5.47□□□□□ -1.53
SRSF9-202ENST00000546942 H3BS24 57 aa5.37□□□□□ -1.55
SRSF9-202ENST00000546942 KRTAP21-2Q3LI59 83 aa5.23□□□□□ -1.57
SRSF9-202ENST00000546942 NDUFAF8A1L188 74 aa5.18□□□□□ -1.58
SRSF9-202ENST00000546942 PHGR1C9JFL3 82 aa5.02□□□□□ -1.61
SRSF9-202ENST00000546942 KRTAP4-4Q9BYR3 166 aa4.89□□□□□ -1.63
SRSF9-202ENST00000546942 MUC19Q7Z5P9 8384 aa4.54□□□□□ -1.68
SRSF9-202ENST00000546942 PRM1P04553 51 aa4.45□□□□□ -1.7
SRSF9-202ENST00000546942 INE1O15225 51 aa4.32□□□□□ -1.72
SRSF9-202ENST00000546942 A0A0A0MQY5 61 aa4.31□□□□□ -1.72
SRSF9-202ENST00000546942 KRTAP21-1Q3LI58 79 aa3.77□□□□□ -1.81
SRSF9-202ENST00000546942 MUC16Q8WXI7 14507 aa3.19□□□□□ -1.9
Retrieved 78 of 20,778 RNA–protein pairs in 88.2 ms