RNA–Protein interactions for RNA: ENST00000546026.1

CIT-218, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 3

Gene CIT, Length 677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-218ENST00000546026 SPRR5A0A1B0GTR4 108 aa3.58□□□□□ -1.84
CIT-218ENST00000546026 KRTAP6-3Q3LI67 103 aa3.58□□□□□ -1.84
CIT-218ENST00000546026 LCE3CQ5T5A8 94 aa3.58□□□□□ -1.84
CIT-218ENST00000546026 KRTAP19-3Q7Z4W3 81 aa3.57□□□□□ -1.84
CIT-218ENST00000546026 MT1GP13640 62 aa3.56□□□□□ -1.84
CIT-218ENST00000546026 KRTAP9-7A8MTY7 169 aa3.55□□□□□ -1.84
CIT-218ENST00000546026 SYNE2Q8WXH0 6885 aaKnown RBP3.53□□□□□ -1.84
CIT-218ENST00000546026 LCE5AQ5TCM9 118 aa3.5□□□□□ -1.85
CIT-218ENST00000546026 MT1MQ8N339 61 aa3.49□□□□□ -1.85
CIT-218ENST00000546026 LCE1AQ5T7P2 110 aa3.48□□□□□ -1.85
CIT-218ENST00000546026 KRTAP4-7Q9BYR0 210 aa3.46□□□□□ -1.86
CIT-218ENST00000546026 SPRR2EP22531 72 aa3.45□□□□□ -1.86
CIT-218ENST00000546026 SPRR2BP35325 72 aa3.45□□□□□ -1.86
CIT-218ENST00000546026 SPRR2AP35326 72 aa3.45□□□□□ -1.86
CIT-218ENST00000546026 MUC12Q9UKN1 5478 aa3.45□□□□□ -1.86
CIT-218ENST00000546026 LUZP6Q538Z0 58 aa3.44□□□□□ -1.86
CIT-218ENST00000546026 KRTAP4-3Q9BYR4 195 aa3.38□□□□□ -1.87
CIT-218ENST00000546026 KRTAP9-6A8MVA2 160 aa3.35□□□□□ -1.87
CIT-218ENST00000546026 SPRR2DP22532 72 aa3.33□□□□□ -1.88
CIT-218ENST00000546026 MDN1Q9NU22 5596 aa3.32□□□□□ -1.88
CIT-218ENST00000546026 NDUFAF8A1L188 74 aa3.31□□□□□ -1.88
CIT-218ENST00000546026 NEBP20929 6669 aa3.28□□□□□ -1.89
CIT-218ENST00000546026 KRTAP4-12Q9BQ66 201 aa3.22□□□□□ -1.89
CIT-218ENST00000546026 LCE3BQ5TA77 95 aa3.21□□□□□ -1.9
CIT-218ENST00000546026 DSTQ03001 7570 aaKnown RBP3.2□□□□□ -1.9
CIT-218ENST00000546026 KRTAP2-3P0C7H8 128 aa3.14□□□□□ -1.91
CIT-218ENST00000546026 KRTAP5-5Q701N2 237 aaPredicted RBP3.14□□□□□ -1.91
CIT-218ENST00000546026 KRTAP2-4Q9BYR9 128 aa3.14□□□□□ -1.91
CIT-218ENST00000546026 KRTAP20-1Q3LI63 56 aa3.13□□□□□ -1.91
CIT-218ENST00000546026 KRTAP2-1Q9BYU5 128 aa3.12□□□□□ -1.91
CIT-218ENST00000546026 MT1AP04731 61 aa3.1□□□□□ -1.91
CIT-218ENST00000546026 KRTAP9-9Q9BYP9 154 aa3.1□□□□□ -1.91
CIT-218ENST00000546026 KRTAP9-4Q9BYQ2 154 aa3.1□□□□□ -1.91
CIT-218ENST00000546026 KRTAP2-2Q9BYT5 123 aa3.07□□□□□ -1.92
CIT-218ENST00000546026 KRTAP6-1Q3LI64 71 aa3.04□□□□□ -1.92
CIT-218ENST00000546026 KRTAP5-4Q6L8H1 288 aa3.03□□□□□ -1.92
CIT-218ENST00000546026 LCE1DQ5T752 114 aa3.01□□□□□ -1.93
CIT-218ENST00000546026 LCE4AQ5TA78 99 aa2.99□□□□□ -1.93
