RNA–Protein interactions for RNA: ENST00000546483.1

ATXN2-216, Transcript of ataxin 2, humanhuman

TSL 2

Gene ATXN2, Length 2,098 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-216ENST00000546483 KRTAP10-5P60370 271 aa4.73□□□□□ -1.65
ATXN2-216ENST00000546483 MT1XP80297 61 aa4.71□□□□□ -1.66
ATXN2-216ENST00000546483 MT1BP07438 61 aa4.67□□□□□ -1.66
ATXN2-216ENST00000546483 USH2AO75445 5202 aa4.65□□□□□ -1.66
ATXN2-216ENST00000546483 KRTAP5-3Q6L8H2 238 aa4.61□□□□□ -1.67
ATXN2-216ENST00000546483 FSIP2Q5CZC0 6907 aa4.59□□□□□ -1.67
ATXN2-216ENST00000546483 KRTAP10-7P60409 375 aaPredicted RBP4.56□□□□□ -1.68
ATXN2-216ENST00000546483 SSPOA2VEC9 5147 aa4.53□□□□□ -1.68
ATXN2-216ENST00000546483 LCE3CQ5T5A8 94 aa4.52□□□□□ -1.69
ATXN2-216ENST00000546483 KRTAP19-6Q3LI70 58 aa4.44□□□□□ -1.7
ATXN2-216ENST00000546483 KRTAP19-5Q3LI72 72 aa4.42□□□□□ -1.7
ATXN2-216ENST00000546483 CRCT1Q9UGL9 99 aa4.42□□□□□ -1.7
ATXN2-216ENST00000546483 KRTAP2-3P0C7H8 128 aa4.41□□□□□ -1.7
ATXN2-216ENST00000546483 KRTAP2-4Q9BYR9 128 aa4.41□□□□□ -1.7
ATXN2-216ENST00000546483 KRTAP2-1Q9BYU5 128 aa4.41□□□□□ -1.7
ATXN2-216ENST00000546483 FCGBPQ9Y6R7 5405 aaPredicted RBP4.37□□□□□ -1.71
ATXN2-216ENST00000546483 KRTAP9-6A8MVA2 160 aa4.36□□□□□ -1.71
ATXN2-216ENST00000546483 KRTAP19-7Q3SYF9 63 aa4.2□□□□□ -1.74
ATXN2-216ENST00000546483 MACF1Q9UPN3 7388 aaKnown RBP4.19□□□□□ -1.74
ATXN2-216ENST00000546483 KMT2DO14686 5537 aa4.17□□□□□ -1.74
ATXN2-216ENST00000546483 MT1LQ93083 61 aa4.1□□□□□ -1.75
ATXN2-216ENST00000546483 SYNE2Q8WXH0 6885 aaKnown RBP4.09□□□□□ -1.75
ATXN2-216ENST00000546483 MT1EP04732 61 aa4.06□□□□□ -1.76
ATXN2-216ENST00000546483 LCE1AQ5T7P2 110 aa4.01□□□□□ -1.77
ATXN2-216ENST00000546483 MT3P25713 68 aa3.98□□□□□ -1.77
ATXN2-216ENST00000546483 KRTAP6-3Q3LI67 103 aa3.95□□□□□ -1.78
ATXN2-216ENST00000546483 SPRR2FQ96RM1 72 aa3.94□□□□□ -1.78
ATXN2-216ENST00000546483 KRTAP5-9P26371 169 aa3.93□□□□□ -1.78
ATXN2-216ENST00000546483 MUC12Q9UKN1 5478 aa3.92□□□□□ -1.78
ATXN2-216ENST00000546483 LCE1FQ5T754 118 aa3.9□□□□□ -1.78
ATXN2-216ENST00000546483 MDN1Q9NU22 5596 aa3.88□□□□□ -1.79
ATXN2-216ENST00000546483 KRTAP12-4P60329 112 aa3.87□□□□□ -1.79
ATXN2-216ENST00000546483 KRTAP2-2Q9BYT5 123 aa3.87□□□□□ -1.79
ATXN2-216ENST00000546483 SPRR2EP22531 72 aa3.79□□□□□ -1.8
ATXN2-216ENST00000546483 SPRR2BP35325 72 aa3.79□□□□□ -1.8
ATXN2-216ENST00000546483 SPRR2AP35326 72 aa3.79□□□□□ -1.8
ATXN2-216ENST00000546483 NEBP20929 6669 aa3.77□□□□□ -1.81
ATXN2-216ENST00000546483 MT1GP13640 62 aa3.77□□□□□ -1.81
