RNA–Protein interactions for RNA: ENST00000545247.6

TSG101-210, Transcript of tumor susceptibility 101, humanhuman

TSL 3

Gene TSG101, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSG101-210ENST00000545247 TMEM258P61165 79 aa6.67□□□□□ -1.34
TSG101-210ENST00000545247 LINC01558Q9Y6Z2 57 aa6.65□□□□□ -1.34
TSG101-210ENST00000545247 LCE3AQ5TA76 89 aa6.64□□□□□ -1.35
TSG101-210ENST00000545247 C10orf95Q9H7T3 257 aa6.64□□□□□ -1.35
TSG101-210ENST00000545247 KRTAP5-4Q6L8H1 288 aa6.63□□□□□ -1.35
TSG101-210ENST00000545247 KRTAP4-6Q9BYQ5 205 aa6.59□□□□□ -1.35
TSG101-210ENST00000545247 AHNAK2Q8IVF2 5795 aa6.59□□□□□ -1.36
TSG101-210ENST00000545247 TNP1P09430 55 aa6.57□□□□□ -1.36
TSG101-210ENST00000545247 KRTAP5-10Q6L8G5 202 aa6.54□□□□□ -1.36
TSG101-210ENST00000545247 UQCR11O14957 56 aa6.53□□□□□ -1.36
TSG101-210ENST00000545247 KRTAP4-7Q9BYR0 210 aa6.47□□□□□ -1.37
TSG101-210ENST00000545247 MIR22HGQ0VDD5 57 aa6.37□□□□□ -1.39
TSG101-210ENST00000545247 KRTAP12-3P60328 96 aa6.36□□□□□ -1.39
TSG101-210ENST00000545247 V9GYY9 64 aa6.35□□□□□ -1.39
TSG101-210ENST00000545247 KRTAP5-3Q6L8H2 238 aa6.34□□□□□ -1.39
TSG101-210ENST00000545247 K7ERS5 55 aa6.33□□□□□ -1.4
TSG101-210ENST00000545247 KRTAP5-7Q6L8G8 165 aa6.31□□□□□ -1.4
TSG101-210ENST00000545247 KRTAP20-2Q3LI61 65 aa6.29□□□□□ -1.4
TSG101-210ENST00000545247 PSPHP1O15172 72 aa6.26□□□□□ -1.41
TSG101-210ENST00000545247 KRTAP5-5Q701N2 237 aaPredicted RBP6.26□□□□□ -1.41
TSG101-210ENST00000545247 Q1T7F1 81 aa6.24□□□□□ -1.41
TSG101-210ENST00000545247 KRTAP25-1Q3LHN0 102 aa6.21□□□□□ -1.42
TSG101-210ENST00000545247 SPRR5A0A1B0GTR4 108 aa6.2□□□□□ -1.42
TSG101-210ENST00000545247 LOC100996750A0A140TA64 210 aa6.14□□□□□ -1.43
TSG101-210ENST00000545247 KRTAP12-4P60329 112 aa6.14□□□□□ -1.43
TSG101-210ENST00000545247 A6NED7 52 aa6.1□□□□□ -1.43
TSG101-210ENST00000545247 SYNE1Q8NF91 8797 aaKnown RBP6.07□□□□□ -1.44
TSG101-210ENST00000545247 KRTAP23-1A1A580 65 aa5.97□□□□□ -1.45
TSG101-210ENST00000545247 CDC42SE1Q9NRR8 79 aa5.96□□□□□ -1.46
TSG101-210ENST00000545247 RPS28P62857 69 aaKnown RBP5.94□□□□□ -1.46
TSG101-210ENST00000545247 KRTAP19-4Q3LI73 84 aa5.91□□□□□ -1.46
TSG101-210ENST00000545247 PCP4P48539 62 aa5.89□□□□□ -1.47
TSG101-210ENST00000545247 KRTAP15-1Q3LI76 137 aa5.84□□□□□ -1.47
TSG101-210ENST00000545247 LCE3CQ5T5A8 94 aa5.83□□□□□ -1.48
TSG101-210ENST00000545247 ROMO1P60602 79 aa5.82□□□□□ -1.48
TSG101-210ENST00000545247 KRTAP4-11Q9BYQ6 195 aa5.81□□□□□ -1.48
TSG101-210ENST00000545247 KRTAP5-2Q701N4 177 aa5.76□□□□□ -1.49
TSG101-210ENST00000545247 KRTAP6-1Q3LI64 71 aa5.75□□□□□ -1.49