CIT-218ENST00000546026 SYNE1Q8NF91 8797 aaKnown RBP2.95□□□□□ -1.94
CIT-218ENST00000546026 A0A0A0MQY5 61 aa2.94□□□□□ -1.94
CIT-218ENST00000546026 KRTAP12-4P60329 112 aa2.94□□□□□ -1.94
CIT-218ENST00000546026 KRTAP4-9Q9BYQ8 210 aa2.91□□□□□ -1.94
CIT-218ENST00000546026 MT4P47944 62 aa2.86□□□□□ -1.95
CIT-218ENST00000546026 H3BS24 57 aa2.85□□□□□ -1.95
CIT-218ENST00000546026 KRTAP4-2Q9BYR5 136 aa2.83□□□□□ -1.96
CIT-218ENST00000546026 MT3P25713 68 aa2.81□□□□□ -1.96
CIT-218ENST00000546026 KRTAP20-2Q3LI61 65 aa2.81□□□□□ -1.96
CIT-218ENST00000546026 KRTAP4-11Q9BYQ6 195 aa2.81□□□□□ -1.96
CIT-218ENST00000546026 KRTAP6-2Q3LI66 62 aa2.8□□□□□ -1.96
CIT-218ENST00000546026 INE1O15225 51 aa2.79□□□□□ -1.96
CIT-218ENST00000546026 GPR98Q8WXG9 6306 aa2.76□□□□□ -1.97
CIT-218ENST00000546026 KRTAP5-2Q701N4 177 aa2.74□□□□□ -1.97
CIT-218ENST00000546026 HMCN1Q96RW7 5635 aa2.72□□□□□ -1.97
CIT-218ENST00000546026 KRTAP5-3Q6L8H2 238 aa2.72□□□□□ -1.97
CIT-218ENST00000546026 LCE3DQ9BYE3 92 aa2.68□□□□□ -1.98
CIT-218ENST00000546026 LCE3EQ5T5B0 92 aa2.62□□□□□ -1.99
CIT-218ENST00000546026 OBSCNQ5VST9 7968 aa2.55□□□□□ -2
CIT-218ENST00000546026 LCE1EQ5T753 118 aa2.47□□□□□ -2.01
CIT-218ENST00000546026 AHNAK2Q8IVF2 5795 aa2.46□□□□□ -2.02
CIT-218ENST00000546026 KRTAP5-10Q6L8G5 202 aa2.45□□□□□ -2.02
CIT-218ENST00000546026 KRTAP5-1Q6L8H4 278 aa2.36□□□□□ -2.03
CIT-218ENST00000546026 KRTAP5-8O75690 187 aa2.35□□□□□ -2.03
CIT-218ENST00000546026 KRTAP5-7Q6L8G8 165 aa2.34□□□□□ -2.03
CIT-218ENST00000546026 LCE1CQ5T751 118 aa2.28□□□□□ -2.04
CIT-218ENST00000546026 LCE1BQ5T7P3 118 aa2.28□□□□□ -2.04
CIT-218ENST00000546026 PRM1P04553 51 aa2.25□□□□□ -2.05
CIT-218ENST00000546026 MUC5ACP98088 5654 aa2.24□□□□□ -2.05
CIT-218ENST00000546026 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.14□□□□□ -2.07
CIT-218ENST00000546026 AHNAKQ09666 5890 aaKnown RBP2.07□□□□□ -2.08
CIT-218ENST00000546026 KRTAP5-11Q6L8G4 156 aa2.01□□□□□ -2.09
CIT-218ENST00000546026 MUC5BQ9HC84 5762 aaPredicted RBP2□□□□□ -2.09
CIT-218ENST00000546026 KRTAP21-2Q3LI59 83 aa2□□□□□ -2.09
CIT-218ENST00000546026 LCE1FQ5T754 118 aa1.85□□□□□ -2.11
CIT-218ENST00000546026 KRTAP4-4Q9BYR3 166 aa1.74□□□□□ -2.13
CIT-218ENST00000546026 PHGR1C9JFL3 82 aa1.72□□□□□ -2.13
CIT-218ENST00000546026 MUC19Q7Z5P9 8384 aa1.47□□□□□ -2.17
CIT-218ENST00000546026 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.19
CIT-218ENST00000546026 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 70.7 ms