RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 MUC12Q9UKN1 5478 aa4.98□□□□□ -1.61
SCARB1-209ENST00000545305 MT1LQ93083 61 aa4.92□□□□□ -1.62
SCARB1-209ENST00000545305 KRTAP20-1Q3LI63 56 aa4.88□□□□□ -1.63
SCARB1-209ENST00000545305 KRTAP19-3Q7Z4W3 81 aa4.88□□□□□ -1.63
SCARB1-209ENST00000545305 KRTAP19-4Q3LI73 84 aa4.87□□□□□ -1.63
SCARB1-209ENST00000545305 SPRR2EP22531 72 aa4.85□□□□□ -1.63
SCARB1-209ENST00000545305 SPRR2BP35325 72 aa4.85□□□□□ -1.63
SCARB1-209ENST00000545305 SPRR2AP35326 72 aa4.85□□□□□ -1.63
SCARB1-209ENST00000545305 MT1GP13640 62 aa4.83□□□□□ -1.64
SCARB1-209ENST00000545305 LCE1AQ5T7P2 110 aa4.82□□□□□ -1.64
SCARB1-209ENST00000545305 LCE3CQ5T5A8 94 aa4.79□□□□□ -1.64
SCARB1-209ENST00000545305 LCE5AQ5TCM9 118 aa4.78□□□□□ -1.64
SCARB1-209ENST00000545305 MDN1Q9NU22 5596 aa4.77□□□□□ -1.65
SCARB1-209ENST00000545305 MT1MQ8N339 61 aa4.76□□□□□ -1.65
SCARB1-209ENST00000545305 KRTAP2-3P0C7H8 128 aa4.72□□□□□ -1.65
SCARB1-209ENST00000545305 KRTAP2-4Q9BYR9 128 aa4.72□□□□□ -1.65
SCARB1-209ENST00000545305 KRTAP4-7Q9BYR0 210 aa4.7□□□□□ -1.66
SCARB1-209ENST00000545305 SPRR2DP22532 72 aa4.68□□□□□ -1.66
SCARB1-209ENST00000545305 SPRR5A0A1B0GTR4 108 aa4.64□□□□□ -1.67
SCARB1-209ENST00000545305 KRTAP4-3Q9BYR4 195 aa4.62□□□□□ -1.67
SCARB1-209ENST00000545305 KRTAP2-2Q9BYT5 123 aa4.56□□□□□ -1.68
SCARB1-209ENST00000545305 KRTAP2-1Q9BYU5 128 aa4.56□□□□□ -1.68
SCARB1-209ENST00000545305 LUZP6Q538Z0 58 aa4.5□□□□□ -1.69
SCARB1-209ENST00000545305 LCE3BQ5TA77 95 aa4.48□□□□□ -1.69
SCARB1-209ENST00000545305 KRTAP9-6A8MVA2 160 aa4.47□□□□□ -1.69
SCARB1-209ENST00000545305 DSTQ03001 7570 aaKnown RBP4.45□□□□□ -1.7
SCARB1-209ENST00000545305 LOC100996750A0A140TA64 210 aa4.42□□□□□ -1.7
SCARB1-209ENST00000545305 KRTAP5-5Q701N2 237 aaPredicted RBP4.27□□□□□ -1.73
SCARB1-209ENST00000545305 GPR98Q8WXG9 6306 aa4.25□□□□□ -1.73
SCARB1-209ENST00000545305 NDUFAF8A1L188 74 aa4.24□□□□□ -1.73
SCARB1-209ENST00000545305 MT1AP04731 61 aa4.2□□□□□ -1.74
SCARB1-209ENST00000545305 LCE4AQ5TA78 99 aa4.15□□□□□ -1.75
SCARB1-209ENST00000545305 KRTAP5-4Q6L8H1 288 aa4.15□□□□□ -1.75
SCARB1-209ENST00000545305 KRTAP6-1Q3LI64 71 aa4.13□□□□□ -1.75
SCARB1-209ENST00000545305 KRTAP4-9Q9BYQ8 210 aa4.1□□□□□ -1.75
SCARB1-209ENST00000545305 KRTAP12-4P60329 112 aa4.06□□□□□ -1.76
SCARB1-209ENST00000545305 MT4P47944 62 aa4.04□□□□□ -1.76
SCARB1-209ENST00000545305 KRTAP9-4Q9BYQ2 154 aa3.99□□□□□ -1.77
SCARB1-209ENST00000545305 LCE1DQ5T752 114 aa3.98□□□□□ -1.77
SCARB1-209ENST00000545305 SYNE1Q8NF91 8797 aaKnown RBP3.98□□□□□ -1.77