TSG101-210ENST00000545247 MT1AP04731 61 aa5.73□□□□□ -1.49
TSG101-210ENST00000545247 KRTAP5-8O75690 187 aa5.62□□□□□ -1.51
TSG101-210ENST00000545247 KRTAP9-4Q9BYQ2 154 aa5.58□□□□□ -1.52
TSG101-210ENST00000545247 KRTAP9-6A8MVA2 160 aa5.55□□□□□ -1.52
TSG101-210ENST00000545247 KRTAP6-2Q3LI66 62 aa5.54□□□□□ -1.52
TSG101-210ENST00000545247 OBSCNQ5VST9 7968 aa5.48□□□□□ -1.53
TSG101-210ENST00000545247 MUC5ACP98088 5654 aa5.47□□□□□ -1.53
TSG101-210ENST00000545247 AHNAKQ09666 5890 aaKnown RBP5.45□□□□□ -1.54
TSG101-210ENST00000545247 MUC5BQ9HC84 5762 aaPredicted RBP5.44□□□□□ -1.54
TSG101-210ENST00000545247 KRTAP9-9Q9BYP9 154 aa5.36□□□□□ -1.55
TSG101-210ENST00000545247 BRK1Q8WUW1 75 aa5.28□□□□□ -1.56
TSG101-210ENST00000545247 MT3P25713 68 aa5.25□□□□□ -1.57
TSG101-210ENST00000545247 KRTAP5-1Q6L8H4 278 aa5.23□□□□□ -1.57
TSG101-210ENST00000545247 PMAIP1Q13794 54 aa4.95□□□□□ -1.62
TSG101-210ENST00000545247 LCE1EQ5T753 118 aa4.87□□□□□ -1.63
TSG101-210ENST00000545247 KRTAP4-12Q9BQ66 201 aa4.84□□□□□ -1.63
TSG101-210ENST00000545247 PRAC1Q96KF2 57 aa4.71□□□□□ -1.66
TSG101-210ENST00000545247 KRTAP4-2Q9BYR5 136 aa4.67□□□□□ -1.66
TSG101-210ENST00000545247 LCE1BQ5T7P3 118 aa4.66□□□□□ -1.66
TSG101-210ENST00000545247 PRO0628Q9UI54 55 aa4.58□□□□□ -1.68
TSG101-210ENST00000545247 LCE1CQ5T751 118 aa4.53□□□□□ -1.68
TSG101-210ENST00000545247 KTN1-AS1Q86SY8 53 aa4.4□□□□□ -1.71
TSG101-210ENST00000545247 SVIPQ8NHG7 77 aa4.28□□□□□ -1.72
TSG101-210ENST00000545247 LCE3DQ9BYE3 92 aa4.16□□□□□ -1.74
TSG101-210ENST00000545247 KRTAP5-11Q6L8G4 156 aa4.13□□□□□ -1.75
TSG101-210ENST00000545247 LUZP6Q538Z0 58 aa4.1□□□□□ -1.75
TSG101-210ENST00000545247 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.08□□□□□ -1.76
TSG101-210ENST00000545247 LCE1FQ5T754 118 aa4.06□□□□□ -1.76
TSG101-210ENST00000545247 LCE3EQ5T5B0 92 aa3.92□□□□□ -1.78
TSG101-210ENST00000545247 PHGR1C9JFL3 82 aa3.82□□□□□ -1.8
TSG101-210ENST00000545247 KRTAP21-2Q3LI59 83 aa3.79□□□□□ -1.8
TSG101-210ENST00000545247 H3BS24 57 aa3.66□□□□□ -1.82
TSG101-210ENST00000545247 KRTAP4-4Q9BYR3 166 aa3.55□□□□□ -1.84
TSG101-210ENST00000545247 MUC19Q7Z5P9 8384 aa3.4□□□□□ -1.87
TSG101-210ENST00000545247 NDUFAF8A1L188 74 aa3.21□□□□□ -1.9
TSG101-210ENST00000545247 PRM1P04553 51 aa2.97□□□□□ -1.93
TSG101-210ENST00000545247 KRTAP21-1Q3LI58 79 aa2.88□□□□□ -1.95
TSG101-210ENST00000545247 A0A0A0MQY5 61 aa2.87□□□□□ -1.95
TSG101-210ENST00000545247 INE1O15225 51 aa2.62□□□□□ -1.99
TSG101-210ENST00000545247 MUC16Q8WXI7 14507 aa2.44□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 88.1 ms