ATXN2-216ENST00000546483 KRTAP19-3Q7Z4W3 81 aa3.77□□□□□ -1.81
ATXN2-216ENST00000546483 MT1MQ8N339 61 aa3.76□□□□□ -1.81
ATXN2-216ENST00000546483 KRTAP4-3Q9BYR4 195 aa3.75□□□□□ -1.81
ATXN2-216ENST00000546483 MT1AP04731 61 aa3.69□□□□□ -1.82
ATXN2-216ENST00000546483 SPRR2DP22532 72 aa3.65□□□□□ -1.83
ATXN2-216ENST00000546483 DSTQ03001 7570 aaKnown RBP3.58□□□□□ -1.84
ATXN2-216ENST00000546483 LCE3EQ5T5B0 92 aa3.51□□□□□ -1.85
ATXN2-216ENST00000546483 KRTAP5-5Q701N2 237 aaPredicted RBP3.51□□□□□ -1.85
ATXN2-216ENST00000546483 LCE3DQ9BYE3 92 aa3.51□□□□□ -1.85
ATXN2-216ENST00000546483 KRTAP20-1Q3LI63 56 aa3.48□□□□□ -1.85
ATXN2-216ENST00000546483 PRM1P04553 51 aa3.45□□□□□ -1.86
ATXN2-216ENST00000546483 KRTAP6-1Q3LI64 71 aa3.45□□□□□ -1.86
ATXN2-216ENST00000546483 SYNE1Q8NF91 8797 aaKnown RBP3.44□□□□□ -1.86
ATXN2-216ENST00000546483 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.42□□□□□ -1.86
ATXN2-216ENST00000546483 KRTAP5-11Q6L8G4 156 aa3.32□□□□□ -1.88
ATXN2-216ENST00000546483 KRTAP6-2Q3LI66 62 aa3.28□□□□□ -1.89
ATXN2-216ENST00000546483 LCE1EQ5T753 118 aa3.26□□□□□ -1.89
ATXN2-216ENST00000546483 KRTAP5-4Q6L8H1 288 aa3.24□□□□□ -1.89
ATXN2-216ENST00000546483 MT4P47944 62 aa3.16□□□□□ -1.9
ATXN2-216ENST00000546483 HMCN1Q96RW7 5635 aa3.15□□□□□ -1.91
ATXN2-216ENST00000546483 KRTAP20-2Q3LI61 65 aa3.05□□□□□ -1.92
ATXN2-216ENST00000546483 KRTAP5-1Q6L8H4 278 aa2.96□□□□□ -1.94
ATXN2-216ENST00000546483 KRTAP5-2Q701N4 177 aa2.91□□□□□ -1.94
ATXN2-216ENST00000546483 AHNAK2Q8IVF2 5795 aa2.88□□□□□ -1.95
ATXN2-216ENST00000546483 KRTAP4-4Q9BYR3 166 aa2.84□□□□□ -1.95
ATXN2-216ENST00000546483 OBSCNQ5VST9 7968 aa2.83□□□□□ -1.96
ATXN2-216ENST00000546483 GPR98Q8WXG9 6306 aa2.81□□□□□ -1.96
ATXN2-216ENST00000546483 KRTAP5-10Q6L8G5 202 aa2.69□□□□□ -1.98
ATXN2-216ENST00000546483 MUC5ACP98088 5654 aa2.59□□□□□ -2
ATXN2-216ENST00000546483 KRTAP5-8O75690 187 aa2.57□□□□□ -2
ATXN2-216ENST00000546483 KRTAP5-7Q6L8G8 165 aa2.53□□□□□ -2
ATXN2-216ENST00000546483 LCE1BQ5T7P3 118 aa2.43□□□□□ -2.02
ATXN2-216ENST00000546483 LCE1CQ5T751 118 aa2.4□□□□□ -2.02
ATXN2-216ENST00000546483 MUC5BQ9HC84 5762 aaPredicted RBP2.34□□□□□ -2.04
ATXN2-216ENST00000546483 AHNAKQ09666 5890 aaKnown RBP2.31□□□□□ -2.04
ATXN2-216ENST00000546483 KRTAP21-1Q3LI58 79 aa2.29□□□□□ -2.04
ATXN2-216ENST00000546483 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
ATXN2-216ENST00000546483 MUC19Q7Z5P9 8384 aa1.9□□□□□ -2.1
ATXN2-216ENST00000546483 PHGR1C9JFL3 82 aa1.83□□□□□ -2.12
ATXN2-216ENST00000546483 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 103.1 ms