RNA–Protein interactions for RNA: ENST00000546253.5

SLC3A2-222, Transcript of solute carrier family 3 member 2, human

TSL 4

Gene SLC3A2, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC3A2-222	ENST00000546253	SERP1	Q9Y6X1	66 aa		4.82	□□□□□ -1.64
SLC3A2-222	ENST00000546253	SYNE1	Q8NF91	8797 aa	Known RBP	4.81	□□□□□ -1.64
SLC3A2-222	ENST00000546253	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.79	□□□□□ -1.64
SLC3A2-222	ENST00000546253	KRTAP12-3	P60328	96 aa		4.76	□□□□□ -1.65
SLC3A2-222	ENST00000546253		A0A1B0GU33	70 aa		4.73	□□□□□ -1.65
SLC3A2-222	ENST00000546253	KRTAP5-8	O75690	187 aa		4.71	□□□□□ -1.66
SLC3A2-222	ENST00000546253	LOC100996750	A0A140TA64	210 aa		4.7	□□□□□ -1.66
SLC3A2-222	ENST00000546253	SMIM20	Q8N5G0	67 aa		4.7	□□□□□ -1.66
SLC3A2-222	ENST00000546253	SPANXA2-OT1	Q8N9U9	137 aa		4.69	□□□□□ -1.66
SLC3A2-222	ENST00000546253	SNURF	Q9Y675	71 aa		4.66	□□□□□ -1.66
SLC3A2-222	ENST00000546253		K7ERU9	68 aa		4.65	□□□□□ -1.67
SLC3A2-222	ENST00000546253	SMIM26	A0A096LP01	95 aa		4.64	□□□□□ -1.67
SLC3A2-222	ENST00000546253	KRTAP5-2	Q701N4	177 aa		4.62	□□□□□ -1.67
SLC3A2-222	ENST00000546253	COA5	Q86WW8	74 aa		4.61	□□□□□ -1.67
SLC3A2-222	ENST00000546253	KRTAP9-9	Q9BYP9	154 aa		4.61	□□□□□ -1.67
SLC3A2-222	ENST00000546253		A8MU10	97 aa		4.54	□□□□□ -1.68
SLC3A2-222	ENST00000546253	OBSCN	Q5VST9	7968 aa		4.52	□□□□□ -1.69
SLC3A2-222	ENST00000546253	KRTAP19-4	Q3LI73	84 aa		4.47	□□□□□ -1.69
SLC3A2-222	ENST00000546253	SERP2	Q8N6R1	65 aa		4.47	□□□□□ -1.69
SLC3A2-222	ENST00000546253	MT1A	P04731	61 aa		4.45	□□□□□ -1.7
SLC3A2-222	ENST00000546253	KRTAP6-1	Q3LI64	71 aa		4.44	□□□□□ -1.7
SLC3A2-222	ENST00000546253		A0A1B0GU69	56 aa		4.42	□□□□□ -1.7
SLC3A2-222	ENST00000546253	KRTAP6-2	Q3LI66	62 aa		4.37	□□□□□ -1.71
SLC3A2-222	ENST00000546253	KRTAP25-1	Q3LHN0	102 aa		4.36	□□□□□ -1.71
SLC3A2-222	ENST00000546253	KRTAP9-4	Q9BYQ2	154 aa		4.36	□□□□□ -1.71
SLC3A2-222	ENST00000546253	COX7C	P15954	63 aa		4.33	□□□□□ -1.72
SLC3A2-222	ENST00000546253	LCE3C	Q5T5A8	94 aa		4.31	□□□□□ -1.72
SLC3A2-222	ENST00000546253		H7BZZ5	65 aa		4.26	□□□□□ -1.73
SLC3A2-222	ENST00000546253	KRTAP15-1	Q3LI76	137 aa		4.25	□□□□□ -1.73
SLC3A2-222	ENST00000546253	KRTAP5-1	Q6L8H4	278 aa		4.25	□□□□□ -1.73
SLC3A2-222	ENST00000546253	ANAPC13	Q9BS18	74 aa		4.18	□□□□□ -1.74
SLC3A2-222	ENST00000546253	PRR15L	Q9BU68	103 aa		4.18	□□□□□ -1.74
SLC3A2-222	ENST00000546253	MT3	P25713	68 aa		4.13	□□□□□ -1.75
SLC3A2-222	ENST00000546253	CCDC179	H3BU77	68 aa		4.12	□□□□□ -1.75
SLC3A2-222	ENST00000546253	KRTAP23-1	A1A580	65 aa		4.04	□□□□□ -1.76
SLC3A2-222	ENST00000546253	ATP5E	P56381	51 aa	Predicted RBP	4.03	□□□□□ -1.76
SLC3A2-222	ENST00000546253	KRTAP9-6	A8MVA2	160 aa		4.01	□□□□□ -1.77
