RNA–Protein interactions for RNA: ENST00000546653.5

VDR-203, Transcript of vitamin D receptor, humanhuman

TSL 5

Gene VDR, Length 937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-203ENST00000546653 RPS28P62857 69 aaKnown RBP4.69□□□□□ -1.66
VDR-203ENST00000546653 MUC5ACP98088 5654 aa4.67□□□□□ -1.66
VDR-203ENST00000546653 SERP1Q9Y6X1 66 aa4.66□□□□□ -1.66
VDR-203ENST00000546653 MUC5BQ9HC84 5762 aaPredicted RBP4.65□□□□□ -1.66
VDR-203ENST00000546653 MT1LQ93083 61 aa4.64□□□□□ -1.67
VDR-203ENST00000546653 SPANXA2-OT1Q8N9U9 137 aa4.58□□□□□ -1.68
VDR-203ENST00000546653 SMIM26A0A096LP01 95 aa4.56□□□□□ -1.68
VDR-203ENST00000546653 SYNE1Q8NF91 8797 aaKnown RBP4.54□□□□□ -1.68
VDR-203ENST00000546653 SPINT4Q6UDR6 99 aa4.54□□□□□ -1.68
VDR-203ENST00000546653 SEC61GP60059 68 aa4.52□□□□□ -1.69
VDR-203ENST00000546653 KRTAP12-1P59990 96 aa4.51□□□□□ -1.69
VDR-203ENST00000546653 SPATA8Q6RVD6 105 aa4.51□□□□□ -1.69
VDR-203ENST00000546653 KRTAP5-5Q701N2 237 aaPredicted RBP4.48□□□□□ -1.69
VDR-203ENST00000546653 C10orf95Q9H7T3 257 aa4.48□□□□□ -1.69
VDR-203ENST00000546653 KRTAP4-11Q9BYQ6 195 aa4.47□□□□□ -1.69
VDR-203ENST00000546653 LCE3AQ5TA76 89 aa4.46□□□□□ -1.7
VDR-203ENST00000546653 A0A1B0GU33 70 aa4.45□□□□□ -1.7
VDR-203ENST00000546653 KRTAP12-4P60329 112 aa4.45□□□□□ -1.7
VDR-203ENST00000546653 V9GYY9 64 aa4.45□□□□□ -1.7
VDR-203ENST00000546653 COA5Q86WW8 74 aa4.43□□□□□ -1.7
VDR-203ENST00000546653 KRTAP4-7Q9BYR0 210 aa4.42□□□□□ -1.7
VDR-203ENST00000546653 Q1T7F1 81 aa4.41□□□□□ -1.7
VDR-203ENST00000546653 KRTAP5-8O75690 187 aa4.39□□□□□ -1.71
VDR-203ENST00000546653 TNP1P09430 55 aa4.37□□□□□ -1.71
VDR-203ENST00000546653 PRR15LQ9BU68 103 aa4.31□□□□□ -1.72
VDR-203ENST00000546653 PSPHP1O15172 72 aa4.3□□□□□ -1.72
VDR-203ENST00000546653 BRK1Q8WUW1 75 aa4.3□□□□□ -1.72
VDR-203ENST00000546653 LINC01558Q9Y6Z2 57 aa4.3□□□□□ -1.72
VDR-203ENST00000546653 KRTAP12-3P60328 96 aa4.29□□□□□ -1.72
VDR-203ENST00000546653 A8MU10 97 aa4.28□□□□□ -1.72
VDR-203ENST00000546653 PRO0628Q9UI54 55 aa4.28□□□□□ -1.72
VDR-203ENST00000546653 OBSCNQ5VST9 7968 aa4.28□□□□□ -1.72
VDR-203ENST00000546653 A0A1B0GU69 56 aa4.24□□□□□ -1.73
VDR-203ENST00000546653 KRTAP5-2Q701N4 177 aa4.24□□□□□ -1.73
VDR-203ENST00000546653 A6NED7 52 aa4.22□□□□□ -1.73
VDR-203ENST00000546653 KRTAP9-9Q9BYP9 154 aa4.2□□□□□ -1.74
VDR-203ENST00000546653 CDC42SE1Q9NRR8 79 aa4.16□□□□□ -1.74
VDR-203ENST00000546653 UQCR11O14957 56 aa4.11□□□□□ -1.75
