RNA–Protein interactions for RNA: ENST00000546882.5

RFX4-207, Transcript of regulatory factor X4, humanhuman

TSL 3

Gene RFX4, Length 660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-207ENST00000546882 LCA10Q71F78 164 aa3.49□□□□□ -1.85
RFX4-207ENST00000546882 CRIPTQ9P021 101 aa3.49□□□□□ -1.85
RFX4-207ENST00000546882 S4R3F8 94 aa3.49□□□□□ -1.85
RFX4-207ENST00000546882 KRTAP5-10Q6L8G5 202 aa3.47□□□□□ -1.85
RFX4-207ENST00000546882 PRR15LQ9BU68 103 aa3.47□□□□□ -1.85
RFX4-207ENST00000546882 KRTAP4-4Q9BYR3 166 aa3.46□□□□□ -1.86
RFX4-207ENST00000546882 LINC01558Q9Y6Z2 57 aa3.46□□□□□ -1.86
RFX4-207ENST00000546882 SEC61GP60059 68 aa3.45□□□□□ -1.86
RFX4-207ENST00000546882 KRTAP5-4Q6L8H1 288 aa3.43□□□□□ -1.86
RFX4-207ENST00000546882 A0A1B0GU69 56 aa3.41□□□□□ -1.86
RFX4-207ENST00000546882 LCE3EQ5T5B0 92 aa3.4□□□□□ -1.87
RFX4-207ENST00000546882 KRTAP5-7Q6L8G8 165 aa3.39□□□□□ -1.87
RFX4-207ENST00000546882 H0YAA0 97 aa3.37□□□□□ -1.87
RFX4-207ENST00000546882 PSPHP1O15172 72 aa3.36□□□□□ -1.87
RFX4-207ENST00000546882 PLAC4Q8WY50 150 aa3.36□□□□□ -1.87
RFX4-207ENST00000546882 MT4P47944 62 aa3.35□□□□□ -1.87
RFX4-207ENST00000546882 UQCR11O14957 56 aa3.34□□□□□ -1.87
RFX4-207ENST00000546882 A6NED7 52 aa3.32□□□□□ -1.88
RFX4-207ENST00000546882 A0A1B0GU33 70 aa3.29□□□□□ -1.88
RFX4-207ENST00000546882 CDC42SE1Q9NRR8 79 aa3.29□□□□□ -1.88
RFX4-207ENST00000546882 A8MU10 97 aa3.27□□□□□ -1.89
RFX4-207ENST00000546882 M0QZ58 72 aa3.27□□□□□ -1.89
RFX4-207ENST00000546882 BRK1Q8WUW1 75 aa3.27□□□□□ -1.89
RFX4-207ENST00000546882 MIR22HGQ0VDD5 57 aa3.26□□□□□ -1.89
RFX4-207ENST00000546882 SPATA8Q6RVD6 105 aa3.26□□□□□ -1.89
RFX4-207ENST00000546882 ADM2Q7Z4H4 148 aa3.26□□□□□ -1.89
RFX4-207ENST00000546882 PRO0628Q9UI54 55 aa3.26□□□□□ -1.89
RFX4-207ENST00000546882 SPRR5A0A1B0GTR4 108 aa3.24□□□□□ -1.89
RFX4-207ENST00000546882 KRTAP19-3Q7Z4W3 81 aa3.24□□□□□ -1.89
RFX4-207ENST00000546882 KRTAP19-7Q3SYF9 63 aa3.22□□□□□ -1.89
RFX4-207ENST00000546882 K7ERS5 55 aa3.21□□□□□ -1.9
RFX4-207ENST00000546882 P0C880 135 aa3.21□□□□□ -1.9
RFX4-207ENST00000546882 R4GN34 69 aa3.2□□□□□ -1.9
RFX4-207ENST00000546882 MT1EP04732 61 aa3.19□□□□□ -1.9
RFX4-207ENST00000546882 LCE3AQ5TA76 89 aa3.18□□□□□ -1.9
RFX4-207ENST00000546882 KRTAP13-4Q3LI77 160 aa3.12□□□□□ -1.91
RFX4-207ENST00000546882 MT1GP13640 62 aa3.11□□□□□ -1.91
RFX4-207ENST00000546882 PMAIP1Q13794 54 aa3.11□□□□□ -1.91
RFX4-207ENST00000546882 LINC01554Q52M75 96 aa3.11□□□□□ -1.91