SLC3A2-222	ENST00000546253	UQCR11	O14957	56 aa		3.97	□□□□□ -1.77
SLC3A2-222	ENST00000546253	LINC01558	Q9Y6Z2	57 aa		3.97	□□□□□ -1.77
SLC3A2-222	ENST00000546253		K7ERS5	55 aa		3.94	□□□□□ -1.78
SLC3A2-222	ENST00000546253	TMEM258	P61165	79 aa		3.94	□□□□□ -1.78
SLC3A2-222	ENST00000546253	LCE1E	Q5T753	118 aa		3.9	□□□□□ -1.79
SLC3A2-222	ENST00000546253	MIR22HG	Q0VDD5	57 aa		3.81	□□□□□ -1.8
SLC3A2-222	ENST00000546253	RPS28	P62857	69 aa	Known RBP	3.79	□□□□□ -1.8
SLC3A2-222	ENST00000546253	LCE1B	Q5T7P3	118 aa		3.75	□□□□□ -1.81
SLC3A2-222	ENST00000546253		V9GYY9	64 aa		3.74	□□□□□ -1.81
SLC3A2-222	ENST00000546253	PSPHP1	O15172	72 aa		3.73	□□□□□ -1.81
SLC3A2-222	ENST00000546253		Q1T7F1	81 aa		3.72	□□□□□ -1.81
SLC3A2-222	ENST00000546253	SVIP	Q8NHG7	77 aa		3.7	□□□□□ -1.82
SLC3A2-222	ENST00000546253	KRTAP4-2	Q9BYR5	136 aa		3.7	□□□□□ -1.82
SLC3A2-222	ENST00000546253		H3BS24	57 aa		3.62	□□□□□ -1.83
SLC3A2-222	ENST00000546253	LCE1C	Q5T751	118 aa		3.62	□□□□□ -1.83
SLC3A2-222	ENST00000546253	CDC42SE1	Q9NRR8	79 aa		3.61	□□□□□ -1.83
SLC3A2-222	ENST00000546253		A6NED7	52 aa		3.59	□□□□□ -1.83
SLC3A2-222	ENST00000546253	KRTAP4-12	Q9BQ66	201 aa		3.59	□□□□□ -1.83
SLC3A2-222	ENST00000546253	PCP4	P48539	62 aa		3.51	□□□□□ -1.85
SLC3A2-222	ENST00000546253	ROMO1	P60602	79 aa		3.48	□□□□□ -1.85
SLC3A2-222	ENST00000546253	KRTAP5-11	Q6L8G4	156 aa		3.4	□□□□□ -1.87
SLC3A2-222	ENST00000546253	LCE1F	Q5T754	118 aa		3.38	□□□□□ -1.87
SLC3A2-222	ENST00000546253	PHGR1	C9JFL3	82 aa		3.36	□□□□□ -1.87
SLC3A2-222	ENST00000546253	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.2	□□□□□ -1.9
SLC3A2-222	ENST00000546253	BRK1	Q8WUW1	75 aa		3.1	□□□□□ -1.91
SLC3A2-222	ENST00000546253	LCE3D	Q9BYE3	92 aa		3.02	□□□□□ -1.93
SLC3A2-222	ENST00000546253	PMAIP1	Q13794	54 aa		2.93	□□□□□ -1.94
SLC3A2-222	ENST00000546253	KRTAP21-2	Q3LI59	83 aa		2.91	□□□□□ -1.94
SLC3A2-222	ENST00000546253		A0A0A0MQY5	61 aa		2.89	□□□□□ -1.95
SLC3A2-222	ENST00000546253	PRAC1	Q96KF2	57 aa		2.82	□□□□□ -1.96
SLC3A2-222	ENST00000546253	MUC19	Q7Z5P9	8384 aa		2.82	□□□□□ -1.96
SLC3A2-222	ENST00000546253	KRTAP4-4	Q9BYR3	166 aa		2.78	□□□□□ -1.96
SLC3A2-222	ENST00000546253	LCE3E	Q5T5B0	92 aa		2.74	□□□□□ -1.97
SLC3A2-222	ENST00000546253	PRO0628	Q9UI54	55 aa		2.7	□□□□□ -1.98
SLC3A2-222	ENST00000546253	KRTAP21-1	Q3LI58	79 aa		2.57	□□□□□ -2
SLC3A2-222	ENST00000546253	KTN1-AS1	Q86SY8	53 aa		2.57	□□□□□ -2
SLC3A2-222	ENST00000546253	LUZP6	Q538Z0	58 aa		2.37	□□□□□ -2.03
SLC3A2-222	ENST00000546253	NDUFAF8	A1L188	74 aa		2.21	□□□□□ -2.06
SLC3A2-222	ENST00000546253	MUC16	Q8WXI7	14507 aa		1.93	□□□□□ -2.1
SLC3A2-222	ENST00000546253	PRM1	P04553	51 aa		1.76	□□□□□ -2.13
SLC3A2-222	ENST00000546253	INE1	O15225	51 aa		1.52	□□□□□ -2.17

Retrieved 78 of 20,778 RNA–protein pairs in 90.3 ms