VDR-203ENST00000546653 KRTAP19-4Q3LI73 84 aa4.08□□□□□ -1.76
VDR-203ENST00000546653 MIR22HGQ0VDD5 57 aa4.07□□□□□ -1.76
VDR-203ENST00000546653 H3BS24 57 aa4.06□□□□□ -1.76
VDR-203ENST00000546653 PMAIP1Q13794 54 aa4.05□□□□□ -1.76
VDR-203ENST00000546653 KRTAP25-1Q3LHN0 102 aa3.98□□□□□ -1.77
VDR-203ENST00000546653 A0A0A0MQY5 61 aa3.97□□□□□ -1.77
VDR-203ENST00000546653 KRTAP6-1Q3LI64 71 aa3.97□□□□□ -1.77
VDR-203ENST00000546653 KTN1-AS1Q86SY8 53 aa3.96□□□□□ -1.78
VDR-203ENST00000546653 K7ERS5 55 aa3.95□□□□□ -1.78
VDR-203ENST00000546653 MT1AP04731 61 aa3.95□□□□□ -1.78
VDR-203ENST00000546653 KRTAP4-12Q9BQ66 201 aa3.95□□□□□ -1.78
VDR-203ENST00000546653 LCE3CQ5T5A8 94 aa3.94□□□□□ -1.78
VDR-203ENST00000546653 KRTAP9-4Q9BYQ2 154 aa3.94□□□□□ -1.78
VDR-203ENST00000546653 KRTAP5-1Q6L8H4 278 aa3.93□□□□□ -1.78
VDR-203ENST00000546653 KRTAP6-2Q3LI66 62 aa3.91□□□□□ -1.78
VDR-203ENST00000546653 KRTAP15-1Q3LI76 137 aa3.91□□□□□ -1.78
VDR-203ENST00000546653 KRTAP23-1A1A580 65 aa3.85□□□□□ -1.79
VDR-203ENST00000546653 PRAC1Q96KF2 57 aa3.74□□□□□ -1.81
VDR-203ENST00000546653 KRTAP9-6A8MVA2 160 aa3.72□□□□□ -1.81
VDR-203ENST00000546653 ROMO1P60602 79 aa3.72□□□□□ -1.81
VDR-203ENST00000546653 KRTAP4-2Q9BYR5 136 aa3.65□□□□□ -1.83
VDR-203ENST00000546653 MT3P25713 68 aa3.63□□□□□ -1.83
VDR-203ENST00000546653 LCE1EQ5T753 118 aa3.47□□□□□ -1.85
VDR-203ENST00000546653 LCE1BQ5T7P3 118 aa3.33□□□□□ -1.88
VDR-203ENST00000546653 LUZP6Q538Z0 58 aa3.31□□□□□ -1.88
VDR-203ENST00000546653 LCE1CQ5T751 118 aa3.23□□□□□ -1.89
VDR-203ENST00000546653 KRTAP5-11Q6L8G4 156 aa3.16□□□□□ -1.9
VDR-203ENST00000546653 PHGR1C9JFL3 82 aa3.11□□□□□ -1.91
VDR-203ENST00000546653 NDUFAF8A1L188 74 aa3.09□□□□□ -1.91
VDR-203ENST00000546653 LCE1FQ5T754 118 aa3.05□□□□□ -1.92
VDR-203ENST00000546653 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.87□□□□□ -1.95
VDR-203ENST00000546653 LCE3DQ9BYE3 92 aa2.77□□□□□ -1.97
VDR-203ENST00000546653 INE1O15225 51 aa2.71□□□□□ -1.98
VDR-203ENST00000546653 MUC19Q7Z5P9 8384 aa2.7□□□□□ -1.98
VDR-203ENST00000546653 KRTAP21-2Q3LI59 83 aa2.64□□□□□ -1.99
VDR-203ENST00000546653 LCE3EQ5T5B0 92 aa2.55□□□□□ -2
VDR-203ENST00000546653 KRTAP4-4Q9BYR3 166 aa2.52□□□□□ -2.01
VDR-203ENST00000546653 KRTAP21-1Q3LI58 79 aa2.36□□□□□ -2.03
VDR-203ENST00000546653 PRM1P04553 51 aa1.95□□□□□ -2.1
VDR-203ENST00000546653 MUC16Q8WXI7 14507 aa1.85□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 51.1 ms