RFX4-207ENST00000546882 KRTAP4-3Q9BYR4 195 aa3.1□□□□□ -1.91
RFX4-207ENST00000546882 OBSCNQ5VST9 7968 aa3.1□□□□□ -1.91
RFX4-207ENST00000546882 A0A0D9SG42 100 aa3.09□□□□□ -1.91
RFX4-207ENST00000546882 MT1MQ8N339 61 aa3.07□□□□□ -1.92
RFX4-207ENST00000546882 AHNAKQ09666 5890 aaKnown RBP3.06□□□□□ -1.92
RFX4-207ENST00000546882 KRTAP12-1P59990 96 aa3.06□□□□□ -1.92
RFX4-207ENST00000546882 KRTAP20-2Q3LI61 65 aa3.05□□□□□ -1.92
RFX4-207ENST00000546882 PP632Q6XCG6 107 aa3.05□□□□□ -1.92
RFX4-207ENST00000546882 SPINT4Q6UDR6 99 aa3.03□□□□□ -1.92
RFX4-207ENST00000546882 MUC5BQ9HC84 5762 aaPredicted RBP3.01□□□□□ -1.93
RFX4-207ENST00000546882 KTN1-AS1Q86SY8 53 aa3.01□□□□□ -1.93
RFX4-207ENST00000546882 ROMO1P60602 79 aa3□□□□□ -1.93
RFX4-207ENST00000546882 MUC5ACP98088 5654 aa3□□□□□ -1.93
RFX4-207ENST00000546882 CAMK2N1Q7Z7J9 78 aa2.99□□□□□ -1.93
RFX4-207ENST00000546882 KRTAP19-5Q3LI72 72 aa2.98□□□□□ -1.93
RFX4-207ENST00000546882 MT1LQ93083 61 aa2.97□□□□□ -1.93
RFX4-207ENST00000546882 KRTAP5-5Q701N2 237 aaPredicted RBP2.93□□□□□ -1.94
RFX4-207ENST00000546882 KRTAP25-1Q3LHN0 102 aa2.92□□□□□ -1.94
RFX4-207ENST00000546882 TNP1P09430 55 aa2.87□□□□□ -1.95
RFX4-207ENST00000546882 KRTAP12-4P60329 112 aa2.86□□□□□ -1.95
RFX4-207ENST00000546882 C10orf95Q9H7T3 257 aa2.86□□□□□ -1.95
RFX4-207ENST00000546882 SYNE1Q8NF91 8797 aaKnown RBP2.86□□□□□ -1.95
RFX4-207ENST00000546882 KRTAP5-8O75690 187 aa2.84□□□□□ -1.95
RFX4-207ENST00000546882 KRTAP5-2Q701N4 177 aa2.81□□□□□ -1.96
RFX4-207ENST00000546882 LCE3DQ9BYE3 92 aa2.75□□□□□ -1.97
RFX4-207ENST00000546882 LCE1CQ5T751 118 aa2.74□□□□□ -1.97
RFX4-207ENST00000546882 LCE1BQ5T7P3 118 aa2.74□□□□□ -1.97
RFX4-207ENST00000546882 KRTAP12-3P60328 96 aa2.6□□□□□ -1.99
RFX4-207ENST00000546882 KRTAP6-1Q3LI64 71 aa2.54□□□□□ -2
RFX4-207ENST00000546882 MT1AP04731 61 aa2.51□□□□□ -2.01
RFX4-207ENST00000546882 KRTAP6-2Q3LI66 62 aa2.51□□□□□ -2.01
RFX4-207ENST00000546882 LUZP6Q538Z0 58 aa2.45□□□□□ -2.02
RFX4-207ENST00000546882 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
RFX4-207ENST00000546882 PHGR1C9JFL3 82 aa2.01□□□□□ -2.09
RFX4-207ENST00000546882 INE1O15225 51 aa2□□□□□ -2.09
RFX4-207ENST00000546882 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
RFX4-207ENST00000546882 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
RFX4-207ENST00000546882 PRM1P04553 51 aa1.51□□□□□ -2.17
RFX4-207ENST00000546882 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 73.8 ms