SCARB1-209ENST00000545305 KRTAP4-6Q9BYQ5 205 aa3.95□□□□□ -1.78
SCARB1-209ENST00000545305 HMCN1Q96RW7 5635 aa3.91□□□□□ -1.78
SCARB1-209ENST00000545305 KRTAP20-2Q3LI61 65 aa3.9□□□□□ -1.79
SCARB1-209ENST00000545305 AHNAK2Q8IVF2 5795 aa3.89□□□□□ -1.79
SCARB1-209ENST00000545305 KRTAP6-2Q3LI66 62 aa3.84□□□□□ -1.79
SCARB1-209ENST00000545305 KRTAP5-10Q6L8G5 202 aa3.84□□□□□ -1.79
SCARB1-209ENST00000545305 MT3P25713 68 aa3.82□□□□□ -1.8
SCARB1-209ENST00000545305 A0A0A0MQY5 61 aa3.75□□□□□ -1.81
SCARB1-209ENST00000545305 KRTAP5-2Q701N4 177 aa3.75□□□□□ -1.81
SCARB1-209ENST00000545305 KRTAP5-3Q6L8H2 238 aa3.74□□□□□ -1.81
SCARB1-209ENST00000545305 KRTAP5-7Q6L8G8 165 aa3.73□□□□□ -1.81
SCARB1-209ENST00000545305 H3BS24 57 aa3.59□□□□□ -1.83
SCARB1-209ENST00000545305 LCE3DQ9BYE3 92 aa3.59□□□□□ -1.83
SCARB1-209ENST00000545305 INE1O15225 51 aa3.53□□□□□ -1.84
SCARB1-209ENST00000545305 LCE3EQ5T5B0 92 aa3.48□□□□□ -1.85
SCARB1-209ENST00000545305 OBSCNQ5VST9 7968 aa3.48□□□□□ -1.85
SCARB1-209ENST00000545305 KRTAP4-11Q9BYQ6 195 aa3.41□□□□□ -1.86
SCARB1-209ENST00000545305 LCE1EQ5T753 118 aa3.34□□□□□ -1.87
SCARB1-209ENST00000545305 KRTAP5-8O75690 187 aa3.27□□□□□ -1.89
SCARB1-209ENST00000545305 AHNAKQ09666 5890 aaKnown RBP3.24□□□□□ -1.89
SCARB1-209ENST00000545305 KRTAP5-1Q6L8H4 278 aa3.24□□□□□ -1.89
SCARB1-209ENST00000545305 MUC5ACP98088 5654 aa3.22□□□□□ -1.89
SCARB1-209ENST00000545305 MUC5BQ9HC84 5762 aaPredicted RBP3.21□□□□□ -1.9
SCARB1-209ENST00000545305 LCE1BQ5T7P3 118 aa3.14□□□□□ -1.91
SCARB1-209ENST00000545305 KRTAP9-9Q9BYP9 154 aa3.13□□□□□ -1.91
SCARB1-209ENST00000545305 LCE1CQ5T751 118 aa3.09□□□□□ -1.91
SCARB1-209ENST00000545305 KRTAP4-2Q9BYR5 136 aa3.09□□□□□ -1.91
SCARB1-209ENST00000545305 PRM1P04553 51 aa2.96□□□□□ -1.94
SCARB1-209ENST00000545305 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.88□□□□□ -1.95
SCARB1-209ENST00000545305 KRTAP5-11Q6L8G4 156 aa2.76□□□□□ -1.97
SCARB1-209ENST00000545305 KRTAP21-2Q3LI59 83 aa2.69□□□□□ -1.98
SCARB1-209ENST00000545305 KRTAP4-12Q9BQ66 201 aa2.61□□□□□ -1.99
SCARB1-209ENST00000545305 LCE1FQ5T754 118 aa2.53□□□□□ -2
SCARB1-209ENST00000545305 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
SCARB1-209ENST00000545305 PHGR1C9JFL3 82 aa2.36□□□□□ -2.03
SCARB1-209ENST00000545305 MUC19Q7Z5P9 8384 aa2.04□□□□□ -2.08
SCARB1-209ENST00000545305 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
SCARB1-209ENST00000545305 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 15.4 ms